ChIP-Atlas: Target genes

Potential target genes for HDAC2

Query protein: HDAC2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX11374678 | GM12878
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC2's Target genes

◢ HDAC2: Average

◢ SRX16386913: 293

◢ SRX3010110: A549

◢ SRX3010111: A549

◢ SRX24188777: BJ

◢ SRX24188786: BJ

◢ SRX20550182: BT67

◢ SRX20550183: BT67

◢ SRX20550184: BT67

◢ SRX20599715: Caco-2

◢ SRX20599717: Caco-2

◢ SRX017704: CD4+ T cells

◢ SRX687555: Erythroid progenitors

◢ SRX1053939: ES cells

◢ SRX1053948: ES cells

◢ SRX1053951: ES cells

◢ SRX1053958: ES cells

◢ SRX1053973: ES cells

◢ SRX1053977: ES cells

◢ SRX10616096: GM12878

◢ SRX10616097: GM12878

◣ SRX11374678: GM12878

◢ SRX11374679: GM12878

◢ SRX3322296: GM12878

◢ SRX3322297: GM12878

◢ SRX4909431: HCC3153

◢ SRX4909432: HCC3153

◢ SRX100538: Hep G2

◢ SRX10478224: Hep G2

◢ SRX10478225: Hep G2

◢ SRX2423815: Hep G2

◢ SRX2423816: Hep G2

◢ SRX100390: hESC H1

◢ SRX116457: hESC H1

◢ SRX186668: hESC H1

◢ SRX3694983: HL-60

◢ SRX3694988: HL-60

◢ SRX2023732: iPSC derived cardiac cells

◢ SRX2023764: iPSC derived cardiac cells

◢ SRX1053919: iPS cells

◢ SRX1053924: iPS cells

◢ SRX1053929: iPS cells

◢ SRX1053934: iPS cells

◢ SRX1053963: iPS cells

◢ SRX1053968: iPS cells

◢ SRX1053981: iPS cells

◢ SRX1053986: iPS cells

◢ SRX1053991: iPS cells

◢ SRX1053996: iPS cells

◢ SRX1054001: iPS cells

◢ SRX1054006: iPS cells

◢ SRX100516: K-562

◢ SRX116423: K-562

◢ SRX116424: K-562

◢ SRX186643: K-562

◢ SRX2423402: K-562

◢ SRX2423403: K-562

◢ SRX5457481: K-562

◢ SRX5457482: K-562

◢ SRX7135363: K-562

◢ SRX1514286: Kasumi-1

◢ SRX8064823: Lymphoblastoid cell line

◢ SRX8064824: Lymphoblastoid cell line

◢ SRX190281: MCF-7

◢ SRX2140211: MM.1S

◢ SRX11399800: NCI-H1963

◢ SRX11399801: NCI-H1963

◢ SRX11399802: NCI-H1963

◢ SRX9779520: NCI-H1963

◢ SRX4732741: Pre-B cells

◢ SRX7981741: Prostate cancer

◢ SRX7981742: Prostate cancer

◢ SRX7981743: Prostate cancer

◢ SRX7981744: Prostate cancer

◢ SRX4313202: RH-4

◢ SRX4313219: RH-4

◢ SRX4313220: RH-4

◢ SRX9562892: RH-4

◢ SRX9562897: RH-4

◢ SRX19212560: SK-N-MC

◢ SRX7643943: U-87 MG

◢ SRX059711: VCaP

◢ SRX059712: VCaP

◢ HDAC2: STRING

DUX4
H2BC17
H2AC17
OR2B2
GSTA4
CCDC107
ARHGEF39
SIT1
FRG2C
PARP16
H4C8
HSPA6
FBXO31
MAP1LC3B
UBC
TMEM107
BORCS6
FCGR3A
BRMS1
B4GAT1
NDUFS7
CCDC200
RAB11A
BCAR3
LOC102724770
DGCR6
LAMP1
ALOXE3
HES7
METTL26
WFIKKN1
MED16
DNAJB4
SACM1L
LASP1
ELF1
WBP4
LUC7L2
FMC1-LUC7L2
FMC1
RNASE4
ANG
PLXDC1
ZBED9
PRMT5
MYNN
ACTRT3
CRYAA2
CRYAA
TRIM7
ZNF184
MPZL1
PCGF2
NKX1-1
PSMA3
OR1F1
DCT
TMEM259
CNN2
H4C12
H4C11
H2BC15
H2AC15
NPR1
ILF2
ZNF839
KMT5B
EAPP
POLR3E
MTRNR2L1
H2BC5
H1-4
KNL1
TAF12
H1-2
H3C3
H4C3
H1-6
ACTB
FCHSD2
H3C6
H4C6
H1-3
LTA4H
HMGN4
H4C2
H4C1
H3C1
H1-1
OR6S1
RDH5
ITGA7
BLOC1S1
MDM4
H2BC14
H2AC14
FRG2
PTPN6
C12orf57
ZFP36
PLEKHG2
XRCC5
SRSF7
DPP9
H2BC3
PRSS16
VPS33A
NCOA7
POLG
FCGR3B
SMARCC2
H2BC11
H2AC11
H4C9
H2AC4
H3C2
TRMO
TIA1
PCYOX1
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
SPRTN
EXOC8
SHF
TMEM242
H3C13
H2BC18
H2BC21
H2AC21
H2AC20
H3C8
H2BC10
SAE1
H4C13
H3C11
H2AC16
H1-5
C8orf37
POM121L2
C17orf97
PCGF1
LBX2
TLX2
TSSK4
MDP1
CHMP4A
RNASET2
NBN
HDAC4
H2BC8
H2AC8
WASHC2A
EIF4A3
ZBTB4
SLC35G6
POLR2A
CYP4F11
WDR74
STX5
RPL12
LRSAM1
CCDC115
IMP4
PARP2
CCNB1IP1
POLDIP3
ANXA2
POLR3B
CLP1
ZDHHC5
MICU2
SGF29
CBWD5
COMMD4
H4-16
H2AJ
HEXA
HNRNPA2B1
CBX3
VPS35
H2AC12
H2BC12
SNRPB
H3C4
VAMP2
H2AC7
H4C5
H2BC7
SIRT4
H3C7
H4C7
CTDP1
STARD7
PIH1D1
ALDH16A1
RSRP1
SLCO5A1
GBA
H2BC9
MARCHF8
RPLP0
GCN1
C6orf62
ZNF84
LZTR1
TMEM238
TMEM190
RPL28
WASF2
FUS
COG6
SNRNP70
CCND3
TAF8
UBE2S
E2F3
PAXBP1
LIG4
ABHD13
MPZL3
TRA2B
HMGA1
CBWD2
CASC3
RPL5
PHRF1
DNAJB1
ANKRD26
NARF
CALM1
CYBC1
KNTC1
EXD1
CHP1
SRSF6
USP42
H2BC4
H2AC6
SRFBP1
H4C4
H2BC6
POLR2J3
SRSF3
INO80C
TRAF7
RAB26
EIF4A2
CTSO
NUDT15
TMCO6
NDUFA2
IK
POLE4
CCDC106
U2AF2
GABARAP
ELP5
CTDNEP1
PHF23
DVL2
DNAJC25-GNG10
DNAJC25
GTF2A1
ZSCAN30
PTPN2
KCNC3
SPAAR
HRCT1
MIS12
DERL2
SUCO
POC5
MRPS14
NEMF
COMMD1
HNRNPH1
C12orf65
CCT4
TATDN1
NDUFB9
NCOA5
ZNF706
H3C10
H2BC13
H2AC13
MLH3
EIF3A
TXN2
FAM71E1
EMC10
CDKN1A
RAP1GAP
BCLAF1
LCMT2
ADAL
CBWD1
PCIF1
PNKD
GPBAR1
AAMP
KLF7
ZNF143
HMBS
H2AX
DPAGT1
H3C12
ZNF720
POMZP3
NCL
XRN2
CENPBD1
LEO1
RPP38
ACBD7
IL4I1
ATF5
NUP62
DENND6A
INTS5
GANAB
RPS5
EXOSC9
FTL
FSCN1
TSR3
GNPTG
BRWD1
SREK1
CKS2
SECISBP2
RPS29
NAT10
CBWD3
ZNHIT2
FAU
CBWD6
TM7SF2
ZNF598
NPW
WASHC2C
TECR
SBNO1
SYCE2
CD74
MRPS16
DNAJC9
TK2
CKLF-CMTM1
CKLF
UQCC2
GSK3B
EHD1
RCCD1
HMOX1
MRPL2
KLC4
CUL7
AFF1
NAGK
SLC3A2
KMT2E
XRCC2
IFRD1
LSM4
STK35
SMIM11B
SMIM11A
ING1
CARS2
PUS7
RINT1
GPR137
EMC4
DAGLB
PXK
GNG14
GTF3C5
AARS2
RIPK1
DHPS
C2CD5
RCE1
FAM133B
YBEY
MCM3AP
SHCBP1
PSPC1
TMEM87A
GANC
TUBA1B
MRPL17
PWWP3A
ZNF721
PIGG
GTF3A
ZNF274
COX18
MAGOHB
TNIP1
CRCP
C17orf75
ZNF207
NCAPD2
MRPL51
ZNF518A
PCNA
TMEM230
C6orf47
APOM
BAG6
CDS2
FAM83D
MRPL54
APBA3
DEPDC1B
RAX2
EXOSC8
ALG5
ZNF335
WDR62
THAP8
PTMA
EIF3D
WDR5B
ZNF770
CLSPN
H2BU1
H2AW
UNK
H3-3B
SMARCE1
OR2V2
HAGH
FAHD1
POU2F1
CYP20A1
TMEM175
GAK
NDST2
NUDCD2
HMMR
SPATA25
NEURL2
CTSA
ZSWIM1
MCRS1
PAPLN
BRD2
MCUR1
SERINC5
MAP2K7
PREB
PRR30
FRG1
MTHFD2
TPCN1
DDX5
POLG2
CIPC
IQCD
SEH1L
UBE2M
CHMP2A
ING5
KIF2C
NOL10
STAT6
GBE1
ATF4
RPL23
GARS1
SRSF5
S100A13
S100A1
CHTOP
TCAIM
LOC100287896
LIPT2
C6orf226
ARMC5
EPM2A
RPL3
NBEAL2
CCDC12
MAT2A
ZNF790
PPIA
IGFBP4
TUBGCP5
HYLS1
ABHD4
DAD1
VRK2
ZNF567
ERAP1
PDE7A
AZIN1
DENR
TSEN34
EIF3L
ANKRD54
DUS3L
PRR22
HEXIM1
ZZEF1
CYB5D2
ZNF507
PPAN-P2RY11
PPAN
P2RY11
EIF3G
RAD51AP1
C12orf4
SPTAN1
PPP1R35
ZCWPW1
MEPCE
TRIM27
RITA1
DDX54
MRPL53
MOGS
CEP295
ARPC1A
DGKH
TMEM185B
CAP1
POLR2B
NOA1
SSNA1
ANAPC2
ELMO1
TBCA
SLC35F5
RPF1
C19orf48
IRF8
SH3BP5L
LSM14A
EEF2
TSPOAP1
CSE1L
LIN37
PROSER3
HSPB6
HLA-DQA1
STAT1
LENG8
RAD23A
CALR
FARSA
EIF1
NFYC
ACAD9
EIF3B
TIMM13
MYPOP
SLC9B2
NDUFA12
AMZ2
TMEM250
TMX1
NPAS4
HTR5A
MTRNR2L2
MSH3
DHFR
GSN
TDRD7
XKR7
RAB14
IQSEC3
MTRNR2L8
CPLX2
ZNF77
CAMTA1
SMIM17
LMLN2
LIN28A
NBPF1
ZNF555
IFT46
ARCN1
CEBPE
INSM2
KIF5C
ARID3B
RIPPLY2
CYB5R4
ART1
UTP20
SSBP1
NUF2
FAM24A
GAS8
SRA1
SLC35A4
APBB3
NME1-NME2
NME1
PRRC2B
KXD1
CRNKL1
CFAP61
RRP15
NUP214
RBM48
PEX1
LPIN1
FANCD2
SERPIND1
PSMD9
HPD
RAB42
TMEM101
UTP25
TIPARP
NAGPA
ZMPSTE24
KCTD18
RNF187
RAB37
TRMT1
NACC1
ATP6V0D1
AGRP
TTC26
MTFR2
AFAP1
POLR3H
AHCY
STX16
KCNH7
TRIP4
PCLAF
QTRT1
CRBN
TMEM248
PPT1
YJU2
RBM19
SUMF1
HPCA
IBA57
RTBDN
MAST1
SPNS1
USP35
KCTD21
EXO1
OSCAR
NDUFA3
SEPTIN9
DLGAP3
EEF1AKMT3
SCFD2
MAMDC2
WASHC5
NSMCE2
BARHL1
LAT
ZCCHC7
PDE6D
COPS7B
SNAP25
USP30
ZEB1
TMCO2
POLM
TMEM262
DHDDS
NEK2
TTLL4
SLX1B
SLX1A
BOLA2B
BOLA2
EIF2D
RPS19
TATDN3
NSL1
ASMTL
NOS3
BHLHA15
SLC39A3
CELSR3
TMEM120A
P4HA1
STX18
ZNF23
SULT1A4
SULT1A3
UBFD1
EARS2
METTL1
CYP27B1
DBNL
PRR14
FBRS
TIGAR
BCL7B
SPDYE14
SPDYE10P
MARCHF4
CENPP
SMG8
NR1H2
VPS50
HEPACAM2
IDH3B
PWWP2A
CCNG2
KIF3B
ITGB3BP
EFCAB7
KAT5
BIRC5
FAM227B
DTWD1
TTC24
IQGAP3
TDRKH
RHEBL1
TM9SF1
IPO4
BNIP3L
PDE4A
GPR107
NAGS
ZNF581
ZNF580
RABL2B
RBBP5
SOD2
NOL8
SPATA2
RBM8A
DYNC2I1
PDXK
PYY
TPH2
DHRS3
UNG
ALKBH2
CHGB
UBE2H
TMCO3
DCUN1D2
RNASEH2C
GTPBP6
TIMM17A
LMOD1
HMGB1
MIS18A
CDK7
DNMT3B
LARP1
SPOP
EPHA10
RABGEF1
WDR4
RTTN
SEBOX
RABGAP1L
SARS1
SUPT7L
SLC4A1AP
SVOP
GATB
BOLA2-SMG1P6
RFC1
DCLRE1B
AP4B1
NFE2L2
ZC3H18
JUNB
NDUFS3
KBTBD4
RBM28
PXN
PHC2
PSME3
BECN1
EIF1AD
CST6
BANF1
CDT1
NUP107
NEIL3
TRUB2
COQ4
WTAP
APRT
MTF2
PPIL2
COX6A1
SLC45A4
PRR5L
N6AMT1
MRM3
GLOD4
DHX40
DNAJC5
FAM228B
COMMD2
FAM180B
CCDC59
POLR3F
DZANK1
HIBADH
UBE2L3
SLC12A9
THAP9
SHC1
SEC31A
MRPL48
COQ8A
PI16
KLHL18
KIF9
C6orf89
RFX1
SF3A3
CRYBG1
RAD51
RTN3
MAPK8IP2
MRPL27
EME1
WDR36
INTS12
GSTCD
COMMD9
ZFPL1
CDCA5
CDC14B
PDE1C
GTF3C3
EPN1
C2orf66
CNOT3
ATL3
CPPED1
ATG9B
KIAA0895
KYAT1
TEN1
ACOX1
CCDC77
HOOK2
FBXO5
FNBP1
KIF18B
NRL
L1CAM
CBLL1
TRIAP1
ITPRIPL1
PAFAH2
CSTF1
AURKA
CDK5RAP1
DRG2
TP53I3
SF3B6
POLD1
TXLNA
USP2
MFSD1
GPATCH3
CADM3
CCNA2
OLFML2A
SLC25A51
NCAPH
MYBL2
BIRC2
RNF181
ASF1A
RIMBP3B
RTN4
TRIT1
ENPP3
C12orf66
CCDC88A
STAM2
TTC31
CCDC142
PSEN2
ZNF852
IL1R1
ALAD
RTF2
ABCB8
VIM
BAIAP2
COL23A1
OGDH
TSFM
EBAG9
FHL3
VTA1
NMBR
TOMM22
AP3S2
PFDN4
RRP12
VARS2
GTF2H4
ATF3
IPO11
DIMT1
BCAS3
NSUN4
LIMS1
SMYD5
HDAC2
LRRC59
POM121
USP54
TMEM199
POLDIP2
RGPD1
RGPD2
PEX3
ADAT2
YARS1
UBL5
S100PBP
PHF19
MRPL40
HIRA
COASY
CKS1B
ASF1B
FLAD1
TMBIM4
RIMBP3C
CRKL
USPL1
KDM3A
WBP1
SWSAP1
TBRG4
TRAPPC6A
BLOC1S3
KIF20A
BRD8
SPG21
EDC3
ATR
CCDC146
ID1
C16orf71
ANKS3
NOP16
HIGD2A
HNRNPF
STAT3
KMT2D
BHLHE40
MRPL45
GTF2H3
EIF2B1
ZNF764
OPA1
GPN2
HUS1
YTHDF2
UBE2Q1
CHRNB2
DCAF11
PGAM5
NOTCH2
UTP11
ATG14
KLHL20
IGF2BP3
BCAS4
SFSWAP
BLCAP
PLEKHM3
TOP3B
UBE2O
DDX18
AANAT
MLX
ERCC1
ARHGDIA
COMMD7
KIAA1586
ARFGEF2
BUB1B
CWC25
TDG
ASIC3