ChIP-Atlas: Target genes

Potential target genes for HDAC4

Query protein: HDAC4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX13466116 | SK-UT-1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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HDAC4's Target genes

◢ HDAC4: Average

◢ SRX2140208: MM.1S

◢ SRX8213853: SK-LMS-1

◢ SRX11525509: SK-UT-1

◢ SRX11525512: SK-UT-1

◢ SRX13466113: SK-UT-1

◣ SRX13466116: SK-UT-1

◢ SRX6054277: SK-UT-1

◢ HDAC4: STRING

SPATC1L
SP2
TNFRSF19
FEM1A
UCKL1
DNM2
IFRD2
PAFAH2
UNK
CLPB
RWDD1
H4C15
H4C14
H4C3
BOD1
AP2S1
CHMP4B
SLC25A25
NAIF1
MMACHC
CCDC163
DDX49
COPE
PHB
EVI5L
CALCOCO1
TCEA2
RFX1
FBXL19
H4C11
RAB5B
PES1
PHF12
KHSRP
RBBP5
ANKHD1-EIF4EBP3
ANKHD1
ADAMTSL1
CIC
SUCLG1
BANP
VTI1B
DFFA
PEMT
GTF2H4
CALR3
C19orf44
SP1
HIKESHI
MRPL24
YJU2
WDR74
RPS7
REXO1
IFTAP
ZNF225
FASTKD1
SYMPK
FOXA3
SUPV3L1
TXNRD1
SLX1B
SLX1A
BOLA2B
BOLA2
C19orf48
WDPCP
MDH1
SCRIB
OSBP
POLR3F
DZANK1
C16orf91
PNKD
AAMP
NUP205
SMPD3
VPS50
HEPACAM2
ING4
TSNAXIP1
RANBP10
NLK
CACTIN
GSPT1
PRCC
SLC35B1
TMEM115
AURKAIP1
POLR2E
H2BC4
RNASEH2A
H2AC6
SCNM1
LYSMD1
INTS9
HMBOX1
CAPN15
TBL3
TOM1L2
DRC3
THOC6
HCFC1R1
NEBL
POLDIP3
SLC35E2B
PNPLA6
IPO13
PAK1IP1
C6orf52
RBL1
ZNF547
TRAPPC2B
ZNF165
VIPAS39
AHSA1
UBQLN4
LAMTOR2
MAPKAPK5
NCLN
UFSP2
ORMDL3
VCPIP1
C8orf44-SGK3
OAZ3
MRPL9
MRPL21
IGHMBP2
ZFYVE1
SSR3
GALM
BOLA2-SMG1P6
TSN
ZNF268
RANBP2
DSTYK
STT3A
SCAF1
ZNF687
PSMD11
SART3
ISCU
RPIA
SEC61B
ALG2
HNRNPL
KAT6B
ZNF383
USP48
INVS
ERP44
LMAN2
ZNF444
BUB1B
NUP153
TSC2
NTHL1
CCDC90B
SUPT7L
SLC4A1AP
RPS20
PCBP1
CCAR2
TMEM94
THRAP3
TMEM208
LRRC29
NMT1
DCAKD
CCP110
H4C2
RPL32
PPP1R12B
PRRG2
NOSIP
TFPT
PRPF31
DYNC1I2
LARS1
ZNF235
SIRT4
ZNF576
IRGQ
DDX23
TBL1X
COMMD1
CCT4
ING3
ZNF691
ZNF143
TSNAX
MRPS7
GGA3
COPS8
ELOC
ZNF335
TMEM160
FLOT1
HNRNPC
STAM
PRR14
C1orf159
NDUFS7
MICOS13
HSD11B1L
VEZT
FGD6
NUF2
EXOSC5
BCKDHA
RTEL1
UBAC1
RBM42
GET3
SESN1
CEP57L1
CWC25
FARSB
KRR1
SUDS3
MTOR
SF3A3
LYRM4
FARS2
ZNF749
RPS27A
CLHC1
NDUFS3
KBTBD4
RNF121
LOC100133315
STAM2
PEAK1
HMG20A
DYNC2I2
RAB11B
TACO1
STK36
RNF25
SIRT2
NFKBIB
PRORP
PPP2R3C
TRMO
NDUFA10
LRCH4
FBXO24
PPRC1
H4C8
TBCK
AIMP1
C19orf53
LSG1
TIMM21
FBXO15
TEPSIN
NDUFAF8
PSMD1
PABPN1
KATNB1
ISY1-RAB43
ISY1
ZBTB45
SLC25A19
ZSCAN22
G3BP1
MTR
GOSR2
SF3B3
COG4
ADPRS
PNN
UQCRC2
PTGES2
FLAD1
CCDC174
RPL9
LIAS
TM9SF4
PSMC5
FTSJ3
TCF3
EFTUD2
CCDC103
TRAF7
UBE2I
ZNF605
RPGRIP1L
FTO
ASXL1
MTBP
MRPL13
SF3B5
NEDD8-MDP1
NEDD8
GMPR2
JOSD2
NR6A1
DDX39B
H2AC19
H2AC18
NDUFB3
FAM126B
ZFYVE19
DNAJC17
AP2M1
RABAC1
ZNF140
ACTR1A
SUFU
H4C5
NPRL2
CYB561D2
UTP11
SLC39A9
ERH
ATG101
HDAC9
SREK1IP1
CWC27
BMERB1
KEAP1
TMEM60
PHTF2
INO80B
PPP6R1
RPS3
ABCF2
XPNPEP3
ST13
SSU72
UFD1
CDC45
HSPA9
ADO
NDC80
METTL4
HEXIM2
TATDN3
NSL1
VPS52
RPS18
HNRNPUL1
CHMP2A
U2SURP
TSSC4
GSK3A
CNPY2
NME6
HBP1
EIF4A1
ITGB3BP
EFCAB7
ZNF614
WDR46
PFDN6
SPSB3
CAND1
RPL35A
IQCG
SUGP1
MAU2
CTDP1
MRPL53
SLC8A1
MRPS23
ZSCAN5A
RPL37
SNRPB
PSMB5
NFX1
KMT5C
COMMD2
PARP2
MRPS11
MRPL46
SNX16
SNRPD3
GUCD1
PI4KB
MGRN1
MTRNR2L2
MTRNR2L8
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
H4C12
FAP
ST3GAL2
SF3B6
FAM228B
RGPD2
RGPD1
FAM168A
NUDCD1
ZNF17
CCDC146
GPR137
GPR108
SNX17
EIF2B4
GBA
CRTC2
BMF
PIN4
GATB
SSBP1
SP5
CYCS
HRCT1
STIP1
AK2
NUP107
COMMD9
MTRNR2L9
COX16
ALKBH7
KHDC4
ZNF417
SPHK2
RPL18
CNIH4
EHF
E2F4
PANK4
UBR2
ZC3H10
TRDMT1
PIGL
ANAPC5
SEC11C
DDX41
KBTBD6
TMTC3
CEP290
SMG8
METTL3
STX16
NUCB1
LIN37
EIF3F
SRSF11
LRRC40
INTS1
MED27
AHCYL2
NME1-NME2
NME1
SLX4IP
TTI2
PWWP2A
TMEM242
ZSWIM3
ACOT8
DCAF7
CDK5RAP2
EIF2AK3
ZFPL1
CDCA5
COX7C
NUDT13
NFIB
TBC1D10B
RPL27
PSMB6
MYLPF
TCERG1
MTRNR2L10
ATP5F1B
ZMAT2
GTF3C3
VWA5A
PHB2
BUB3
KRT15
CLN3
RPS6KB2
ZNF337
C12orf43
MRPL28
SEL1L
PPP5D1
CALM3
BABAM1
ZNF384
SHPK
CTNS
NOC4L
NDUFAF5
ESF1
DDX51
NDUFB5
MRPL47
C1orf109
MITD1
RHOT2
KMT2B
ZNF500
CTU1
ZNF776
EXOC4
EXD2
SMARCAL1
PPP1R12C
ARHGEF1
SRD5A1
EMC4
TRIP4
RPL18A
KRT23
SEC13
COPS7A
GSTO2
VPS25
TOP2A
SMARCD2
SELENOH
DLGAP1
DHX8
RPAIN
NUP88
CD2BP2
NOP16
HIGD2A
SSBP2
MRPS18C
HELQ
CIAO2A
BPNT1
SMAD3
EPS15
CRADD
FBXW11
INO80C
COPS7B
ATP5MG
CCNL1
ZNF211
SYT7
MTMR9
CAPS2
USP30
RCAN1
KLLN
CCL3
MARS1
ARHGAP9
H4C4
DMAC1
MTRF1
INTS10
ZCCHC4
MYOM2
TPRKB
MAF1
METTL26
LTN1
STK25
GABPB2
ZNF688
XAB2
GUF1
TOMM40L
ARHGEF2
TBP
PSMB1
ZNF420
ZCCHC8
TRAPPC9
VARS1
VRK1
FCF1
AREL1
TOR1AIP1
GORAB
PLEKHM3
CCDC124
RPS23
ATP6AP1L
LTA4H
HEMK1
ZNF628
NR1H3
ACP2
API5
RPL21
NFATC2IP
ABT1
TJP3
NVL
ZC3H6
PROSER3
HSPB6
ZNF286A
UTP3
RBM28
THAP1
MDM2
ENPP4
EIF4A3
CLIC5
CGGBP1
ACTL6A
NMNAT1
LZIC
ALKBH3
ZSCAN32
ZNF174
ZNF548
LNPEP
ATP6V1G1
ATP2C1
PEX3
ADAT2
KLF6
TMEM256
CENPA
RPL14
MED24
FUT10
CCDC59
TMEM63C
RAB5C
RAP2B
PRDM15
CCL5
TXNL4B
TIMMDC1
DHX38
ALG10B
SMCO1
CXCR5
MPV17L2
MCAT
DPP9
CNOT1
TPGS1
PEX26
ZNF56
RTRAF
RTF2
KCTD5
MTRNR2L1
ILF2
NCOA7
KANSL3
PDE6D
TTC33
TRMT10C
TGIF1
COX7A2L
TRAPPC3
USP3
UBC
SKA2
PRR11
DRAP1
C11orf68
HEXA
FSD2
BBX
NDUFC2-KCTD14
NDUFC2
KMT2C
HOOK1
MED23
MAP2K3
CELF3
SLC33A1
ZNF608
CMSS1
BTRC
LAMP1
EML2
DOLPP1
LRRC14B
GCLC
FMO4
DHX33
AQR
AP1G1
MNT
POLG
MRM3
GLOD4
SNX15
MRPL1
DCP1B
C2orf42
HSD11B1
INSR
PXMP2
POLE
FAAP24
CEP89
TPST1
RPS13
IFIT1
TP63
LAS1L
CCDC77
ZNF26
WBP1L
MRPL20
LUC7L2
FMC1-LUC7L2
FMC1
CDC20
ZNF451
WAPL
GALK2
COPS2
TYK2
SMG5
PSMD4
KDSR
TLR5
TIMM22
SMARCE1
RAD51AP1
NR1H2
MPND
C12orf4
UBB
RBM25
PRPF18
WDR83OS
WDR83
TUT1
TMX2
SPTLC3
MED19
KIF16B
FDPS
ZNF609
ZBTB38
EPRS1
ZNF565
ZNF146
SCYL3
MRPL44
ZNF552
RAP2A
GEMIN6
CRB1
C16orf72
KIF22
COPZ1
ARNTL
ZMYND8
SPC25
RAD51AP2
FOS
ZNF226
SAP30BP
RECQL5
FAM156B
FAM156A
NFKBIL1
MYCBP2
ATP6V1G2
NCDN
MFAP3L
KIAA0319L
CDK8
ATP5MC2
TSC1
TDRKH
RPL29
RAB40B
GFI1B
DVL2
ZNF584
ZNF419
RANGAP1
RABL2A
MAMSTR
FOXP2
DHX16
WBP2
KLHL20
CLEC7A
SART1
ATG4C
ACBD4
UNC93B1
STOML2
MED6
RARB
HAX1
C3orf38
ATXN2L
CYP2R1
TMEM109
SNAPC3
IFI44L
DDR2
TLDC2
CSTF1
AURKA
SH3GL1
GABARAP
PSAP
NDUFAB1
NDUFA2
IK
ECT2
TOMM40
TFB2M
KCNN3
FBXW9
DDI2
CNST
ZSWIM1
ZNF668
ZNF646
SLMAP
HIRIP3
CHD6
TAF6
PNISR
IDH3B
DESI2
CNPY4
ASB4
ABCB8
PPP1R37
GPR89A
GOLPH3L
FAM207A
ADRM1
PPIL3
NSMCE3
NIF3L1
ITGB1BP1
IFT27
CPSF3
ZBTB5
TMEM218
RPS12
CDC23
ARL1
TTC21A
GORASP1
AP3S2
AMOTL2
VPS4B
UBQLN1
SOD1
CEP128
SACM1L
CWC22
MAPK14
TMED10
NSA2
NCBP2AS2
NCBP2
GFM2
WDR36
SNAP47
OSBPL2
NBEAL2
NAA35
JMJD4
DUS3L
RNF43
RFC4
PTBP1
PRMT1
MRPS15
DPH2
DMAP1
CDKN2D
ZNF112
ZMPSTE24
THADA
NUCKS1
NGDN
ISOC2
FRYL
EHMT2
CLEC16A
CCDC61
C2
SPNS1
POLR2J3
FBXO8
CEP44
UBE2T
TAF3
PTCD3
POLR1A
NDUFAF1
MVB12A
GTF2H2C_2
GTF2H2C
DNAJC14
DCP1A
C10orf143
NUP214
NOLC1
LOC101927572
CCNC
C12orf73
ALKBH6
ZNF570
RPS26
PGP
OPA3
NOXA1
MORC3
HARBI1
GGCT
DAPK3
ATG13
PRKCI
LY9
HSPA13
EIF4A2
BCAS2
ZNF571
ZNF540
TMEM101
SH3BP4
RPL26
RNF187
PDE12
LRRC45
CENPX
TPD52L2
TNFRSF17
PRICKLE4
NPIPB2
KAT7
INTS4
FRS3
C12orf57
BET1
TDP2
SPAG7
RPS27
RER1
MORN1
FLT3LG
ACOT13
TRAPPC6A
TLR4
RBM6
N4BP2L2
GTPBP3
FDXR
EXOSC4
BLOC1S3
B4GALT5
ANKRD40
ZC3HC1
UCHL5
TRNAU1AP
TRMT2A
TIPRL
RO60
RANBP1
KLHDC10
KDM4D
KAT6A
DARS2
CWC15
CENPL
PSMD5
MLLT1
KNL1
KCNH1
ZNF76
TIMM13
SLC4A2
RPA2
RBSN
RABEP1
NOP53
MRPL54
CREM
CHD8
CDK5
APBA3
UQCRH
TSACC
LRRC41
FBXO38
CXXC1
CCT3
RABL2B
RAB11A
WDR53
WASF1
SPRY1