ChIP-Atlas: Target genes

Potential target genes for MSX2

Query protein: MSX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: MSX2 | Average
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
MSX2's Target genes

◣ MSX2: Average

◢ SRX10478468: MCF-7

◢ SRX10478469: MCF-7

◢ SRX10003070: Trophoblast stem cells

◢ SRX10003071: Trophoblast stem cells

◢ SRX10003072: Trophoblast stem cells

◢ MSX2: STRING

DUX4
PALM2AKAP2
RBL2
STK32C
LRRC27
PSG5
PSG9
ARHGAP5
PLA2G4D
SNX32
PSG1
CDADC1
SMARCC2
MKLN1
NDST1
WDR74
STX5
PSG11
SLC5A10
MTRNR2L8
ALOX5AP
BACH2
SLC6A4
EAPP
TNFRSF19
GLG1
MESP2
EXOSC2
RNF43
NEDD9
WWP1
NIPSNAP1
PSG7
GTF2A2
DOT1L
AP3D1
WDR93
PEX11A
PARP16
MTRNR2L1
HSD17B4
LYN
ADAM17
PSG3
PSG8
MTRNR2L2
MSH3
DHFR
FRG2C
HEG1
SIRT4
CCDC141
YTHDF1
ZDHHC1
TMEM52B
OLR1
RAB17
CDH1
SPNS2
ITGAM
EPS15L1
SERBP1
PPP1R14D
ETV3
SIX2
ANKRD23
FABP7
PSG4
LRP2
TXNRD1
COL23A1
BCL2L13
ATP6V1E1
SLBP
ART1
CRPPA
MTDH
PPP1R2
MYOCD
IFNAR1
KRTAP2-2
KRTAP2-1
KRTAP1-1
GTPBP4
YWHAE
DPEP2
ATP2B1
ID1
SLC25A44
HCAR3
HCAR2
MYEOV
FAM110A
C9
PIWIL3
KIAA1191
TAGLN2
LYRM1
DCUN1D3
TFF1
RABGGTB
SNRPE
TMTC2
OR10V1
C1QTNF6
KRTAP3-2
KRTAP3-1
MIS12
DERL2
CENPX
SH3BP4
PATJ
TMCC1
C18orf21
SLC10A6
NAGLU
SOX9
HROB
HDAC5
GSTO1
ENTPD1
FKBP1A
ANKRD40CL
SLCO2A1
PSPN
ALKBH7
RYK
ENPEP
TPD52
COLEC12
SLC7A4
ADGRG3
EBAG9
MS4A2
TRUB1
KRT1
FRY
CAMSAP3
FRG2
PKIB
SGK3
TMEM107
BACE1
DNAJC15
ADH4
SEC23A
GEMIN2
NR4A1
ADAM10
PHLDB2
RASA2
SEMA6A
ALG10B
ANKRD1
GALNT11
AMN1
POLD4
PISD
LTBP2
IRAG1
TAS2R41
ZBED1
DHRSX
CCDC81
COMMD8
TMEM270
MAPK10
PTK2B
NCOA3
HECTD1
SLC7A6
TMEM141
ALPP
SLN
HEXB
MEST
CHI3L2
SDC1
PRR5
UPK1A
ABLIM1
ZNF740
CSAD
CDK19
AMD1
ZNF444
CDC42SE2
IRF8
SFXN5
LATS2
EFNA1
RARS1
TMED10
LNX1
USP6NL
METTL27
ARHGEF18
LOC105378979
ZNF341
PXMP4
RNF126
FSTL3
PLEKHM3
IKZF3
UBE4B
KIF5C
ASAH1
SLC7A2
RXRA
SLC19A3
QPCT
LIMS4
LIMS3
BAMBI
ALS2
GPRC5A
GCM1
TAF12
OSBP
CFAP45
EHF
FDFT1
LIMS1
RSAD2
UBE2J1
GTPBP6
PRKRIP1
IL10RB
DPRX
DLG2
IL1R1
FAM89A
OLFML1
FOCAD
PCOLCE2
PRKCZ
UHRF1BP1L
SYBU
SH3YL1
ACP1
KRT8
SEC22B
TSPAN10
NPLOC4
ACSS1
SLC45A4
VPS37C
TXNDC2
IGSF22
CD55
EID2B
EID2
UBXN11
SLMAP
SLC7A7
MRPL52
TCF15
SLC2A8
GLIS3
TRMT9B
NTAN1
FGD3
DNMT1
METTL21A
TGFBR1
ID3
SLC18A1
SH2D4A
PTBP3
BAHCC1
PHRF1
SLC30A1
FBXW8
PGS1
CXADR
PET117
KAT14
ZNF474
TMEM88B
KRT19
ANKRD65
SEC11A
KMT2E
HNRNPA0
ANO6
TRPM6
TLK1
IL34
TMEM245
PTTG1IP
MRPS23
ZNF749
MIDEAS
RLBP1
FAM151B
ZNF362
TNS3
ZNF331
SMIM15
PTPN1
TAF6
CNPY4
ATP6AP2
SPG7
SLC15A2
CCR5
TTC23L
CCSAP
CTPS1
ZNF592
NCBP3
EIF2AK4
AMOTL1
ELF5
VWA3B
TBX2
FGD4
ZNF343
IFNL4
IFNL2
PSG2
GINS1
ABHD12
TMEM212
CHST6
FZD6
PKP2
ZNF407
LSM14A
BCAS4
LOC102724770
DGCR6
CLTC
SLC44A1
PACSIN2
NIBAN2
LDLR
DHCR24
ZNF503
NAV2
HMOX1
ACER3
ACVR1
NKX2-3
KRT71
EYA3
TACC1
MCCC2
MGARP
KIT
XBP1
ITLN2
FOS
NME4
DECR2
SIK3
WBP1L
USHBP1
TMPPE
GLB1
BABAM1
CLCN4
KLHL5
JADE1
POU5F1
H2BC5
H1-4
PARD6B
TIPIN
SAA1
CXCL2
MAB21L4
CROCC2
PLAAT5
ZNF641
UTRN
ZNF367
LGR5
CHMP5
C6orf163
BAG1
ZNF398
GSTA4
TIAM1
APOL6
BRIP1
FEM1B
INSL4
ERP27
CALML5
SPOPL
HSPA2
SIX1
RBM15
SLC20A2
STARD8
SLC7A9
P2RX6
TET1
MARVELD3
FNBP1L
RGPD2
RGPD1
SETD4
DOCK5
DEFB130B
DEFB130A
CBR1
LHX8
HACD2
H3C3
H1-2
RALBP1
PCDH15
SNX31
FBL
CLDN10
KCTD7
ZNF22
PLAC8
DENND1C
CRB3
AFF4
MB21D2
LGALS4
FAM102B
ATP13A2
BCAR1
NDUFB5
MRPL47
PPFIBP2
EHD4
CCNL1
GPR78
CHN2
SLC4A11
NSD3
LETM2
KRAS
GABRR3
TULP1
NOB1
SAMD7
DNAJC21
VIT
RGL1
CORO1C
ARPC5
ADGRF4
RBFOX2
PFDN4
SLC22A5
ARHGEF10L
C6orf132
TRAM2
ROPN1L
BMP10
GIPC1
PIK3C2A
AZIN1
ODAM
ADGRF5
BAZ1B
UBL3
BCAS1
MESP1
PHTF2
MED15
IL1F10
RHOH
POLG2
DDX5
CENPS-CORT
CENPS
IQGAP2
UCMA
DGKD
ASB2
CMTR2
IBTK
SHISAL2B
MRTFB
GREB1
BIN1
LIFR
STS
SLC6A9
SLC6A2
CLIC4
ZNF106
TSHB
TMPRSS2
SNAP23
APBB1IP
NPAS4
PHF6
CFAP92
ASB15
TEX46
CITED4
ACOT6
NBEA
HPDL
TTLL7
SYNPO
RIPOR1
MIGA1
BMP7
ASPSCR1
ACOT2
RASL11B
SENP5
TRA2B
SLC7A8
SLC12A3
PRPS1L1
LCMT1
C1GALT1
TCN1
BCAS3
AFF1
TRPM1
RTN4
BZW2
RRS1
POLR2J3
ADHFE1
IFFO2
EVPLL
LTA4H
LSMEM1
GNGT1
GNG11
TRIM17
ITGB6
H3-4
CST4
TFE3
PALLD
ITM2C
GPR173
CNOT11
NPEPPS
CCDC153
CBL
RASSF2
CPNE8
TOMM40
C1orf159
ATXN7
CDS1
TRIM33
OSBPL2
KIFAP3
FREM2
ACER2
SULT1A4
SULT1A3
SPOUT1
RHOQ
RAB44
KYAT1
ATP6V1E2
TUFT1
SNX27
RGS22
CYLC1
TACC2
ATG9B
ABCB8
MYCN
ANKUB1
SEH1L
PTPN6
C12orf57
EGLN3
ART4
CMTM3
CTNNAL1
RNF114
SLC38A9
B4GALT1
SRI
LOC389199
FGF1
AFAP1
ZNF853
SPIDR
MYO6
MED16
H4C9
KDM5C
CRISP3
SLC1A5
KPNA3
CLEC12A
VOPP1
SLC28A3
CD46
OSBPL8
TNFAIP8
TMEM82
SLC25A34
PIP4P2
NBR1
LASP1
TSTD1
RPS14
SVOPL
MPP4
SPTLC2
DUSP21
SLC22A6
FYB2
UIMC1
ST8SIA6
FUT3
GLYAT
CTNND1
HAPLN1
FOXN4
CMC2
PTPRF
CCIN
BANK1
GAPDH
CSRNP2
CLYBL
DEPP1
SLC23A2
PTCD1
HOATZ
CPSF4
BTG4
PLD5
MTUS1
LHX4
SUPT7L
SNX29
SLC4A1AP
SLC17A5
KEL
GJA10
ELF3
RAD23B
FHDC1
BIK
ASPRV1
AKNAD1
RBM47
PELO
ITGA1
ZNF366
SETD1A
ORAI3
BNC1
SLC25A13
FAP
ANXA3
SPINK4
PLPP3
NANOGNB
LRRC45
IFNL3
ST6GALNAC1
PEF1
KRT7
TXK
TMEM254
SCNN1A
LTBR
KCNJ1
CBLC
VSTM5
OR5H14
ELMO3
ZG16
TUBG2
TRIM37
RIN2
HSD17B1
ANKRD10
SMARCA2
RFLNA
HSPB8
RAPGEF1
ATE1
IER3
FLOT1
MSX2
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
ZNF358
MCOLN1
PHF20
FAM111A
DLC1
SPAM1
NAA30
WWC3
PSMD6
PRPS1
COASY
USO1
TRABD2A
TOR2A
PRSS16
IGFL4
TBC1D12
DCAF8L1
TAP1
PSMB9
ABCG1
SCRIB
POLR2J2
CLPB
BRD4
SPTAN1
APPBP2
MYBL2
CSGALNACT1
ULK2
NHSL1
GAS2L3
THOC7
IL22RA2
GGCT
DAW1
RNASE7
RNASE13
PAK6
OSBPL9
YPEL3
TET3
RHPN2
NPL
GDPD3
SELENOI
RHOV
MREG
HOGA1
H2BC4
H2AC6
FGFRL1
ANKRD2
ADGRF3
CDCA4
GOLGA5
GDF3
DPPA3
PLEC
HES1
ZMYND8
KANK1
HSPB3
WDR53
TOMM34
FBXO45
TTR
KCNJ15
CLPSL1
CELSR2
KIFC3
SLC25A26
PMEL
CREB1
TENM3
PRSS8
CHRNA10
TSPAN9
DGKZ
MAVS
KIF22
CLUL1
CETN1
AP2S1
CYRIB
TPST2
WNT6
TMCC3
SLC49A4
HSPBAP1
GRHL3
BCAR3
PTPRE
ARHGAP35
TTC8
ARID5B
SERPINE1
LARGE2
FAM53B
SH3GL3
SH2D1B
SELENOH
DEK
SASH1
DHX40
CALD1
TAF1C
PHOSPHO1
KRT18
FBRSL1
CLIP4
CDH18
S100A9
GM2A
TMPRSS11F
SH2D7
RNGTT
NRAS
TBL1X
IDS
PDGFRL
CAMK2G
ANKRD31
RIPOR2
NKIRAS1
CORO2A
AIG1
STX16
LRCH1
H2BC11
H2AC11
SALL4
REEP3
JMJD1C
EPHB2
AEBP2
TRIM5
TRIM22
TPK1
HCAR1
CXXC5
CDC14B
KALRN
H2BC21
H2AC21
H2AC20
RABGAP1L
GHR
EHHADH
CAP2
SCIN
OVOL2
FRYL
C12orf66
NEK6
MRPL38
TTC39C
SLC43A2
CACNA2D3
TRIML1
SEPTIN3
CLDN6
CCDC68
TMPRSS13
SLC39A14
SLC25A17
BASP1
H4C8
ATMIN
ACOXL
TTLL4
MAGI1
PIK3C2B
FOLR3
ANOS1
PTPN3
NR2C1
STON1-GTF2A1L
WIPI1
SIGLEC10
TPCN1
FERMT1
THNSL1
PDE4DIP
MRPL58
SORT1
NRBP1
MBOAT2
DOCK9
DDX43
MAPK6
CALHM4
LMOD2
TEX14
RAD51C
RHEX
TRMT12
MFSD4A
AMOTL2
SULF2
NIT2
EXPH5
CCDC200
SLC52A3
HAVCR2
CD164
TNIP3
LRRC14B
PFKP
LPCAT1
EPS8
MYBBP1A
LCTL
GGT6
ZNRF3
EGFR
WWOX
TP73
NODAL
FMN1
PRRT1
PPT2
CARD17
TGFB3
PPP1R15B
IFT43
ERRFI1
TSPAN15
CNNM3
NAGK
EXO1
UBE2H
TMC1
ZFPM1
CREM
IGSF5
DNMT3A
ANP32C
ARL6IP5
USP39
TMEM150A
RNF181
MSI2
LDLRAD2
C2orf68
PPARG
TIAM2
MS4A7
EPB41L1
TMEM94
SERP2
TMEM131L
TFPI
SLC4A8
RMND5B
PLEKHM2
GALNT6
SMPDL3B
MEF2A
CYP27C1
BCAT2
PSTPIP2
FOXO6
CD36
RHNO1
FOXM1
CYB5A
CLDN4
SYCE2
EPB41L3
RDX
CCKBR
APOBEC3B
KLF6
FHL2
DTNB
STK3
PRLH
SMARCD2
MAMDC2
FURIN
APP
SEZ6
RPL15
OR5B3
EDARADD
DNAJB2
CARS1
OTUD7B
CD2AP
ZNF697
SARM1
RTKN
RHBDD1
IRS1
INTS2
BIN2
TPGS1
PCCB
MYO1B
CNDP1
TNF
SCARA3
PADI2