ChIP-Atlas: Target genes

Potential target genes for MSX2

Query protein: MSX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10003072 | Trophoblast stem cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
MSX2's Target genes

◢ MSX2: Average

◢ SRX10478468: MCF-7

◢ SRX10478469: MCF-7

◢ SRX10003070: Trophoblast stem cells

◢ SRX10003071: Trophoblast stem cells

◣ SRX10003072: Trophoblast stem cells

◢ MSX2: STRING

PALM2AKAP2
MTRNR2L8
PSG5
STK32C
LRRC27
MTRNR2L2
MSH3
DHFR
ARHGAP5
RBL2
PSG9
MKLN1
SMARCC2
KIF5C
PSG11
PSG1
DUX4
PLA2G4D
HSD17B4
ADAM17
BACH2
PSG3
CDADC1
PSG7
RNF43
EXOSC2
NDST1
PPP1R2
ALOX5AP
COL23A1
NIPSNAP1
SLC6A4
RGPD2
RGPD1
PSG8
SLC5A10
CENPX
C9
SNX32
NEDD9
TMEM52B
OLR1
PSG4
MIS12
DERL2
CCDC141
PKIB
BCL2L13
ATP6V1E1
NR4A1
MTRNR2L1
SH3BP4
FABP7
KRTAP3-2
KRTAP3-1
YTHDF1
LRP2
PPP1R14D
DNMT1
HEG1
CDH1
HCAR3
HCAR2
ANKRD23
RABGGTB
GLG1
DOT1L
AP3D1
PTBP3
SERBP1
ZNF503
MYOCD
TNFRSF19
WWP1
KRTAP2-2
KRTAP2-1
KRTAP1-1
MYEOV
GTF2A2
UPK1A
CRPPA
CCDC81
HROB
HDAC5
TCF15
KIFAP3
PACSIN2
SPNS2
RAB17
CLCN4
PSPN
ALKBH7
ETV3
WBP1L
SNRPE
SLC7A7
MRPL52
ASAH1
COLEC12
NAGLU
ITGAM
GSTO1
TMEM141
SDC1
SEC23A
GEMIN2
SIX2
TAGLN2
IRAG1
COMMD8
SLC10A6
PHLDB2
ACSS1
PISD
ZDHHC1
TPD52
HECTD1
UBXN11
WDR93
PEX11A
ENPEP
IRF8
ADGRG3
OR10V1
DNAJC15
C18orf21
GTPBP4
ADH4
SLCO2A1
FRG2
ADAM10
CHI3L2
TAS2R41
USHBP1
BABAM1
SLBP
ANKRD40CL
TMCC1
AMOTL1
DPEP2
KRT1
ZNF740
CSAD
FAM110A
BAMBI
FDFT1
LDLR
TGFBR1
GTPBP6
PARP16
ART1
IFNAR1
ENTPD1
CCNL1
SLC25A44
BACE1
GCM1
GALNT11
CLPSL1
KRAS
SFXN5
TLK1
IL10RB
PATJ
UBE2J1
EPS15L1
ANKRD1
CFAP45
PRR5
TMED10
METTL21A
PTK2B
MTDH
CXADR
FAM151B
P2RX6
BCAR1
NAA30
PLAAT5
DNAJB2
PIK3C2A
ZNF444
SPOPL
PKP2
FAM89A
FGD3
GRHL3
SLC18A1
BIK
MEST
ID1
SLC7A4
SOX9
RASA2
SH3YL1
ACP1
TXNDC2
RNF126
FSTL3
KIAA1191
EBAG9
ALPP
GLIS3
C1QTNF6
MAPK10
EFNA1
TMEM245
TTC23L
ARHGEF18
FNBP1L
TRUB1
CHST6
LATS2
FOCAD
LGR5
HAPLN1
SLC2A8
LHX8
SLC6A9
EVPLL
OR5B3
LYRM1
DCUN1D3
ZNF362
EGLN3
SLC25A17
ATP2B1
TMTC2
RSAD2
SLC15A2
ACOT2
BANK1
ACOXL
NOB1
SLC22A6
MTRNR2L9
IFNL4
IFNL2
DPRX
MESP2
IGSF22
NSD3
LETM2
RIPOR1
CCR5
B4GALT1
ZNF22
TTLL7
SLC12A3
STARD8
RYK
SLN
ZNF474
RHOQ
ATP6V1E2
SLC19A3
LIMS4
LIMS3
SYNPO
CAMSAP3
TRPM6
SEMA6A
FBL
ITLN2
CORO1C
LYN
KRT19
EYA3
DEPP1
TMPPE
GLB1
CLYBL
USP6NL
PRKCZ
LSM14A
TRPM1
AEBP2
CLIC4
KCTD7
IKZF3
PTTG1IP
EPB41L3
MAMDC2
NME4
DECR2
SYBU
VSTM5
TMC1
FOXN3
TXNRD1
SLC7A6
IL1R1
CTPS1
ERP27
TRAM2
SLC25A13
NR4A3
ASB15
GJA10
RXRA
CCSAP
ZNF592
SIK3
SMARCA2
KLF6
KDM5C
LTBP2
FGFRL1
NIBAN2
HSD17B1
COASY
LIMS1
DCAF8L1
PIWIL3
MS4A2
TMEM88B
ANKRD65
BMP10
CPNE8
SAA1
PLAC8
GATA2
TAF6
CNPY4
CHN2
PHTF2
IQGAP2
SVOPL
ZNF320
RARS1
PRKRIP1
TULP1
FOLR3
ZBED1
DHRSX
PCOLCE2
MSI2
INSL4
GIPC1
SPIDR
KCNJ1
ALS2
LGALS4
SLC4A11
FKBP1A
ABLIM1
CDC42SE2
LOC105378979
EHF
CENPS-CORT
CENPS
PLEC
CD164
SHPK
CTNS
SLC30A1
PCNA
CDS2
KRT8
FBXW8
SLC20A2
IFNL3
TSPAN10
NPLOC4
CLDN10
GAS2L3
ZNF343
TIAM1
SNX31
RBFOX2
CD46
PTCD1
CPSF4
WIPI1
PWWP2B
ATG9B
ABCB8
DHCR24
ST8SIA6
ASPRV1
DLC1
PET117
KAT14
DENND1C
CRB3
SAMD7
KALRN
ZNF106
SNAP23
AFF1
CDS1
SNX27
ANP32C
CDC14B
TMEM107
AMN1
UBE4B
PHRF1
DNAJC21
GPRC5A
ANO6
ACVR1
ITGB6
CTNNAL1
ZG16
PRPS1
TRIM5
TRIM22
G3BP2
EID2B
EID2
CST4
SNX29
KRT7
TMEM254
TAF1C
ELF5
PSG2
TMEM212
UBL3
GNGT1
GNG11
TMPRSS11F
NODAL
ALG10B
FUT3
CCIN
YWHAE
HEXB
ZNF341
PXMP4
OLFML1
VIT
FHDC1
ZNF366
MRPL58
MUC3A
SLC44A1
C6orf132
CITED4
AKNAD1
NTAN1
TNS3
MAB21L4
CROCC2
SETD4
CBR1
LIFR
CYLC1
GABARAPL1
SLC7A11
SEC22B
TIPIN
GABRR3
PLPP3
UBE2H
ZNF674
CD55
KLHL5
RHOH
TCN1
MTUS1
CCDC68
AMOTL2
SH2D4A
MRPS23
TBX2
PTPRF
POLD4
LNX1
HMOX1
C1GALT1
TACC2
ILF3
BAHCC1
KRT18
ZNRF3
TACC1
TSTD1
TRABD2A
KRT71
ZNF641
ASPSCR1
SLC7A8
OSBPL8
CMC2
AP2S1
TMCC3
ARHGAP35
KEL
SCNN1A
LTBR
TNIP3
CARD17
ADGRF5
TP73
CCDC88C
SETD1A
ORAI3
RFLNA
RNASE7
RNASE13
TTLL4
LDLRAD2
PGS1
SEC11A
BAZ1B
ACER2
CREB1
KIF22
ANOS1
DUS2
DDX28
KLF7
TM4SF18
SPG7
DGKD
RTN4
SLC23A2
SALL4
EHD4
ARHGEF10L
CMTM3
PTPN3
AP5B1
SCAMP4
ADAT3
MITF
OVOL1
SEH1L
SUPT7L
SLC4A1AP
MAVS
CLCN5
CD2AP
FAH
VWA3B
CORO2A
BAX
KIT
TUBG2
EHHADH
CALHM4
ZFPM1
MRPL17
ZNF749
FGD4
RPS14
BNC1
GGCT
LMOD2
ERRFI1
SOWAHC
SEPTIN10
CNNM3
DLG2
SLC45A4
TRMT9B
RALBP1
CCDC153
CBL
SPTAN1
HOGA1
ANKRD2
GM2A
TNFAIP1
IFT20
CHMP5
BAG1
HACD2
MED15
IBTK
PHF6
MIGA1
LTA4H
DUSP21
KIFC3
DGKZ
C12orf66
CD177
LOC388282
ACOT1
PPFIBP2
RGL1
ARPC5
UCMA
PRPS1L1
TXK
C9orf40
BUB1B
ING2
FRG2C
FRY
C6orf163
SIX1
TRIM17
H3-4
QPCT
ARHGAP45
KRTAP9-1
KRTAP4-2
KRTAP4-1
GPR78
WNT6
DEK
CXXC5
NKX2-3
OR5H14
RHEX
DNAJB13
CDK3
CTR9
TBC1D14
ANKUB1
SH2D1B
SLC39A14
TNF
LTB
LTA
LST1
KLHL11
CARHSP1
PDSS2
AFF4
SLC6A2
MYCN
NHSL1
GOLGA5
IDNK
AXL
LSMEM1
LOC389199
AFAP1
PEF1
PMEL
CLUL1
CETN1
PLEKHM2
TNRC18
PRDX3
ZNF398
BIN1
SPTLC2
FAM83A
RTN2
PPM1N
CDK19
AMD1
OSBP
KMT2E
MIDEAS
LOC102724770
DGCR6
RAB44
CRISP3
GAPDH
MSX2
TTR
REEP3
JMJD1C
SEZ6
TPGS1
ITIH5
TIMELESS
SGK3
CXCL2
RBM15
NDUFB5
MRPL47
CSRNP2
EPB41L1
GRAMD1B
SYT12
MORC4
SPHK1
ATP6AP2
IFFO2
GLYAT
TENM3
ID3
POU5F1
LHX4
HSPB3
TSPAN9
CNDP1
ADGRG1
NEBL
UBALD2
PKD1L2
UTRN
CMTR2
TFE3
RBM47
IGFL4
CS
ZBTB12
EHMT2
C2
FAM107B
RLBP1
MCCC2
DEFB130B
DEFB130A
TRIM33
UIMC1
SLC25A26
EGFR
RTL8C
RTL8B
ZNF280D
TH
AZIN1
FAM111A
CLPB
BCAR3
CAMK2G
SEPTIN3
MAGI1
APP
GMFB
PTCRA
CNPY3
XAGE3
RAB5A
EFHB
TAS2R14
NCBP3
TSHB
APBB1IP
KPNA3
ST6GALNAC1
PAK6
SLC4A8
GALNT6
C20orf203
ZBTB2
APOL6
STS
HOATZ
BTG4
NEK6
BCAT2
PICALM
CABIN1
UHRF1BP1L
FYB2
RABGAP1L
ERAP1
WDR91
TMCO6
NDUFA2
IK
CD14
TSKS
AP2A1
AMZ1
TEX46
ABCG1
DAW1
PHOSPHO1
HAVCR2
MYBBP1A
GGT6
CARS1
CYP3A7-CYP3A51P
CYP3A7
ANXA4
AAK1
RHOB
MTR
TBL1X
TMEM131L
CSF2RA
IGFL2
LGR6
ZNF319
USB1
TMEM259
CNN2
WASHC3
EAPP
PCDH15
GDF3
DPPA3
TRIML1
APOBEC3B
JUN
KISS1
RASSF2
TMEM82
SLC25A34
TAP1
PSMB9
CSGALNACT1
SLC29A1
MYMX
PLEKHG4B
ST3GAL6
TRNP1
TRPV2
SPOUT1
KYAT1
SELENOH
SLC52A3
ZNF697
KTN1
TTLL1
SELENOT
AGAP3
GAST
BRD4
TTC8
ANKRD31
HCAR1
FHL2
TGFBR3
CRISP1
CTNND1
SORT1
PFKP
NFIL3
THAP3
PHF13
MRAS
SHISAL2B
CDCA4
DOCK9
OTUD7B
INTS2
PRSS22
PDS5A
KDM2B
EIF2AK4
XBP1
DOCK5
RAPGEF1
STON1-GTF2A1L
LIPC
RNF19A
ZBTB4
SLC35G6
POLR2A
ANGPT4
CCDC183
IL34
PTPN1
MGARP
ART4
MED16
MPP4
NUP50
KMT5C
ZNF143
LPCAT4
HSPB7
CLCNKA
IL23R
PRSS8
EHBP1
ASB4
GPR82
CGN
SMIM15
C1orf159
ANXA3
HSPB8
KCNJ15
CALD1
TMPRSS13
SERP2
SNX6
XCR1
SPRED2
MYO10
PXMP2
POLE
CFAP92
TOMM40
NKX6-3
ANK1
TMEM270
SENP5
ATE1
AIG1
WWOX
TYW3
CRYZ
CXCR6
SH2D5
MICAL3
CALML5
ATP13A2
ZNF853
ELF3
NAGK
TBC1D1
TYRO3
KIF3C
NFX1
C11orf16
ASCL3
FERMT1
FMN1
ACTN4
TNIP1
POLB
BCAP29
TOMM34
SASH1
SPNS3
LOC105370980
A4GALT
CCAR2
C8orf58
HPDL
RAD23B
ARID5B
SH3GL3
ANKRD13C
PTPRD
PHLDB3
ITPK1
ZNF83
RPF1
MEF2D
IDS
TIAM2
MFSD2B
C9orf131
SHMT1
UBE2D3
TIGD5
EEF1D
SLC49A4
HSPBAP1
MEF2A
KIF25
NCOA1
MRS2
FOXE3
KIF3B
AHCYL1
ROPN1L
MYO18A
UROC1
CHST13
NAV2
ELMO3
RIPOR2
SULT2B1
LAMB2
SNAI1
ACOT6
MREG
SH2D7
LRCH1
ATMIN
ZNF624
FZD6
ACER3
PALLD
ULK2
DDX60L
MIA2
SYNE3
GLRX5
PIAS4
PPP1R15B
ARRB1
AMHR2
AKAP13
KLF2
SLC43A2
SMPDL3B
CERS4
PNKD
MTMR11
ATP7B
ALG11
MYO1B
LPP
MB21D2
NRK
DCANP1
PRDM2
IL1F10
NANOGNB
PHF20
FAR2
COL7A1
DIP2C
BRD3
RASL11B
YPEL3
GDPD3
MGAT4A
ZNF367
NEURL3
ARHGAP17
SLC7A9