ChIP-Atlas: Target genes

Potential target genes for MSX2

Query protein: MSX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: MSX2 | Average
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
MSX2's Target genes

◣ MSX2: Average

◢ SRX10478468: MCF-7

◢ SRX10478469: MCF-7

◢ SRX10003070: Trophoblast stem cells

◢ SRX10003071: Trophoblast stem cells

◢ SRX10003072: Trophoblast stem cells

◢ MSX2: STRING

RBL2
PSG5
PSG9
ARHGAP5
PLA2G4D
PSG1
WDR74
PSG11
SLC5A10
MTRNR2L8
GLG1
DUX4
EXOSC2
RNF43
WWP1
NIPSNAP1
PSG7
AP3D1
WDR93
PEX11A
MTRNR2L1
HSD17B4
ADAM17
PSG3
PSG8
MTRNR2L2
MSH3
DHFR
FRG2C
SIRT4
CCDC141
YTHDF1
ZDHHC1
TMEM52B
RAB17
ITGAM
PPP1R14D
SIX2
ANKRD23
PSG4
LRP2
TXNRD1
COL23A1
BCL2L13
ATP6V1E1
SLBP
CRPPA
MTDH
IFNAR1
KRTAP2-1
GTPBP4
DPEP2
ATP2B1
FAM110A
PIWIL3
LYRM1
DCUN1D3
RABGGTB
TMTC2
C1QTNF6
KRTAP3-1
MIS12
DERL2
PATJ
CDH1
C18orf21
SLC10A6
NAGLU
GSTO1
ENTPD1
ANKRD40CL
SLCO2A1
PSPN
RYK
ENPEP
COLEC12
ADGRG3
FRY
FRG2
PKIB
TMEM107
BACE1
DNAJC15
GEMIN2
PHLDB2
RASA2
SEMA6A
ANKRD1
AMN1
ZBED1
DHRSX
CCDC81
COMMD8
HECTD1
SLC7A6
MEST
ABLIM1
CDK19
AMD1
SFXN5
RARS1
LNX1
ARHGEF18
PXMP4
SLC19A3
LIMS4
LIMS3
OSBP
EHF
FDFT1
LIMS1
UBE2J1
SH3BP4
GTPBP6
PRKRIP1
EFNA1
OR10V1
DLG2
IL1R1
FAM89A
OLFML1
PRKCZ
SYBU
SH3YL1
ACP1
SEC22B
TSPAN10
NPLOC4
SLC45A4
VPS37C
IGSF22
CD55
EID2
SLC7A7
TRMT9B
NTAN1
FGD3
ID3
SLC18A1
SH2D4A
BAHCC1
PGS1
ZNF474
TMEM88B
ANKRD65
TRPM6
KMT2E
PTTG1IP
MRPS23
ZNF749
TMEM245
PTPN1
TAF6
CNPY4
ATP6AP2
SLC15A2
CCR5
TTC23L
CTPS1
ZNF592
ZNF343
PSG2
TMEM212
CHST6
PKP2
ZNF407
LSM14A
BCAS4
CLTC
SLC44A1
PACSIN2
NIBAN2
LDLR
ZNF503
IKZF3
HMOX1
ACER3
ACVR1
NKX2-3
NR4A1
KRT71
TACC1
MGARP
KIT
FOS
DECR2
USP6NL
WBP1L
IL34
USHBP1
TMPPE
GLB1
BABAM1
CLCN4
KLHL5
POU5F1
H2BC5
H1-4
SAA1
CXCL2
CROCC2
PLAAT5
ZNF641
ZNF367
LGR5
C6orf163
ZNF398
GSTA4
BRIP1
INSL4
ERP27
OLR1
CALML5
SIX1
RBM15
SLC20A2
STARD8
SLC7A9
P2RX6
TET1
MARVELD3
RGPD2
RGPD1
SETD4
LHX8
HACD2
H1-2
RALBP1
FBL
PLAC8
ATP13A2
BCAR1
CCNL1
NSD3
KRAS
GABRR3
SAMD7
DNAJC21
VIT
RGL1
ARPC5
ADGRF4
RBFOX2
PFDN4
ARHGEF10L
C6orf132
PIK3C2A
BAZ1B
CXADR
BCAS1
MED15
RHOH
CLDN10
POLG2
IQGAP2
DGKD
CMTR2
IBTK
GREB1
BIN1
LIFR
STS
SLC6A9
TSHB
SNAP23
NPAS4
CITED4
HPDL
TTLL7
SYNPO
RIPOR1
MIGA1
ASPSCR1
TRA2B
SLC12A3
FEM1B
C1GALT1
TRPM1
RTN4
POLR2J3
ADHFE1
EVPLL
LTA4H
LSMEM1
KRT19
TRIM17
ITGB6
H3-4
SLC7A2
NPEPPS
CBL
RASSF2
FREM2
ACER2
SNX27
RGS22
TACC2
ATG9B
ABCB8
SEH1L
PTPN6
C12orf57
SGK3
CTNNAL1
SLC38A9
SRI
LOC389199
FGF1
AFAP1
ZNF853
MYO6
KDM5C
SLC1A5
POLD4
OSBPL8
SLC25A34
PIP4P2
NBR1
KRT8
TSTD1
RPS14
MPP4
SPTLC2
MIDEAS
DUSP21
BMP7
UIMC1
ST8SIA6
FUT3
CTNND1
FOXN4
CMC2
BANK1
CLYBL
DEPP1
HAPLN1
BCAS3
SLC23A2
HOATZ
BTG4
PLD5
MTUS1
LHX4
SUPT7L
SLC4A1AP
SLC17A5
KEL
GJA10
GALNT11
FHDC1
ASPRV1
PELO
ITGA1
ORAI3
BNC1
SVOPL
SLC25A13
ANXA3
NANOGNB
IFNL4
TMEM254
SCNN1A
LTBR
TRIM37
TLK1
ANKRD10
RFLNA
RAPGEF1
H3C15
H3C14
H2AC19
H2AC18
ZNF358
ZG16
SPAM1
PSMD6
NCOA3
HSD17B1
IGFL4
SCRIB
POLR2J2
CLPB
BRD4
APPBP2
CSGALNACT1
ULK2
GAS2L3
SIK3
IL22RA2
GGCT
DAW1
RNASE7
RHPN2
NPL
RHOV
MREG
H2BC4
H2AC6
FGFRL1
ANKRD2
CDCA4
ZMYND8
HSPB3
TTR
TFF1
KCNJ15
CLPSL1
KIFC3
SLC25A26
CREB1
TENM3
PRSS8
TPST2
TMCC3
GRHL3
PTPRE
TTC8
FAM53B
DEK
CALD1
FBRSL1
KRT18
GM2A
TMPRSS11F
NRAS
TNFAIP8
SMARCA2
CAMK2G
ANKRD31
RIPOR2
CORO2A
AIG1
STX16
H2BC11
H2AC11
SALL4
NEDD9
EPHB2
ACOT2
TRIM22
HCAR1
CXXC5
CDC14B
H2BC21
H2AC21
H2AC20
RABGAP1L
GHR
EHHADH
CAP2
OVOL2
FRYL
C12orf66
CSRNP2
MRPL38
TTC39C
FAP
H4C8
ATMIN
TTLL4
MAGI1
PTPN3
OR5H14
DLC1
STON1-GTF2A1L
ST6GALNAC1
WIPI1
FERMT1
NRBP1
MBOAT2
CALHM4
TEX14
RHEX
MFSD4A
AMOTL2
SULF2
NIT2
EXPH5
SLC52A3
HAVCR2
CD164
TNIP3
LRRC14B
EPS8
MYBBP1A
GGT6
EGFR
WWOX
FMN1
TGFB3
IFT43
CNNM3
NAGK
TMC1
ZFPM1
CREM
IGSF5
DNMT3A
TMEM150A
PPARG
ZNRF3
MS4A7
TMEM94
CLIC4
TFPI
SLC4A8
PLEKHM2
PAK6
GALNT6
MEF2A
CD36
RHNO1
FOXM1
CYB5A
SYCE2
EPB41L3
CCKBR
APOBEC3B
SMARCD2
EDARADD
DNAJB2
CD2AP
APBB1IP
ZNF697
PCCB
TNF
LTB
DNM1L
SPNS3
NAA60
NR1D2
NKIRAS1
RESF1
PLEC
MTF1
GPD1L
ADGRF3
GMFB
TNRC18
TSPAN3
HEXB
ARHGAP45
NR4A3
MRAP2
TPD52L1
ROPN1B
PLGRKT
CDK3
SLC29A1
NFIL3
CITED2
HEXIM1
PPY
CSPP1
ZNF552
SHROOM3
BANP
ALDH3B2
NCOA1
MARCHF7
ILF3
MRTFB
ADGRG1
CCDC59
TYW3
SPAG9
CRYZ
GCM1
PRPH2
MID1
CHD2
ATXN7L1
PTPRD
KLRC3
MRS2
ELF3
YY1
SLC39A10
ELMO2
DUSP14
USP44
CD177
TMC5
SMIM6
PIK3R3
DOT1L
KRTAP4-2
KRTAP4-1
KMT5C
WDR91
LOC388282
RBBP7
ERVW-1
SLC22A23
PICALM
KTN1
CXCR6
CCDC88C
DCTD
CS
CYP1B1
C1QBP
SULT1A4
SULT1A3
BOLA2
POLR1H
ARHGAP35
ZNF76
SPR
LACTBL1
EHBP1
TMEM185B
TPGS1
ARHGAP40
AIF1L
ACE2
WIPF1
PHLDB3
CAPN5
ID2
OR2B11
IGF2BP3
CSF2RA
SERPIND1
SCAMP4
KLF6
EPS15L1
ADAT3
TNFRSF12A
THOC6
SIRPA
HCFC1R1
DENND6A
NAALADL2
PLCXD3
SETD5
TTYH3
TCAF2
SELENOI
PORCN
FKBP4
JCAD
MTRNR2L9
SIGLEC6
SEPTIN9
PPM1D
PLS3
TUBD1
RPS6KB1
CHRNA10
ZNF444
TNFAIP3
SDC4
ALOX5
PPFIBP2
CYRIB
TRIM45
BTBD3
PTGES
LIMA1
SLC39A1
GSK3B
CREB3L4
TMEM130
HMGCS1
MICB
IL1F10
NBN
HNRNPF
FOXJ3
C9orf131
C11orf94
PARP4
HERC4
ERGIC1
TPM1
FAM151B
NRK
G3BP2
XCR1
INO80B
EGR1
SLC35A2
ID1
TLE3
LEPR
GGTLC3
FAR2
ZNF83
SH2D5
RNFT1
BAIAP2
ALDH4A1
SLC51A
HEATR6
PRPS1
ENSA
ANXA4
USP32
FBXL3
RDX
RB1
PTS
CABIN1
ARID5B
ZC3H10
RPL41
HES1
ARHGAP8
TREML1
ATR
HOXC12
HK1
CSF1R
RNF19A
PARP8
ZNF674
PAPPA
NEURL3
GEMIN6
MCAM
HDAC5
CSH2
VPS26C
KAT2B
YJU2
THAP3
MORC4
HSF5
H2AX
GRM4
USP3
MACC1
TMCO6
LPP
DIAPH3
CD14
ZBTB12
SVOP
EHMT2
C2
ANK3
EDNRB
PDCD1LG2
LOC102724265
BCR
ZMYND11
TOMM34
SOWAHC
SEPTIN10
HSPB7
CLCNKA
SELENOT
RHOBTB2
GMNN
SPAAR
PPP2R3A
KLRC2
H2BW1
AAK1
UBALD2
SPRED2
RIOX1
PEX3
OARD1
NFYA
C16orf46
ADAT2
TPD52L2
RAB31
PAPOLA
FBXO43
CDK7
APOL4
ABHD16B
KANK1
ARID4A
ANXA6
PLXND1
CDS1
H1-6
KIAA1586
GSTP1
FAM118A
TFDP2
TNRC6A
H1-3
RTN2
KL
MAP3K8
TMEM205
SULT2B1
RAB3D
OPRL1
LKAAEAR1
GOLGA8B
CCDC159
TRPV2
SLC2A3
IL36G
FAM107B
FBXO34
SLC12A6
S100A16
HID1
GPR82
TSKS
H2BC15
H2AC15
AP2A1
PTPN14
NFYB
CANT1
RHOBTB1
GNLY
ZNF280D
TRIM16L
TIAM2
PRAG1
PIK3C2G
NLRP7
IGFL2
AGAP3
ZBTB4
SLC35G6
POLR2A
NFX1
BATF
DGKZ
AP5B1
NUP153
METTL27
CFAP92
PDIK1L
NEBL
ATG14
SASH1
MAZ
HSPA4
TPRN
SOX7
SLC9A8
PGC
PRSS41
GNG10
RUVBL1
PLEKHG2
EIF2D
ABCA4
TBC1D12
GRAMD1B
C1orf74
AHCYL1
PGAP1
ZBTB7C
SYTL5
RGS8
DNASE1L3
HTR5A
H4C5
ANKRD33B
USP43
CYBRD1
PNKD
ING2
CRYAA2
CRYAA
OR8S1
LATS1
SCAMP2
ITGAL
SZT2
MED8
SEPSECS
LIMK2
KBTBD6
JADE1
HSPB2
F2RL1
CRYAB
BOLA2-SMG1P6
AKTIP
SPTSSA
NXNL2
DHX40
CYS1
ZNF331
SMYD3
COL7A1
CLDN4
TOP1MT
RNF111
PSG6
NAA38
EMC2
CYB5R1
BRI3
TUSC1
FURIN
SREK1
LGALS8
ADAP1
TRMT12
PRDX3
MPO
TMEM30A
RIMKLB
PPEF1
KLF7
KDM2B
IGFL1
GPR171
B4GALT1
USP36
PRKAG2
VNN2
SPAST
DCAF4
SPECC1L
SLC11A2
NAPEPLD
YPEL5
NSFL1C
ISM2
H2AC16
H1-5
EPO
DENR
ZNF335
LRPPRC
RARA
MYO18A
MAMDC2
DTWD2
H3C13
H2BC18
FBXW11
SPINK4
RPF1
LIMS2
IRAK2
DNASE1
CATSPERG
TOGARAM2
OSBPL9
IL23R
ENPP1
ARFGEF2
TNFSF8
SCRN2
RUBCNL
RABEP1
SIGLEC15
MYORG
MSANTD3-TMEFF1
AMHR2
UBXN2B
SETD3
SCARA3
OR52K1
CLMP
ARPIN-AP3S2
ARPIN
ADRB3
SLC6A4
LAPTM4B
ITGB3
SLC4A7
LZTS3
FZR1
ADIPOR1
ADAM22
RFWD3
PLAGL1
MKRN2OS
MAFG
TAS2R60
PLA2G2E
SPTSSB
WDR87
SIPA1L3
SLC25A24
PRUNE1
PNPLA8
PADI1
MINDY1
GNA12
SPATA9
RHOBTB3
MAN1A1
IER3
FLOT1
ARHGDIB
UTP18
MBTD1
ZBED9
MPZL1
TIGD2
SPOP
KCTD7