ChIP-Atlas: Target genes

Potential target genes for HDAC2

Query protein: HDAC2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX059711 | VCaP
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC2's Target genes

◢ HDAC2: Average

◢ SRX16386913: 293

◢ SRX3010110: A549

◢ SRX3010111: A549

◢ SRX24188777: BJ

◢ SRX24188786: BJ

◢ SRX20550182: BT67

◢ SRX20550183: BT67

◢ SRX20550184: BT67

◢ SRX20599715: Caco-2

◢ SRX20599717: Caco-2

◢ SRX017704: CD4+ T cells

◢ SRX687555: Erythroid progenitors

◢ SRX1053939: ES cells

◢ SRX1053948: ES cells

◢ SRX1053951: ES cells

◢ SRX1053958: ES cells

◢ SRX1053973: ES cells

◢ SRX1053977: ES cells

◢ SRX10616096: GM12878

◢ SRX10616097: GM12878

◢ SRX11374678: GM12878

◢ SRX11374679: GM12878

◢ SRX3322296: GM12878

◢ SRX3322297: GM12878

◢ SRX4909431: HCC3153

◢ SRX4909432: HCC3153

◢ SRX100538: Hep G2

◢ SRX10478224: Hep G2

◢ SRX10478225: Hep G2

◢ SRX2423815: Hep G2

◢ SRX2423816: Hep G2

◢ SRX100390: hESC H1

◢ SRX116457: hESC H1

◢ SRX186668: hESC H1

◢ SRX3694983: HL-60

◢ SRX3694988: HL-60

◢ SRX2023732: iPSC derived cardiac cells

◢ SRX2023764: iPSC derived cardiac cells

◢ SRX1053919: iPS cells

◢ SRX1053924: iPS cells

◢ SRX1053929: iPS cells

◢ SRX1053934: iPS cells

◢ SRX1053963: iPS cells

◢ SRX1053968: iPS cells

◢ SRX1053981: iPS cells

◢ SRX1053986: iPS cells

◢ SRX1053991: iPS cells

◢ SRX1053996: iPS cells

◢ SRX1054001: iPS cells

◢ SRX1054006: iPS cells

◢ SRX100516: K-562

◢ SRX116423: K-562

◢ SRX116424: K-562

◢ SRX186643: K-562

◢ SRX2423402: K-562

◢ SRX2423403: K-562

◢ SRX5457481: K-562

◢ SRX5457482: K-562

◢ SRX7135363: K-562

◢ SRX1514286: Kasumi-1

◢ SRX8064823: Lymphoblastoid cell line

◢ SRX8064824: Lymphoblastoid cell line

◢ SRX190281: MCF-7

◢ SRX2140211: MM.1S

◢ SRX11399800: NCI-H1963

◢ SRX11399801: NCI-H1963

◢ SRX11399802: NCI-H1963

◢ SRX9779520: NCI-H1963

◢ SRX4732741: Pre-B cells

◢ SRX7981741: Prostate cancer

◢ SRX7981742: Prostate cancer

◢ SRX7981743: Prostate cancer

◢ SRX7981744: Prostate cancer

◢ SRX4313202: RH-4

◢ SRX4313219: RH-4

◢ SRX4313220: RH-4

◢ SRX9562892: RH-4

◢ SRX9562897: RH-4

◢ SRX19212560: SK-N-MC

◢ SRX7643943: U-87 MG

◣ SRX059711: VCaP

◢ SRX059712: VCaP

◢ HDAC2: STRING

RAE1
MTRNR2L3
ING1
CARS2
RTN3
ATL3
ZEB1
TICRR
ITPRIPL1
NCAPH
DUX4
NLRP5
SHC1
CKS1B
FLAD1
TENT2
PMM1
NGB
RTF1
CAMTA1
FAM240C
MCF2L
EIF1AD
CST6
BANF1
AEN
ANP32E
SMYD1
KRCC1
ZDHHC24
ACTN3
ZNF559-ZNF177
ZNF559
ACSL3
HMGN4
RFPL3
GRM3
HIGD1C
CCDC34
PXDN
PC
OTUB1
RHNO1
FOXM1
RUVBL1
EEFSEC
SLC25A45
FRMD8
RAB20
SLA
ZBTB18
ULK4
WDR62
THAP8
PKDCC
ERG
NAXD
NME4
DECR2
NOVA2
TTC24
IQGAP3
HDGFL2
UNG
ALKBH2
TROAP
HERPUD2
RGS14
LMAN2
GTF3C4
DDX31
TMEM216
MTRNR2L1
CENPS-CORT
CENPS
CCDC106
U2AF2
ZNF581
ZNF580
FANCI
CEP55
GABRA2
ADHFE1
RRS1
DSCC1
TMEM40
MDGA2
VRK1
IL24
OIP5
NUSAP1
KAT5
RNASEH2C
WWP2
APBB2
TRMT112
PRDX5
JPH3
NPAS4
ZNF200
PALM2AKAP2
TNK2
RARG
SVEP1
RTL1
PTPRR
RPS6KA4
DUSP15
ASNS
TIAM1
CCT2
NOP53
SKA3
MRPL57
SLC16A8
FBXL3
RNF187
CRBN
SCUBE3
EEF1AKMT3
METTL1
CYP27B1
NPTX2
PCDH7
WIZ
ARHGAP11A-SCG5
ARHGAP11A
FBXO5
ZCCHC14
HERC3
WDR4
SUPT7L
SLC4A1AP
RAD9A
URB2
TAF5L
PRR20E
PRR20D
PRR20C
PRR20B
PRR20A
BDNF
KIF15
KIAA1143
SKIDA1
CRNKL1
CFAP61
TOMM22
ERCC1
MRPL24
RHOT2
HDGF
RAB37
DHX37
BRI3BP
TIMP2
SLC12A9
EVI5L
DPP3
PMVK
TBC1D30
GNS
SNRPD2
QPCTL
IQANK1
FAM83H
MAPK15
ATXN2L
STK32A
RRM2
DIP2A
COX8A
SCAMP2
PPP1R15B
CDKN2AIP
SYT12
CENPP
NOL8
CDC25A
PABPC1
CALML5
SCNN1A
LTBR
UNC13A
ESRRA
CATSPERZ
ZNF566
MYO7B
MILR1
IWS1
KIF20A
BRD8
COLGALT1
TIAM2
MIS18A
BLM
MYBL1
RCE1
LSAMP
C12orf66
ARHGEF7
TBRG4
PRRT1
PPT2
LIG4
ABHD13
SGO1
RRP12
MRM1
DHRS11
CDKAL1
MLF1
UBE3B
MAX
MSX1
SNX16
ZC3H18
EHD1
STC1
GPR135
POLR2J3
CNKSR3
ARSI
DOK7
FAM3C
CENPM
LOC102724770
DGCR6
SCGB3A1
SMC2
PAK4
PLAAT3
HMOX1
ZNF628
HAAO
NAT14
PITPNM3
WDR48
SCN11A
SETD4
CBR1
ZNF771
AP1G1
VAV3
KIAA0895
ANLN
TTC7A
MCFD2
FAM222B
PDXK
CASC3
DCAF4
SOX8
H4C2
H2AC4
H3C2
HRK
CX3CL1
CSH2
GH2
SYK
UTP20
DPP9
DDX19B
AARS1
OCEL1
IMPA1
NR2F6
SLC10A5
VAT1
RND2
TRAPPC6A
BLOC1S3
ETF1
IMPDH1
ZNF555
SPATA25
NEURL2
CTSA
NOL6
ERAL1
MAPKAPK3
CISH
FAM189A1
SEMA4G
PDE6D
COPS7B
POLR3GL
ANKRD34A
LIX1L
NAA40
IDH3A
AP5B1
OVOL1
GRTP1
CYRIB
SEC22C
SS18L2
ATP5MC1
ATF6B
UBE2Z
FKBPL
NKTR
NAA25
LOC100130520
CD300H
NFIC
NDUFAF6
TAS1R1
NOL9
CCNE2
ZNF618
MAPK10
BACE2
DDHD2
RNF145
EXO1
NEIL3
CLSPN
TIMM23
PLPBP
STIP1
CENPV
SPINDOC
RBM19
COX5A
ERICH5
SKA1
MTR
ACACA
SLC39A7
RXRB
RING1
HSD17B8
L3HYPDH
JKAMP
CYB5A
RGPD8
RGPD5
MND1
RGPD6
LGALS7B
PCNX3
MAP3K11
NTMT1
ZNF511
TUBGCP2
MACROD1
C11orf24
FAM207A
MCM10
GLE1
ANKRD13D
SLC24A4
PTPRN2
NAA80
IFRD2
HYAL3
UBE2C
TTLL12
RBKS
BABAM2
AIP
ZNF546
TIMELESS
MIP
UNC93B1
ALDH3B1
TMEM262
ZFPL1
CDCA5
ADAR
KCTD7
ELP1
ABITRAM
EIF3H
XPO5
POLH
DPH7
MED30
SYNE1
CSRP3
SEC13
CDC7
ASB13
LRFN4
PAQR6
BGLAP
RGL3
CFAP298-TCP10L
CFAP298
E2F2
DAZAP2
SNX15
TRNP1
PPY
KRTAP26-1
CENPH
ZNF701
HTR1F
MAMDC2
PRCP
DDIAS
ATXN7L2
ALDH3B2
CSTF1
AURKA
TMCC2
PITPNM1
UQCC2
PLXNB2
NAA50
ATP6V1A
KIFC1
THOC3
NEMP1
ZNF530
FIGNL1
TMX2
MED19
TLK1
DLL3
SELENOV
EXOSC5
BCKDHA
ZNF57
C1orf198
LRTM2
PIWIL1
FANCD2
THAP7
MRPS33
LRRC49
THAP10
ANKRD10
MTRNR2L8
CKAP2L
SLC25A36
MAPK12
MEIS2
TMEM238
TMEM190
RPL28
CLDN11
CRIM1
IL11
POLR3H
LTN1
CDC16
TRABD
HAGH
FAHD1
WASHC5
NSMCE2
GDAP1
ZNF331
RFC3
PARK7
SAC3D1
ARHGAP22
ZNF814
DHX40
CCM2L
KCNMA1
IQCA1
BRWD1
FGF14
HGH1
NPBWR2
USF2
ESCO2
PARPBP
NUP37
ZNF786
SRPRB
SYVN1
RAD54B
MSANTD4
IFNLR1
XRCC2
WFS1
FAM174C
DDX23
CIRBP
DMAC1
HOXC6
HOXC5
ART1
TXLNA
GSTP1
HEATR5A
MAP2K6
TENT4B
CIT
NLRP4
NLRP11
AFAP1
TRMT61A
CKB
MCM4
PRKDC
CPLX1
GPR150
FAM111A
TYW3
CRYZ
RBM28
CDC6
GGH
NFIX
BAZ1B
PDGFA
LAX1
MTFR2
SHF
RAB40B
GRIK4
CHRFAM7A
NOP16
HIGD2A
ZC3HAV1L
NUF2
ZC3HC1
DZIP3
CIP2A
AKT2
CCDC15
ADCK1
LIN54
ZNF23
DIABLO
METTL18
C1orf112
SHPK
CTNS
HDAC7
RPL14
CBFA2T3
EDN1
PPP1R2B
SCIN
OR2W5
HEXA
NEK2
RAD51
RECQL
GOLT1B
TMA7
CCDC51
E2F8
ATRIP
LSM8
NGRN
MESD
EBAG9
TRMT6
MCM8
VPS26C
POLR1B
SLC45A3
DNAH7
ATF5
ABR
SSH3
NIF3L1
PPIL3
SRSF7
GFOD1
SOX5
TADA2B
CCDC96
ASAP1
RAB3A
CYP4F3
C11orf95
CDC20
ELOVL1
ARRB2
PELP1
PRR5
LOC100287896
LIPT2
DERL1
RNF130
COPS7A
ZSWIM9
LIG1
ORC2
ARHGEF10
PRR5-ARHGAP8
ACSBG2
BIRC5
RCAN1
RPS6KB2
TOP2A
HIVEP1
RUNDC3B
CARNS1
SAMD12
RRP15
PDE4A
D2HGDH
FADD
PTPRCAP
QKI
KLC2
CORO1B
CABP4
GPR152
USP2
SYNJ1
MON1A
ERRFI1
RIDA
POP1
NBPF1
KIF18B
PHF19
BBS1
CPNE4
SLC35B4
PYGO2
PBXIP1
LOC101928120
NUP42
MRPL38
TRIM65
VPS26B
NCAPD3
CRTC1
MLXIP
C6orf118
EDC3
C8orf37
MRPS16
DNAJC9
BRCA1
PYCR2
SART1
PBX3
LRRC6
MLH1
EPM2AIP1
NFKBID
TYROBP
HCST
PPAT
PAICS
SF3B3
COG4
URB1
CCNB1
NUP160
GPR137
COPRS
KCNK4
BAD
ADAMTS8
PLEKHA7
RPL23A
RAB34
TLCD1
PROCA1
NEK8
PIAS1
HSF1
BOP1
MNS1
SLC29A2
ADAMTS14
THG1L
EXOSC3
SEC24B
ANKRD28
TARS3
TECPR1
PEBP4
KCNC3
RELA
PDIK1L
PIK3IP1
MBD6
DDIT3
CXCL5
C8orf33
KIF2C
DBNDD2
RAD54L
NDUFAF2
ERCC8
RAD51D
FNDC8
RCOR2
ZIM2
PEG3
POLR3F
DZANK1
PFDN6
RGL2
WDR46
STYXL1
DDX21
TSPAN33
ZHX1-C8orf76
ZHX1
POLD2
DEPDC1B
ELAVL2
METTL3
TMEM217
TBC1D22B
ID4
LRFN1
UNC45B
NLE1
NUDT2
KIF24
TSEN15
AADAT
RANGAP1
UTP23
NCAPG
TMA16
FBN1
SLC25A18
CCDC88C
TNNI1
ARFGEF2
KLHL32
LTV1
NDUFAF4
POLR2K
SPAG1
WDR81
UBAC1
PDXP
PRND
ZNF480
DDX52
FAM72C
NTAQ1
WDR61
TEDC1
CRIP1
SLC4A7
NUP54
TOMM40
SLF2
SLC25A26
ZNF585B
ZNF383
BEND3
SPEF2
PRSS56
CHRND
TM9SF1
IPO4
ASF1B
PUM3
SPCS1
GLT8D1
FARSB
TEX10
DUT
OLFM1
RBM14-RBM4
RBM14
BCKDHB
KIF6
SRRM4
SOD2
CCNA2
PPFIA3
C19orf73
RPLP0
GCN1
ZNF131
ALDH3A2
SF3B2
GAL3ST3
PIK3CD
RIPPLY3
SEL1L2
MACROD2
PKIA
SSBP1
CCDC59
SAP30BP
RECQL5
ITFG2
USP16
RWDD2B
AKAP1
CFAP410
PPRC1
MED20
BYSL
TPX2
E2F5
LRPPRC
NCL
ZCCHC7
SASS6
DNAJC25-GNG10
DNAJC25
LRP2BP
ANKRD37
LARP4
FAM186A
FAM200B
MAD2L1
SLC35C2
DYRK1B
C1orf54
TMEM120B
RPL8
PRC1
ELOVL2
APH1A
UTS2B
CCDC50
ZNF517
PAPSS1
SPTBN2
TSEN2
CENPE
TAOK1
ENDOD1
NUP214
UBE2L3
RIMBP3B
RIMBP3C
NBN
ZNRD2
FAM89B
EHBP1L1
DNAJC11
GPD1
COX14
TRIB3
ANAPC7
CDCP1
SLC5A8
TMEM248
DIAPH3
RBM4B
PLK4
TAF9
RAD17
AK6
OXR1
RSL1D1
MTPN
LUZP6
TACR1
SMYD5
TBC1D15
TBC1D16
CCDC40
ZNF180
XYLB
SLC25A46
NR2C1
ODF2
HASPIN
CDC42EP2
ACTR2
PIGU
MCM7
AP4M1
FBXO48
APLF
ADPGK
XKR9
LACTB2
RPL6
PTPN11
SH3BGR
LCA5L
ZNF197
NT5M
CNNM1
JAK3
QTRT2
CCDC191
PNPT1
RNMT
FAM210A
MACIR
TRAIP
NOP2
ABHD12
ADAMTS3
PI4KB
ZNF385D
WDR74
STX5
IDH3B
CDK7
PSME3
BECN1
MTBP
MRPL13
RAD18
SF3A1
CCDC157
RPN2
MROH8
FKBP3
FANCM
TMEM71
UBE2V2
TIGD3
PHF20L1
FBL
CHFR
UBD
VPS33A
TYMS
TYMSOS
RPA2
ATG5
PPP1CA
EID1
MMP28
TNS3
PEAK3
KYAT1
ZNF473
VRK3
TTK
LRRC8A
SMIM41
UAP1L1
ATG101
CCDC150
CDK1
LTO1
SAPCD2
TMEM241
SEH1L
PLCG1
RELB
MRPL48
PUS7
DEPTOR
SDAD1
KNOP1
IQCK
RINT1
ZNF273
MSL2
MICU2
ZBTB7B
LENEP
ALMS1
ARL2
CCDC86
SMN2
SMN1
ABCB6
VARS1
MRPL3
SNRPD1
ZSCAN2
CSTB
SYNRG
TONSL
STMN3
RTEL1
ACYP2
CDK11A
TRIP12
FBXO36
CDCA7
C12orf43
DCK
FGF8
PSME4
RNF165
NPM3
KIF5C
TMEM242
MRPL27
EME1
YIF1A
TMEM151A
GPAM
GTSE1
TBC1D31
CDC5L
FAM53C
CDC25C
FBXO43
AKNA
TMED5
CCDC18
USHBP1
BABAM1
PARP4