ChIP-Atlas: Target genes

Potential target genes for HDAC2

Query protein: HDAC2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10616096 | GM12878
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC2's Target genes

◢ HDAC2: Average

◢ SRX16386913: 293

◢ SRX3010110: A549

◢ SRX3010111: A549

◢ SRX24188777: BJ

◢ SRX24188786: BJ

◢ SRX20550182: BT67

◢ SRX20550183: BT67

◢ SRX20550184: BT67

◢ SRX20599715: Caco-2

◢ SRX20599717: Caco-2

◢ SRX017704: CD4+ T cells

◢ SRX687555: Erythroid progenitors

◢ SRX1053939: ES cells

◢ SRX1053948: ES cells

◢ SRX1053951: ES cells

◢ SRX1053958: ES cells

◢ SRX1053973: ES cells

◢ SRX1053977: ES cells

◣ SRX10616096: GM12878

◢ SRX10616097: GM12878

◢ SRX11374678: GM12878

◢ SRX11374679: GM12878

◢ SRX3322296: GM12878

◢ SRX3322297: GM12878

◢ SRX4909431: HCC3153

◢ SRX4909432: HCC3153

◢ SRX100538: Hep G2

◢ SRX10478224: Hep G2

◢ SRX10478225: Hep G2

◢ SRX2423815: Hep G2

◢ SRX2423816: Hep G2

◢ SRX100390: hESC H1

◢ SRX116457: hESC H1

◢ SRX186668: hESC H1

◢ SRX3694983: HL-60

◢ SRX3694988: HL-60

◢ SRX2023732: iPSC derived cardiac cells

◢ SRX2023764: iPSC derived cardiac cells

◢ SRX1053919: iPS cells

◢ SRX1053924: iPS cells

◢ SRX1053929: iPS cells

◢ SRX1053934: iPS cells

◢ SRX1053963: iPS cells

◢ SRX1053968: iPS cells

◢ SRX1053981: iPS cells

◢ SRX1053986: iPS cells

◢ SRX1053991: iPS cells

◢ SRX1053996: iPS cells

◢ SRX1054001: iPS cells

◢ SRX1054006: iPS cells

◢ SRX100516: K-562

◢ SRX116423: K-562

◢ SRX116424: K-562

◢ SRX186643: K-562

◢ SRX2423402: K-562

◢ SRX2423403: K-562

◢ SRX5457481: K-562

◢ SRX5457482: K-562

◢ SRX7135363: K-562

◢ SRX1514286: Kasumi-1

◢ SRX8064823: Lymphoblastoid cell line

◢ SRX8064824: Lymphoblastoid cell line

◢ SRX190281: MCF-7

◢ SRX2140211: MM.1S

◢ SRX11399800: NCI-H1963

◢ SRX11399801: NCI-H1963

◢ SRX11399802: NCI-H1963

◢ SRX9779520: NCI-H1963

◢ SRX4732741: Pre-B cells

◢ SRX7981741: Prostate cancer

◢ SRX7981742: Prostate cancer

◢ SRX7981743: Prostate cancer

◢ SRX7981744: Prostate cancer

◢ SRX4313202: RH-4

◢ SRX4313219: RH-4

◢ SRX4313220: RH-4

◢ SRX9562892: RH-4

◢ SRX9562897: RH-4

◢ SRX19212560: SK-N-MC

◢ SRX7643943: U-87 MG

◢ SRX059711: VCaP

◢ SRX059712: VCaP

◢ HDAC2: STRING

HSPA6
H2BC17
H2AC17
OR2B2
GSTA4
UBC
DUX4
CCDC107
ARHGEF39
SIT1
PARP16
RAB11A
KNL1
PCGF2
MTRNR2L1
NPR1
ILF2
BRMS1
B4GAT1
H4C8
METTL26
WFIKKN1
PLXDC1
NCOA7
MYNN
ACTRT3
TRIM7
PRMT5
MPZL1
FCGR3A
BORCS6
DNAJB4
BCAR3
SACM1L
ALOXE3
HES7
POLR3E
CCDC200
RNASE4
ANG
PSMA3
ACTB
LOC102724770
DGCR6
NDUFS7
TMEM259
CNN2
FBXO31
MAP1LC3B
SMARCC2
FRG2C
MED16
FCGR3B
CCDC115
IMP4
POLG
LASP1
FCHSD2
DCT
ELF1
WBP4
LUC7L2
FMC1-LUC7L2
FMC1
LTA4H
SHF
CRYAA2
CRYAA
ZNF839
OR1F1
ZNF184
LAMP1
OR6S1
TIA1
PCYOX1
MDM4
HMGN4
EAPP
C8orf37
TMEM107
VAMP2
WASF2
CLP1
ZDHHC5
MAMDC2
H2BC5
H1-4
H4C3
H1-6
PTPN6
C12orf57
ZBTB4
SLC35G6
POLR2A
RPL12
LRSAM1
ZBED9
POLDIP3
H4C13
H3C11
H2AC16
H1-5
RPS29
ZFP36
PLEKHG2
H1-2
NPAS4
HTR5A
MTRNR2L2
MSH3
DHFR
GSN
TDRD7
XKR7
RAB14
IQSEC3
MTRNR2L8
SPTAN1
NKX1-1
CPLX2
ZNF77
GBA
CAMTA1
SMIM17
LMLN2
LIN28A
NBPF1
ZNF555
IFT46
ARCN1
FRG2
CEBPE
INSM2
KIF5C
ARID3B
RIPPLY2
CYB5R4
ART1
UTP20
SSBP1
NUF2
FAM24A
GAS8
ZNF335
STAT1
POLR2J3
TMEM242
PAXBP1
SRA1
SLC35A4
APBB3
NME1-NME2
NME1
PRRC2B
KXD1
CRNKL1
CFAP61
RRP15
WASHC2C
NUP214
RBM48
PEX1
LPIN1
FANCD2
SERPIND1
VPS33A
PSMD9
HPD
RAB42
TMEM101
UTP25
TIPARP
NAGPA
HAGH
FAHD1
SPATA25
ZMPSTE24
KCTD18
HEXA
RNF187
RAB37
TRMT1
NACC1
NEURL2
CTSA
ATP6V0D1
AGRP
TTC26
MTFR2
AFAP1
POLR3H
AHCY
CDKN1A
STX16
KCNH7
TRIP4
PCLAF
QTRT1
CRBN
TMEM248
PPT1
YJU2
WASHC2A
WDR74
STX5
RBM19
SUMF1
HPCA
IBA57
RTBDN
MAST1
SPNS1
USP35
KCTD21
EXO1
OSCAR
NDUFA3
SEPTIN9
DLGAP3
EEF1AKMT3
SCFD2
WASHC5
NSMCE2
BARHL1
ZSWIM1
LAT
ZCCHC7
PDE6D
COPS7B
SNAP25
USP30
PPP1R35
ZEB1
TMCO2
POLM
RAD23A
CALR
TMEM262
DHDDS
NEK2
TTLL4
SLX1B
SLX1A
BOLA2B
BOLA2
EIF2D
RPS19
TATDN3
NSL1
ASMTL
NOS3
BHLHA15
SLC39A3
CELSR3
TMEM120A
P4HA1
TRMO
STX18
FARSA
CCDC106
ZNF23
SULT1A4
SULT1A3
UBFD1
EARS2
ZCWPW1
MEPCE
METTL1
CYP27B1
DBNL
PRR14
FBRS
U2AF2
TIGAR
BCL7B
SPDYE14
SPDYE10P
MARCHF4
CENPP
SMG8
NR1H2
VPS50
HEPACAM2
IDH3B
PWWP2A
PHRF1
CCNG2
KIF3B
ITGB3BP
EFCAB7
KAT5
BIRC5
FAM227B
DTWD1
TTC24
IQGAP3
TDRKH
RHEBL1
TM9SF1
IPO4
BNIP3L
PDE4A
GPR107
NAGS
ZNF581
ZNF580
RABL2B
RBBP5
SOD2
NOL8
SPATA2
RBM8A
DYNC2I1
PDXK
PYY
TPH2
DHRS3
UNG
ALKBH2
CHGB
UBE2H
RAP1GAP
TMCO3
DCUN1D2
RNASEH2C
GTPBP6
TIMM17A
LMOD1
HMGB1
MIS18A
CDK7
DNMT3B
LARP1
SPOP
EPHA10
RABGEF1
WDR4
RTTN
SEBOX
RABGAP1L
SARS1
SUPT7L
SLC4A1AP
SVOP
GATB
BOLA2-SMG1P6
RFC1
DCLRE1B
AP4B1
NFE2L2
ZC3H18
JUNB
NDUFS3
KBTBD4
RBM28
RDH5
PXN
PHC2
PSME3
BECN1
EIF1AD
CST6
BANF1
CDT1
NUP107
NEIL3
TRUB2
COQ4
TAF12
WTAP
APRT
MTF2
PPIL2
CASC3
COX6A1
SLC45A4
PRR5L
N6AMT1
MRM3
GLOD4
DHX40
DNAJC5
FAM228B
COMMD2
FAM180B
CCDC59
TSR3
GNPTG
POLR3F
DZANK1
HIBADH
UBE2L3
PCIF1
ITGA7
BLOC1S1
SLC12A9
THAP9
SHC1
SEC31A
MRPL48
COQ8A
PI16
KLHL18
KIF9
C6orf89
RFX1
SF3A3
H4C15
H4C14
H3C15
H3C14
CRYBG1
RAD51
RTN3
MAPK8IP2
MRPL27
EME1
WDR36
INTS12
GSTCD
COMMD9
ZFPL1
CDCA5
CDC14B
COMMD4
PDE1C
GTF3C3
EPN1
C2orf66
CNOT3
ATL3
CPPED1
ATG9B
KIAA0895
KNTC1
KYAT1
TEN1
ACOX1
CCDC77
HOOK2
FBXO5
FNBP1
KIF18B
NRL
NUDT15
L1CAM
CBLL1
TRIAP1
ITPRIPL1
PCNA
PAFAH2
CSTF1
AURKA
CDK5RAP1
DRG2
TP53I3
SF3B6
POLD1
TXLNA
USP2
MFSD1
GPATCH3
CADM3
CCNA2
OLFML2A
SLC25A51
NCAPH
MYBL2
BIRC2
RNF181
ASF1A
RIMBP3B
RTN4
TRIT1
ENPP3
C12orf66
CCDC88A
STAM2
TTC31
CCDC142
PSEN2
ZNF852
IL1R1
ALAD
RTF2
DUS3L
ABCB8
VIM
BAIAP2
COL23A1
H2AC19
H2AC18
OGDH
TSFM
EBAG9
FHL3
VTA1
NMBR
TOMM22
AP3S2
PFDN4
RRP12
VARS2
GTF2H4
ATF3
IPO11
DIMT1
BCAS3
NSUN4
LIMS1
SMYD5
HDAC2
LRRC59
POM121
USP54
AMZ2
TMEM199
POLDIP2
RGPD1
RGPD2
PEX3
ADAT2
YARS1
UBL5
S100PBP
PHF19
MRPL40
HIRA
COASY
CKS1B
ASF1B
FLAD1
TMBIM4
RIMBP3C
CRKL
USPL1
KDM3A
WBP1
SWSAP1
TBRG4
TRAPPC6A
BLOC1S3
KIF20A
BRD8
SPG21
EDC3
ATR
CAP1
SSNA1
ANAPC2
CCDC146
ID1
C16orf71
ANKS3
NOP16
HIGD2A
HNRNPF
STAT3
KMT2D
BHLHE40
MRPL45
GTF2H3
EIF2B1
ZNF764
OPA1
GPN2
HUS1
YTHDF2
UBE2Q1
CHRNB2
DCAF11
PGAM5
NOTCH2
UTP11
ATG14
KLHL20
IGF2BP3
BCAS4
SFSWAP
BLCAP
PLEKHM3
TOP3B
UBE2O
DDX18
AANAT
MLX
ERCC1
ARHGDIA
COMMD7
KIAA1586
TMEM230
ARFGEF2
BUB1B
CWC25
TDG
ASIC3
ZNF684
CCDC86
MED23
DPY19L4
CFAP54
ZCCHC14
NAGK
GOLGA7
CMSS1
TRMT6
MCM8
ADNP
P2RX6
SHOX2
HSD17B1
MYCL
POLR3B
CKS2
UBE3B
CORO1A
RGS3
CKAP2L
SECISBP2
KCNJ14
GRWD1
MRPL44
UNKL
SUPV3L1
BSDC1
PC
HNRNPD
KLHL32
C8orf33
CAND1
ESCO2
AP1M1
FBXL13
ARMC10
CDC25B
RGL1
NUP42
D2HGDH
VPS37D
MTIF2
ZC3HC1
CD19
GDAP1
NNAT
CHCHD1
CYRIB
DUSP1
CYB561D1
SASS6
MTBP
MRPL13
MAD2L2
E2F6
CLK3
NR6A1
MACC1
NUP35
TBC1D19
KIAA0895L
NBN
ELL
ACVR1
GNG14
AAR2
SAP30BP
RECQL5
GTF3C4
DDX31
LTV1
KIF2C
INTS7
DTL
SLC24A1
CACTIN
FAM72C
RINL
INKA2
THAP7
RABEP2
PDE4DIP
ARPC5
KLF2
NOXO1
ZBTB45
ATAD2
ADAMTS14
ESYT2
CFAP298-TCP10L
CFAP298
RAB5IF
NOL6
TUBA1C
PFDN6
CA4
SNRPE
NOL7
ITFG2
AVEN
LSM5
AVL9
FANCI
NFIB
PMVK
TMEM208
LRRC29
DPP9
LTN1
RAB33A
WDR70
NUP155
TEAD1
DHX37
BRI3BP
SGO1
INTS14
SCRT1
TIMM9
KIAA0586
DZIP3
CIP2A
RGL2
C5orf51
MRPS23
CEP135
ZGRF1
LARP7
UFD1
CDC45
TMEM186
PMM2
RCC1
STMN3
RTEL1
ERMAP
SKA3
MRPL57
PIKFYVE
TTC27
NMNAT1
LZIC
YIF1A
TMEM151A
PGBD5
EBNA1BP2
CFAP57
QTRT2
PPP1R11
POLR1H
CCDC191
PAF1
PTPN4
TFB2M
CNST
NAXE
SPIDR
EIF3F
PPWD1
MGAT5
GPATCH4
CENPK
PIGU
COX16
TMEM41A
POLR3D
SKA1
SVBP
CORO7-PAM16
CORO7
URB1
MINDY4
MRPS16
NAT10
PUS10
PEX13
NUP54
NEUROD4
RPTOR
PRCP
DDIAS
PTPRH
DNAJC25-GNG10
DNAJC25
KLF1
GCDH
DNASE2
RBM42
DGAT1
TACO1
ZNF830
PTPRF
CCT6B
ANK1
TRAPPC9
PBK
TOMM40
NOTCH2NLA
SMARCD2
FXN
MCM7
DNAJC6
AP4M1
PRMT2
PCYT1A
TEKT2
EZH1
ADPRS
MRPS35
GTPBP10
NDUFAF5
ESF1
UTP3
VPS9D1
CDC20
VPS26C
EXOSC5
BCKDHA
TPM4
POLR2G
IQSEC1
ABCB10
ZBTB6
RC3H2
RSRC1
EXOSC9
SNAP29
PI4KA
CENPS-CORT
CENPS
RBKS
BABAM2
XRCC2
UNC45B
NLE1
TSN
NUCKS1
WDR62
TMEM181
THAP8
PHOSPHO2
CCDC173
C12orf73
ARHGEF1
TFB1M
GLRA1
FAM98B
CNOT4
ZNF165
OR1F12
AURKB
PPAN-P2RY11
PPAN
MRPS15
TFPT
PRPF31
POC5
TBC1D30
E2F1
CCNL1
FAM161A
DNAJC9
RCL1
ZC3H15
RNF217
FAM133B
INO80B
LRRC37A3
HIP1
PUM3
WDR46
SETD4
CUL5
POLN
HAUS3
SPRED2
AGBL3
SIRT4
CDC73
CBR1
POLE3
PKDCC
C9orf43
ATP5F1E
C6orf47
APOM
ZNF778
MIS18BP1
SMN2
SMN1
MRI1
LRP2BP
HEATR1
GET3
RIPOR3
ODF3L2
PMS2
AIMP2
RPL23A
NCLN
LSM12
G6PC3
VPS72
PIP5K1A
GPR182
TNFRSF1A
CBWD5
RHCE
TAF13
TEFM
ADHFE1
POLR2J
RNF166
CTU2
PIN1
DSCC1
SLC39A7
RXRB
ACOX3
MRPL21
IGHMBP2
ULK4
ANLN
TSEN54
PPP6R1
C2orf42
GSC2
TMEM94
ZNF558
IREB2
ZHX2
TTC21B
YPEL4
INTS5
GANAB
H4C12
ARMH3
GTF3C5
ANGPTL6
TBP
PSMB1
SMIM12
HDAC11
SNX16
PNO1
TYMS
CCNB1
LZTR1
ING3
SPAAR
HRCT1
SFI1
RRM2
EIF4ENIF1
MRPS33
PAK1IP1
C6orf52
PGLYRP4
ECSIT
ZNF358
RRS1
RNF10
SELENOH
TIGD1
EIF4E2
ZP3
ST6GAL1
OBSL1
NXPH3
MMAA
ELOVL1
DOK3
DDX41
TBC1D14
ACVR2A
ZSCAN22
CD79A
PARL
CHSY1
PRKAG2
SYNJ1
SLC27A1
SPDYE7P
NDUFAF1
CASKIN2
TYMSOS
FBXW8
RPAP3
MRPL10
LRRC46
RAPGEF6
GATAD2A
SEC13
PDE11A
BNIP1
CENPF
RANGAP1
TFIP11
TCF4
TRMT5
SLC38A6
RAB34