ChIP-Atlas: Target genes

Potential target genes for HDAC2

Query protein: HDAC2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX11374679 | GM12878
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC2's Target genes

◢ HDAC2: Average

◢ SRX16386913: 293

◢ SRX3010110: A549

◢ SRX3010111: A549

◢ SRX24188777: BJ

◢ SRX24188786: BJ

◢ SRX20550182: BT67

◢ SRX20550183: BT67

◢ SRX20550184: BT67

◢ SRX20599715: Caco-2

◢ SRX20599717: Caco-2

◢ SRX017704: CD4+ T cells

◢ SRX687555: Erythroid progenitors

◢ SRX1053939: ES cells

◢ SRX1053948: ES cells

◢ SRX1053951: ES cells

◢ SRX1053958: ES cells

◢ SRX1053973: ES cells

◢ SRX1053977: ES cells

◢ SRX10616096: GM12878

◢ SRX10616097: GM12878

◢ SRX11374678: GM12878

◣ SRX11374679: GM12878

◢ SRX3322296: GM12878

◢ SRX3322297: GM12878

◢ SRX4909431: HCC3153

◢ SRX4909432: HCC3153

◢ SRX100538: Hep G2

◢ SRX10478224: Hep G2

◢ SRX10478225: Hep G2

◢ SRX2423815: Hep G2

◢ SRX2423816: Hep G2

◢ SRX100390: hESC H1

◢ SRX116457: hESC H1

◢ SRX186668: hESC H1

◢ SRX3694983: HL-60

◢ SRX3694988: HL-60

◢ SRX2023732: iPSC derived cardiac cells

◢ SRX2023764: iPSC derived cardiac cells

◢ SRX1053919: iPS cells

◢ SRX1053924: iPS cells

◢ SRX1053929: iPS cells

◢ SRX1053934: iPS cells

◢ SRX1053963: iPS cells

◢ SRX1053968: iPS cells

◢ SRX1053981: iPS cells

◢ SRX1053986: iPS cells

◢ SRX1053991: iPS cells

◢ SRX1053996: iPS cells

◢ SRX1054001: iPS cells

◢ SRX1054006: iPS cells

◢ SRX100516: K-562

◢ SRX116423: K-562

◢ SRX116424: K-562

◢ SRX186643: K-562

◢ SRX2423402: K-562

◢ SRX2423403: K-562

◢ SRX5457481: K-562

◢ SRX5457482: K-562

◢ SRX7135363: K-562

◢ SRX1514286: Kasumi-1

◢ SRX8064823: Lymphoblastoid cell line

◢ SRX8064824: Lymphoblastoid cell line

◢ SRX190281: MCF-7

◢ SRX2140211: MM.1S

◢ SRX11399800: NCI-H1963

◢ SRX11399801: NCI-H1963

◢ SRX11399802: NCI-H1963

◢ SRX9779520: NCI-H1963

◢ SRX4732741: Pre-B cells

◢ SRX7981741: Prostate cancer

◢ SRX7981742: Prostate cancer

◢ SRX7981743: Prostate cancer

◢ SRX7981744: Prostate cancer

◢ SRX4313202: RH-4

◢ SRX4313219: RH-4

◢ SRX4313220: RH-4

◢ SRX9562892: RH-4

◢ SRX9562897: RH-4

◢ SRX19212560: SK-N-MC

◢ SRX7643943: U-87 MG

◢ SRX059711: VCaP

◢ SRX059712: VCaP

◢ HDAC2: STRING

DUX4
H2BC17
H2AC17
OR2B2
GSTA4
FRG2C
CCDC107
ARHGEF39
SIT1
RAB11A
METTL26
WFIKKN1
LOC102724770
DGCR6
TMEM107
BORCS6
UBC
DNAJB4
PARP16
HSPA6
FCGR3A
H4C8
ALOXE3
HES7
BRMS1
B4GAT1
SACM1L
MPZL1
DCT
FBXO31
MAP1LC3B
NDUFS7
CRYAA2
CRYAA
BCAR3
LASP1
CCDC200
MED16
TRIM7
ELF1
WBP4
MYNN
ACTRT3
TMEM259
CNN2
ZNF184
RNASE4
ANG
PCGF2
NPR1
ILF2
PRMT5
POLR3E
PLXDC1
KNL1
NCOA7
LUC7L2
FMC1-LUC7L2
FMC1
ZNF839
ZBED9
OR1F1
LAMP1
PSMA3
PTPN6
C12orf57
OR6S1
MTRNR2L1
SHF
H1-2
H3C3
TMEM242
EAPP
ZFP36
PLEKHG2
TAF12
FCHSD2
FRG2
FCGR3B
DPP9
C8orf37
POLG
H4C12
H4C11
H2BC14
H2AC14
KMT5B
MDM4
H3C13
H2BC18
HMGN4
VPS35
H4C3
H1-6
TIA1
PCYOX1
H2BC15
H2AC15
SRSF7
SPRTN
EXOC8
H4C13
H3C11
H2AC16
H1-5
ANXA2
WASF2
H4C6
H1-3
H3C7
H4C7
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
LTA4H
DNAJB1
H2BC9
NKX1-1
H4C2
H2AC4
H3C2
H4C1
RPL12
LRSAM1
ZBTB4
SLC35G6
POLR2A
CLP1
ZDHHC5
H2BC5
H1-4
PRSS16
H2BC21
H2AC21
H2AC20
ACTB
H3C1
H1-1
H2BC11
H2AC11
H4C9
H2BC3
SRSF3
HMOX1
H2AC12
H2BC12
TRMO
WASHC2C
VAMP2
CYP4F11
H3C8
H2BC10
H3C6
FSCN1
WDR74
STX5
RDH5
ITGA7
BLOC1S1
FUS
HEXA
POLDIP3
SMARCC2
VPS33A
CASC3
TSR3
GNPTG
PHRF1
NBN
SRFBP1
RNASET2
CENPBD1
H2BC8
H2AC8
H3C4
H4C4
H2BC6
HLTF
ZNF335
SIRT4
PARP2
CCNB1IP1
MAT2A
TMEM185B
CBWD5
MARCHF8
MICU2
WASHC2A
CLSPN
KCNC3
NAGK
CYP20A1
IL4I1
ATF5
NUP62
H2BC4
H2AC6
C17orf97
COMMD4
SRSF6
MLH3
ING1
CARS2
AFF1
SLTM
BRPF1
CDKN2A
H4-16
H2AJ
C12orf65
NCOA5
SAE1
INTS5
GANAB
STARD7
VAMP1
RPS29
IQCG
RPL35A
LMLN
RPS5
VCP
FANCG
EIF4A3
TUBA1B
CMTR2
UNK
H3-3B
RABIF
TRAF7
RAB26
H3C12
POM121L2
H2AC7
H4C5
H2BC7
UBE2S
STX10
IER2
SLCO5A1
EHD1
TXN2
KIF2C
NARF
CBWD2
CYBC1
HMGA1
FCMR
CCDC59
HNRNPA2B1
CBX3
PIP4P1
PNP
CRCP
NEMF
TCAIM
PCNP
ZSCAN30
LIG4
ABHD13
HAGH
FAHD1
DDIT4
GTF2A1
DENND6A
POLR2J3
C6orf62
GSK3B
CCDC115
IMP4
H2BU1
H2AW
TSPOAP1
COG6
CAP1
CCT7
PRADC1
PTPN23
BRD2
ZNF790
POLR3B
AP2S1
ARHGAP35
TSEN34
S100A13
S100A1
CHTOP
ERAP1
CTDP1
GPR137
ARMC5
STX3
PPP1R35
ZCWPW1
MEPCE
SNX33
IMP3
SPATS2
SUCO
USP42
SFSWAP
PCIF1
TIMM13
BCLAF1
CBWD1
CALM1
KLF7
NUDCD2
HMMR
CALM2
ANKRD26
MAGOHB
RNF169
RPP38
ACBD7
CD320
H3C10
H2BC13
H2AC13
CBWD3
CD74
GARS1
EIF1
RPL5
SPATA25
NEURL2
CTSA
CLK1
EXOSC9
CDC7
MRPL54
APBA3
RAX2
ATN1
ZC3H10
RPL41
TRA2B
SMARCE1
VPS11
MAP2K7
ZFP69B
PREB
PRR30
ZNF598
NPW
NFKBIZ
LOC100287896
LIPT2
NPAS4
HTR5A
MTRNR2L2
MSH3
DHFR
GSN
TDRD7
XKR7
RAB14
IQSEC3
MTRNR2L8
SPTAN1
CPLX2
ZNF77
GBA
CAMTA1
SMIM17
LMLN2
LIN28A
NBPF1
ZNF555
IFT46
ARCN1
CEBPE
INSM2
KIF5C
ARID3B
RIPPLY2
CYB5R4
ART1
UTP20
SSBP1
NUF2
FAM24A
GAS8
STAT1
PAXBP1
SRA1
SLC35A4
APBB3
NME1-NME2
NME1
PRRC2B
KXD1
CRNKL1
CFAP61
RRP15
NUP214
RBM48
PEX1
LPIN1
FANCD2
SERPIND1
PSMD9
HPD
RAB42
TMEM101
UTP25
TIPARP
NAGPA
ZMPSTE24
KCTD18
RNF187
RAB37
TRMT1
NACC1
ATP6V0D1
AGRP
TTC26
MTFR2
AFAP1
POLR3H
AHCY
CDKN1A
STX16
KCNH7
TRIP4
PCLAF
QTRT1
CRBN
TMEM248
PPT1
YJU2
RBM19
SUMF1
HPCA
IBA57
RTBDN
MAST1
SPNS1
USP35
KCTD21
EXO1
OSCAR
NDUFA3
SEPTIN9
DLGAP3
EEF1AKMT3
SCFD2
MAMDC2
WASHC5
NSMCE2
BARHL1
ZSWIM1
LAT
ZCCHC7
PDE6D
COPS7B
SNAP25
USP30
ZEB1
TMCO2
POLM
RAD23A
CALR
TMEM262
DHDDS
NEK2
TTLL4
SLX1B
SLX1A
BOLA2B
BOLA2
EIF2D
RPS19
TATDN3
NSL1
ASMTL
NOS3
BHLHA15
SLC39A3
CELSR3
TMEM120A
P4HA1
STX18
FARSA
CCDC106
ZNF23
SULT1A4
SULT1A3
UBFD1
EARS2
METTL1
CYP27B1
DBNL
PRR14
FBRS
U2AF2
TIGAR
BCL7B
SPDYE14
SPDYE10P
MARCHF4
CENPP
SMG8
NR1H2
VPS50
HEPACAM2
IDH3B
PWWP2A
CCNG2
KIF3B
ITGB3BP
EFCAB7
KAT5
BIRC5
FAM227B
DTWD1
TTC24
IQGAP3
TDRKH
RHEBL1
TM9SF1
IPO4
BNIP3L
PDE4A
GPR107
NAGS
ZNF581
ZNF580
RABL2B
RBBP5
SOD2
NOL8
SPATA2
RBM8A
DYNC2I1
PDXK
PYY
TPH2
DHRS3
UNG
ALKBH2
CHGB
UBE2H
RAP1GAP
TMCO3
DCUN1D2
RNASEH2C
GTPBP6
TIMM17A
LMOD1
HMGB1
MIS18A
CDK7
DNMT3B
LARP1
SPOP
EPHA10
RABGEF1
WDR4
RTTN
SEBOX
RABGAP1L
SARS1
SUPT7L
SLC4A1AP
SVOP
GATB
BOLA2-SMG1P6
RFC1
DCLRE1B
AP4B1
NFE2L2
ZC3H18
JUNB
NDUFS3
KBTBD4
RBM28
PXN
PHC2
PSME3
BECN1
EIF1AD
CST6
BANF1
CDT1
NUP107
NEIL3
TRUB2
COQ4
WTAP
APRT
MTF2
PPIL2
COX6A1
SLC45A4
PRR5L
N6AMT1
MRM3
GLOD4
DHX40
DNAJC5
FAM228B
COMMD2
FAM180B
POLR3F
DZANK1
HIBADH
UBE2L3
SLC12A9
THAP9
SHC1
SEC31A
MRPL48
COQ8A
PI16
KLHL18
KIF9
C6orf89
RFX1
SF3A3
CRYBG1
RAD51
RTN3
MAPK8IP2
MRPL27
EME1
WDR36
INTS12
GSTCD
COMMD9
ZFPL1
CDCA5
CDC14B
PDE1C
GTF3C3
EPN1
C2orf66
CNOT3
ATL3
CPPED1
ATG9B
KIAA0895
KNTC1
KYAT1
TEN1
ACOX1
CCDC77
HOOK2
FBXO5
FNBP1
KIF18B
NRL
NUDT15
L1CAM
CBLL1
TRIAP1
ITPRIPL1
PCNA
PAFAH2
CSTF1
AURKA
CDK5RAP1
DRG2
TP53I3
SF3B6
POLD1
TXLNA
USP2
MFSD1
GPATCH3
CADM3
CCNA2
OLFML2A
SLC25A51
NCAPH
MYBL2
BIRC2
RNF181
ASF1A
RIMBP3B
RTN4
TRIT1
ENPP3
C12orf66
CCDC88A
STAM2
TTC31
CCDC142
PSEN2
ZNF852
IL1R1
ALAD
RTF2
DUS3L
ABCB8
VIM
BAIAP2
COL23A1
OGDH
TSFM
EBAG9
FHL3
VTA1
NMBR
TOMM22
AP3S2
PFDN4
RRP12
VARS2
GTF2H4
ATF3
IPO11
DIMT1
BCAS3
NSUN4
LIMS1
SMYD5
HDAC2
LRRC59
POM121
USP54
AMZ2
TMEM199
POLDIP2
RGPD1
RGPD2
PEX3
ADAT2
YARS1
UBL5
S100PBP
PHF19
MRPL40
HIRA
COASY
CKS1B
ASF1B
FLAD1
TMBIM4
RIMBP3C
CRKL
USPL1
KDM3A
WBP1
SWSAP1
TBRG4
TRAPPC6A
BLOC1S3
KIF20A
BRD8
SPG21
EDC3
ATR
SSNA1
ANAPC2
CCDC146
ID1
C16orf71
ANKS3
NOP16
HIGD2A
HNRNPF
STAT3
KMT2D
BHLHE40
MRPL45
GTF2H3
EIF2B1
ZNF764
OPA1
GPN2
HUS1
YTHDF2
UBE2Q1
CHRNB2
DCAF11
PGAM5
NOTCH2
UTP11
ATG14
KLHL20
IGF2BP3
BCAS4
BLCAP
PLEKHM3
TOP3B
UBE2O
DDX18
AANAT
MLX
ERCC1
ARHGDIA
COMMD7
KIAA1586
TMEM230
ARFGEF2
BUB1B
CWC25
TDG
ASIC3
ZNF684
CCDC86
MED23
DPY19L4
CFAP54
ZCCHC14
GOLGA7
CMSS1
TRMT6
MCM8
ADNP
P2RX6
SHOX2
HSD17B1
MYCL
CKS2
UBE3B
CORO1A
RGS3
CKAP2L
SECISBP2
KCNJ14
GRWD1
MRPL44
UNKL
SUPV3L1
BSDC1
PC
HNRNPD
KLHL32
C8orf33
CAND1
ESCO2
AP1M1
FBXL13
ARMC10
CDC25B
RGL1
NUP42
D2HGDH
VPS37D
MTIF2
ZC3HC1
CD19
GDAP1
NNAT
CHCHD1
CYRIB
DUSP1
CYB561D1
SASS6
MTBP
MRPL13
MAD2L2
E2F6
CLK3
NR6A1
MACC1
NUP35
TBC1D19
KIAA0895L
ELL
ACVR1
GNG14
AAR2
SAP30BP
RECQL5
GTF3C4
DDX31
LTV1
INTS7
DTL
SLC24A1
CACTIN
FAM72C
RINL
INKA2
THAP7
RABEP2
PDE4DIP
ARPC5
KLF2
NOXO1
ZBTB45
ATAD2
ADAMTS14
ESYT2
CFAP298-TCP10L
CFAP298
RAB5IF
NOL6
TUBA1C
PFDN6
CA4
SNRPE
NOL7
ITFG2
AVEN
LSM5
AVL9
FANCI
NFIB
PMVK
TMEM208
LRRC29
LTN1
RAB33A
WDR70
NUP155
TEAD1
DHX37
BRI3BP
SGO1
INTS14
SCRT1
TIMM9
KIAA0586
DZIP3
CIP2A
RGL2
C5orf51
MRPS23
CEP135
ZGRF1
LARP7
UFD1
CDC45
TMEM186
PMM2
RCC1
STMN3
RTEL1
ERMAP
SKA3
MRPL57
PIKFYVE
TTC27
NMNAT1
LZIC
YIF1A
TMEM151A
PGBD5
EBNA1BP2
CFAP57
QTRT2
PPP1R11
POLR1H
CCDC191
PAF1
PTPN4
TFB2M
CNST
NAXE
SPIDR
EIF3F
PPWD1
MGAT5
GPATCH4
CENPK
PIGU
COX16
TMEM41A
POLR3D
SKA1
SVBP
CORO7-PAM16
CORO7
URB1
MINDY4
MRPS16
NAT10
PUS10
PEX13
NUP54
NEUROD4
RPTOR
PRCP
DDIAS
PTPRH
DNAJC25-GNG10
DNAJC25
KLF1
GCDH
DNASE2
RBM42
DGAT1
TACO1
ZNF830
PTPRF
CCT6B
ANK1
TRAPPC9
PBK
TOMM40
NOTCH2NLA
SMARCD2
FXN