ChIP-Atlas: Target genes

Potential target genes for MSX2

Query protein: MSX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10003071 | Trophoblast stem cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
MSX2's Target genes

◢ MSX2: Average

◢ SRX10478468: MCF-7

◢ SRX10478469: MCF-7

◢ SRX10003070: Trophoblast stem cells

◣ SRX10003071: Trophoblast stem cells

◢ SRX10003072: Trophoblast stem cells

◢ MSX2: STRING

PALM2AKAP2
STK32C
LRRC27
PSG5
RBL2
PLA2G4D
ARHGAP5
PSG9
PSG1
PSG11
NDST1
SNX32
MTRNR2L8
MKLN1
SMARCC2
CDADC1
SLC5A10
BACH2
GTF2A2
FRY
PSG7
SLC6A4
CRPPA
DOT1L
AP3D1
RAB17
ITGAM
SERBP1
HSD17B4
PIWIL3
TNFRSF19
PSG8
MTRNR2L2
MSH3
DHFR
CCDC141
MTDH
NIPSNAP1
YWHAE
DUX4
GLG1
PSG3
PPP1R14D
ADAM17
WWP1
ENTPD1
MS4A2
ZDHHC1
LTBP2
ANKRD23
SPNS2
C18orf21
RNF43
SLC25A44
PSG4
IFNAR1
TMTC2
ADAM10
ALOX5AP
HCAR3
HCAR2
MYOCD
LRP2
CAMSAP3
NEDD9
TMCC1
FAM110A
PATJ
EXOSC2
ADGRG3
TMEM52B
OLR1
HEG1
EHF
QPCT
TMEM270
METTL27
YTHDF1
FABP7
HROB
HDAC5
GSTO1
DPEP2
LNX1
BCL2L13
ATP6V1E1
CDH1
KIAA1191
ASB2
AMN1
PSPN
ALKBH7
COLEC12
ATP2B1
TAGLN2
KRTAP2-2
KRTAP2-1
KRTAP1-1
PTK2B
SLC10A6
TMED10
ZNF341
PXMP4
PCOLCE2
ALG10B
SOX9
CENPX
LRRC45
ENPEP
MYEOV
RLBP1
SLN
ANKRD40CL
UBE4B
SLC7A4
GTPBP4
SNRPE
PHLDB2
RSAD2
OR10V1
MIS12
DERL2
TRUB1
KRT1
LYN
NAGLU
JADE1
RABGGTB
RYK
SEC23A
GEMIN2
WDR93
PEX11A
EID2B
EID2
TET1
C9
TAS2R41
EPS15L1
SPG7
RASA2
FOCAD
NCBP3
ETV3
ZBED1
DHRSX
SLC7A6
LOC105378979
ABLIM1
SLC7A9
SEMA6A
CCDC81
IL34
ID1
NTAN1
CDK19
AMD1
SH3BP4
ZNF474
ZNF331
ANKRD1
ZNF740
CSAD
ACER3
UHRF1BP1L
MAPK10
LIMS4
LIMS3
GALNT11
DNAJC15
COMMD8
LIMS1
KIF5C
UPK1A
SH3YL1
ACP1
SLCO2A1
UBE2J1
ACSS1
SH2D4A
ZNF749
SFXN5
KIT
NR2C1
COL23A1
SHISAL2B
BACE1
KRTAP3-2
KRTAP3-1
PKIB
OLFML1
PRR5
PET117
KAT14
POU5F1
MARVELD3
NKX2-3
MEST
RARS1
ELF5
HECTD1
IL10RB
PISD
ASAH1
DOCK5
ID3
PRKCZ
TPD52
ALPP
PSG2
DNAJC21
IFFO2
EBAG9
ZNF407
TSPAN10
NPLOC4
SLBP
CDC42SE2
NME4
DECR2
FGD3
TGFBR1
UBXN11
EFNA1
SLC19A3
RGL1
ARPC5
ITLN2
SLC18A1
CHI3L2
IRAG1
PTPN1
CCSAP
ROPN1L
TTC23L
LASP1
FDFT1
MGARP
GABRR3
ADH4
SYBU
EIF2AK4
FGD4
MED16
FEM1B
PRKRIP1
GPR173
HSPA2
CHRNA10
SLC15A2
GCM1
ZNF641
NSD3
LETM2
WDR53
FBXO45
HEXB
NIBAN2
LMO4
OSBP
SLC7A7
MRPL52
GSTA4
CXADR
CTPS1
PLAC8
TMPRSS2
CITED4
DEFB130B
DEFB130A
ATP13A2
AFF4
UTRN
ZNF444
GPR78
DNMT1
FBXW8
APOL6
C6orf163
TCN1
RNF126
FSTL3
TIPIN
MED15
CCR5
TIAM1
ARHGEF10L
IGSF22
GLIS3
ARHGEF18
LGALS4
RALBP1
C1QTNF6
EYA3
PCDH15
DUSP21
INSL4
FAP
SLC20A2
STARD8
HACD2
TMEM141
SLC30A1
LDLR
IKZF3
PPFIBP2
SDC1
ZNF343
EPHB2
FKBP1A
USP6NL
TAF6
CNPY4
FZD6
CYLC1
ZNF22
DLG2
ITM2C
MRPL38
LYRM1
DCUN1D3
SMIM15
ODAM
METTL21A
CBLC
BAMBI
TMEM245
P2RX6
AMOTL1
DHCR24
ZNF398
C6orf132
RGPD2
RGPD1
CORO1C
IBTK
PELO
ITGA1
CFAP45
CLEC12A
HMOX1
SEC11A
ANO6
RRS1
ADHFE1
PTTG1IP
SLC6A2
TMEM88B
ANKRD65
AZIN1
HERC4
HPDL
PTBP3
ZNF592
ACOT6
FBL
PHTF2
SPAM1
PPP1R2
FAM89A
ULK2
ADGRF5
STS
KLHL5
PKP2
TEX46
THNSL1
SLMAP
CHMP5
BAG1
MCCC2
SETD4
CBR1
ALS2
RBM15
SLC2A8
UBL3
TPST2
CENPS-CORT
CENPS
TSHB
TXNDC2
ACVR1
SENP5
SEH1L
ZNF367
KANK1
TRMT9B
CXCL2
PPY
DENND1C
CRB3
BMP10
BIN1
ZNF362
LRRC14B
ART1
SLC38A9
LATS2
TCF15
SIK3
EHD4
KEL
PSTPIP2
CLIC4
SIX1
ZNF106
SNAP23
CTNND1
MIDEAS
KRT71
FNBP1L
UIMC1
OVOL2
PGS1
GIPC1
LOC389199
AFAP1
VPS37C
USP39
TMEM150A
RNF181
C2orf68
CYB5A
PLD5
LHX4
CDCA4
IL1R1
LSM14A
DGKD
NDUFB5
MRPL47
MESP2
FBRSL1
ANP32C
NAV2
KCTD7
ANXA3
TTC39C
CRK
TNS3
CMTR2
RNASE7
RNASE13
SLC28A3
SLC17A5
CST4
RBFOX2
TRAM2
APBB1IP
SGK3
POLD4
CFAP92
SLC7A8
TMPPE
GLB1
NCOA3
NUP153
SNX31
CHST6
CALML5
PIP4P2
SASH1
GHR
SEC22B
TLK1
SLC1A5
CD46
HOGA1
ANKRD2
IQGAP2
DDX43
IRF8
CHN2
CHAT
SLC44A1
SAA1
KDM5C
TULP1
SPOUT1
KYAT1
BNC1
MAB21L4
CROCC2
SNX27
ST8SIA6
HOATZ
BTG4
MB21D2
LIFR
CPNE8
PLAAT5
RASL11B
TET3
NKIRAS1
RPL15
GOLGA5
PRPS1L1
TMEM82
SLC25A34
ST6GALNAC1
VIT
SLC39A14
PARP16
ZNF853
PSG6
TXNRD1
GLYAT
ADAP1
SERPINE1
SLC25A13
AIF1L
RTN4
LSMEM1
SYNPO
OSBPL9
PADI2
MTF1
NDUFA12
CTNNAL1
RHPN2
PRSS8
KRAS
RNGTT
NR1D2
HIVEP2
PIK3C2A
ACER2
LARGE2
MAMDC2
TBX2
NBR1
SLC49A4
HSPBAP1
SAMD7
C1QBP
WIPF1
SIX2
CD55
SUPT7L
SLC4A1AP
RBM47
DNASE1
NANOGNB
ASPSCR1
LCMT1
ANKUB1
GAPDH
CYRIB
LCTL
KLRC3
RAPGEF1
CLMP
SH2D7
RIPOR2
CCKBR
OTUD7B
MYO6
BRD4
BASP1
IFNL4
IFNL2
TOMM40
MYCN
ST7
ERP27
MYBL2
PLEKHM3
ASB15
TUBG2
MED12L
RFLNA
ARID5B
CAMK2G
SCIN
SARM1
MARCHF7
VPS29
RAD9B
VTN
DAW1
TACC2
PTPRF
YPEL3
GDPD3
SH3GL3
FRYL
LACTBL1
FREM2
AP2S1
ARHGAP35
TPCN1
IQCD
DCTD
RASSF2
GTPBP6
FUT3
PHF20
GDF3
DPPA3
FMN1
SIRPA
BAIAP2L1
SPOPL
AKNAD1
FAM53B
SEPTIN3
ACE2
VWA3B
SLC22A6
FYB2
YY1
TRPM6
GNGT1
GNG11
ART4
CMTM3
USO1
PAK6
TSTD1
OR5H14
PLCL2
DEPP1
IL22RA2
MRAP2
NCOA1
TSPAN15
TACR2
PEF1
ZNF358
MCOLN1
DNM1L
MIGA1
KPNA3
VOPP1
SVOPL
NEDD4L
ACOT2
ARHGAP40
HEATR4
DPRX
SLC12A3
C1orf159
ZG16
ANKRD10
KIF22
DNMT3A
ASAP1
NIT2
BANF2
IBSP
RXRA
AFF1
GMFB
SLC4A11
TRIM17
H3-4
PRPS1
TMCC3
SPR
KRT19
LTA4H
ASPRV1
GGCT
ATXN1L
OR2B11
CSF1R
BAZ1B
KIFAP3
KIFC3
AIG1
FBLN2
USHBP1
BABAM1
ATR
CCDC153
CBL
EGLN3
RBBP7
OR13D1
CMC2
TRIML1
CXCR6
USP7
RPL17-C18orf32
RPL17
EPOP
SPTLC2
SRSF4
FRG2
C1GALT1
SPTAN1
TTC8
JAM3
SRI
ABLIM3
HNRNPF
TAP1
PSMB9
NAGK
SNX29
CLUL1
CETN1
SLAMF1
TNFAIP3
FAM111A
TP73
PLEKHM2
GRM4
RPL26L1
PLXNB2
LGR5
B4GALT1
TOMM34
PDGFRL
SLC43A2
PORCN
EVPLL
TNFAIP8
MGAT4A
MFN2
HMGCS1
CLTC
PARD6B
TSPAN9
TTYH3
WWP2
PARP8
EMC2
LDLRAD2
SPNS3
ZNF552
CAPN5
ZFPM1
DTNB
TAAR1
SPG11
PATL2
TACC1
CLCN4
FGF1
PLEKHA8
CNOT11
MAVS
PAPPA
STXBP6
PMEL
SLC4A2
EML5
KRT8
RHOQ
RAB44
ATP6V1E2
NRBP1
RAB10
PHF6
RAD23B
NPL
TENM3
AEBP2
USP11
CUL2
CDK16
TRABD2A
TTR
FBXO42
ITGB6
CORO2A
NEK6
ATXN7L1
USP44
SLC35A2
PIM2
SESTD1
ELMO3
TRIM5
TRIM22
FAR2
KAT2B
SMIM30
NR4A1
SEPTIN9
SEC63
CRISP3
PIK3C2B
AGFG1
PEX3
ADAT2
SGK2
MSX2
CDC14B
CACNA2D3
SELENOH
CARS1
BRD1
GINS1
ABHD12
NOB1
CDR2L
CCIN
SETD1A
ORAI3
MRPS23
BANK1
ZNF366
RABGAP1L
BIN2
TRIM45
SLC18B1
FNIP2
MCAM
CSH2
SYDE2
FAM102B
RIPOR1
MRPL58
LMOD2
ARL6IP5
NANOS1
CXXC5
TMPRSS7
SLC6A9
TALDO1
SNRNP35
MYLK3
CLDN10
OSBPL8
ATE1
LCN2
EDNRB
SIGLEC6
G3BP2
INSR
ADGRF4
TXK
RHOV
PPARG
RTKN
CYP1B1
PRM1
TMEM212
HSD17B1
TPK1
SFXN1
BCR
SLC45A4
ZRANB1
SLC7A2
PACSIN2
MREG
GM2A
CNNM3
NFIL3
LDAH
ZNF503
TMEM254
PHLPP2
SPIDR
CALD1
EPS8
CD2AP
TFE3
SLC25A26
PRRT1
PPT2
CITED2
FHDC1
WWC3
HAPLN1
S100A9
LRCH1
MAGI1
MBOAT2
ERGIC1
TMEM107
GPRIN3
CCNL1
ELMOD2
NUBPL
EIF3D
TRPM1
ZNF76
HK1
KIAA1586
CNNM4
GPD1L
MCCC1
RGMA
CDK7
HSPB2
CRYAB
C11orf52
COASY
ACOXL
CNDP1
TIAM2
MRS2
CSRNP2
PCCB
SLC39A10
TMEM185B
EFCC1
OR8S1
BCAR3
LEPR
ANKRD33B
CLYBL
MYBBP1A
GGT6
LOC388282
KTN1
TNRC6A
MTUS1
ANXA6
LHX8
WNT6
DOCK9
PARP4
BAIAP2
BCOR
MYO18A
PTCD1
CPSF4
ABCG1
CREB1
BCAT2
PTGES
MICB
SLC2A3
MTRNR2L1
FOLR3
TFPI
ALOX5
ATP6AP2
PRORP
PPP2R3C
PDGFB
UCMA
C11orf94
USP43
FAM151B
ADGRG1
SPAG9
CEACAM19
MOG
UGCG
OGDH
SMARCA2
DEK
PTPN3
HPS5
GTF2H1
RCC1
INO80C
GNG10
IL1F10
TRIM33
EHHADH
LPIN1
MPP4
GRHL3
ATMIN
SCARA3
CSPP1
COPS5
PRPH2
SEPSECS
ITPRIP
COA7
HNRNPA0
SMPDL3B
DNAJB1
ADRB3
CELA1
CSGALNACT1
EXPH5
APOBEC3B
ZNF697
MTRNR2L9
MRTFB
ELMO2
VIRMA
IGF2BP3
NUDT13
DTWD2
IL1R2
RIN2
IGFL4
SLC52A3
EPB41L1
RDX
KMT5C
KCTD14
HSF5
DARS2
CENPL
DNASE1L3
CARD17
RCL1
NFYB