ChIP-Atlas: Target genes

Potential target genes for HDAC2

Query protein: HDAC2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9779520 | NCI-H1963
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC2's Target genes

◢ HDAC2: Average

◢ SRX16386913: 293

◢ SRX3010110: A549

◢ SRX3010111: A549

◢ SRX24188777: BJ

◢ SRX24188786: BJ

◢ SRX20550182: BT67

◢ SRX20550183: BT67

◢ SRX20550184: BT67

◢ SRX20599715: Caco-2

◢ SRX20599717: Caco-2

◢ SRX017704: CD4+ T cells

◢ SRX687555: Erythroid progenitors

◢ SRX1053939: ES cells

◢ SRX1053948: ES cells

◢ SRX1053951: ES cells

◢ SRX1053958: ES cells

◢ SRX1053973: ES cells

◢ SRX1053977: ES cells

◢ SRX10616096: GM12878

◢ SRX10616097: GM12878

◢ SRX11374678: GM12878

◢ SRX11374679: GM12878

◢ SRX3322296: GM12878

◢ SRX3322297: GM12878

◢ SRX4909431: HCC3153

◢ SRX4909432: HCC3153

◢ SRX100538: Hep G2

◢ SRX10478224: Hep G2

◢ SRX10478225: Hep G2

◢ SRX2423815: Hep G2

◢ SRX2423816: Hep G2

◢ SRX100390: hESC H1

◢ SRX116457: hESC H1

◢ SRX186668: hESC H1

◢ SRX3694983: HL-60

◢ SRX3694988: HL-60

◢ SRX2023732: iPSC derived cardiac cells

◢ SRX2023764: iPSC derived cardiac cells

◢ SRX1053919: iPS cells

◢ SRX1053924: iPS cells

◢ SRX1053929: iPS cells

◢ SRX1053934: iPS cells

◢ SRX1053963: iPS cells

◢ SRX1053968: iPS cells

◢ SRX1053981: iPS cells

◢ SRX1053986: iPS cells

◢ SRX1053991: iPS cells

◢ SRX1053996: iPS cells

◢ SRX1054001: iPS cells

◢ SRX1054006: iPS cells

◢ SRX100516: K-562

◢ SRX116423: K-562

◢ SRX116424: K-562

◢ SRX186643: K-562

◢ SRX2423402: K-562

◢ SRX2423403: K-562

◢ SRX5457481: K-562

◢ SRX5457482: K-562

◢ SRX7135363: K-562

◢ SRX1514286: Kasumi-1

◢ SRX8064823: Lymphoblastoid cell line

◢ SRX8064824: Lymphoblastoid cell line

◢ SRX190281: MCF-7

◢ SRX2140211: MM.1S

◢ SRX11399800: NCI-H1963

◢ SRX11399801: NCI-H1963

◢ SRX11399802: NCI-H1963

◣ SRX9779520: NCI-H1963

◢ SRX4732741: Pre-B cells

◢ SRX7981741: Prostate cancer

◢ SRX7981742: Prostate cancer

◢ SRX7981743: Prostate cancer

◢ SRX7981744: Prostate cancer

◢ SRX4313202: RH-4

◢ SRX4313219: RH-4

◢ SRX4313220: RH-4

◢ SRX9562892: RH-4

◢ SRX9562897: RH-4

◢ SRX19212560: SK-N-MC

◢ SRX7643943: U-87 MG

◢ SRX059711: VCaP

◢ SRX059712: VCaP

◢ HDAC2: STRING

MTRNR2L1
PPT1
ZMPSTE24
TMCO2
ZNF684
CAP1
MBIP
SKA1
PPIE
TRIT1
EXO5
UTP20
PRRC2B
RPH3A
RLF
ARHGEF2
RABL2B
MRPL45
HPCAL4
DUX4
TRMT1
NACC1
TTC24
IQGAP3
NT5C1A
CDK7
RPS29
PRKACB
MYCL
SHCBP1
SSH2
CRNKL1
CFAP61
RAD51
NEMF
PPM1K
MFSD2A
QTRT1
NUF2
CCBE1
FAM161A
PPBP
PF4
ATP8B1
GCNT2
MPP3
CD300LG
TRAPPC6A
BLOC1S3
DHX37
BRI3BP
POLR3D
CCDC102B
ITPRIPL1
NCAPH
UTP25
FRG2C
C12orf66
DIAPH3
SCOC
NOTCH2
BMP8B
WDR7
ATP6V0D1
AGRP
NBN
MOK
ADAT1
ZP4
PSME3
BECN1
PAX9
KCNJ14
GRWD1
RTTN
MTFR2
HSPA12A
ENO4
SPG21
SEMA3C
SPACA1
PMAIP1
LAMP1
TRMT61A
CKB
MAB21L2
RRP15
COX8C
C16orf71
ANKS3
HEATR1
NR2E1
NAXE
GPATCH4
BIRC5
DZIP3
CIP2A
WDR4
ZNF24
ATP2C2
AP1S1
NBPF1
TIMM21
FBXO15
SPATA25
NEURL2
CTSA
ZSWIM1
SLF2
ATP5F1A
CDC20
ELOVL1
CFAP299
CORO2A
BLM
TMX3
PUM3
EXO1
ACVR1
PHB2
RIOK3
FANCI
CDC16
ZCCHC7
SRCAP
LOC730183
FBXO5
FGF14
UFD1
CDC45
KIF23
URB1
RBKS
BABAM2
SCFD2
TCF4
KPNA2
CALML3
UNG
ALKBH2
ZGRF1
LARP7
LYPLAL1
LRRC53
KIF2C
SMYD5
PNO1
RTN4RL1
DPH1
COMMD6
UCHL3
UTP4
DERPC
CHTF8
METTL11B
SLX1B
SLX1A
BOLA2B
BOLA2
SULT1A4
SULT1A3
BOLA2-SMG1P6
TRABD2B
CEMIP
TMEM241
AURKB
TICRR
MOCS2
MIS18A
CDT1
APRT
DMAC1
LYPD6B
KATNAL2
LYRM4
FARS2
WWP2
NOB1
MAGI1
TTK
C4B_2
C4B
TNXB
C15orf39
AEN
SLC38A8
PLEKHD1
RBM19
FAM200B
GTF3C4
DDX31
RD3
IFNG
EDC3
FAM72C
SRGAP2B
FAM72D
CKAP2L
TRAPPC8
VPS4B
ST6GALNAC1
EEF1AKMT3
METTL1
CYP27B1
NOL6
TOM1
HDHD2
POU2F1
WDR26
ZNF77
NEK2
TTC27
CD46
TFB2M
CNST
CCT2
NPC1
SLC25A17
CFAP53
CCNA2
CENPS-CORT
CENPS
PRR3
GNL1
GNG14
FBXW9
GNA12
TAF13
MZT1
BORA
RPRD1A
PRLHR
NUDT2
KIF24
ARMC2
AIP
RBBP8
CKS2
SECISBP2
USP37
CNOT9
RNF125
VPS33A
CCNG2
RDH5
ITGA7
BLOC1S1
COMMD4
TMEM186
PMM2
TRAPPC2L
GALNS
FOXB1
RTN3
ATL3
NOTCH2NLA
LRRC49
THAP10
NKX2-1
CEP135
MRPL1
HEXA
DSEL
ZBED1
DHRSX
COL9A2
USP2
EPHX1
MYDGF
IKBKB
TAF4B
PPP1R3B
KIAA0895
ANLN
POLR2J2
CDH2
CORO1A
GBA
MRPS18B
ATAT1
FAAP24
CEP89
KAT5
RNASEH2C
PIK3C3
TIMELESS
MIP
NTPCR
MRM3
GLOD4
KIF22
AP1B1
MRPS33
MCM10
TBC1D4
WASHC5
NSMCE2
STAM2
CCDC86
RPS3A
DDX5
POLG2
PEX19
SLC35D1
PCCA
NTAQ1
CLSPN
STK36
RNF25
CYB5R1
ADIPOR1
ZNF558
MCRS1
TFAP2A
RETNLB
TIMM9
KIAA0586
TROAP
ZNF408
ARHGAP1
RIPPLY2
CYB5R4
E2F3
VPS41
SH3KBP1
BCAS3
FAM183A
PMS2
AIMP2
CCNB1
RNF138
CYP21A2
PMVK
WDR61
POLR1B
DPH2
ATP6V0B
B4GALT2
CRISPLD1
SUMO2
TMCO3
DCUN1D2
ADPGK
SLC39A6
LRATD2
G2E3
CDK18
TMEM262
ZFPL1
CDCA5
CLK3
RBL2
TOMM70
LNP1
H1-2
H3C3
NKX2-8
NAT10
SLC12A9
ZNF778
C16orf46
ADSL
HNRNPU
RFX5
MPP1
ESCO2
QTRT2
CCDC191
POLQ
VPS26B
NCAPD3
RFWD3
YOD1
PFKFB2
HUS1
SUGP2
ARMC6
PDP2
NME7
BLZF1
RMC1
RPS27L
INTS9
HMBOX1
TRIP4
PCLAF
DDX19A
METTL18
C1orf112
PTPRD
CYTH1
SPG7
FNIP2
SHC1
MRPL27
EME1
CKS1B
FLAD1
CLYBL
MAK16
SRGAP2
FAM72A
TBC1D16
CCDC40
HROB
NEDD4L
SLC25A6
ZAP70
MYO5B
PBK
SMC2
STK11IP
CXXC1
MBD1
C6orf89
NOC3L
WDR74
STX5
POLR2G
NOL10
TAF6L
PTPN4
VPS11
CENPH
DNAAF4
CDC25B
SRGAP2C
FAM72B
ING5
SFXN2
ARL3
KIAA0513
UPF3A
NCMAP
CLN5
KIF18B
HSPBP1
BRSK1
WDR3
GDAP2
PIBF1
DIS3
TDO2
RPTOR
DLGAP5
FAM161B
COQ6
RPUSD4
FAM118B
ZBTB37
TAF1A
PROS1
ARL13B
RAB7A
CCDC146
TFIP11
DHODH
PKD1L3
WDR18
ASPM
DAOA
USP35
KCTD21
TAF12
GLE1
VTI1B
DIRAS2
EBNA1BP2
CFAP57
CHRNA9
PSEN2
GGT6
PDE4B
MYBBP1A
CSNK2A3
MTRNR2L2
MSH3
DHFR
PSMD9
HPD
KIAA2026
ERCC5
IKBIP
APAF1
LEMD3
EFCAB6
DCUN1D1
DDHD1
NUP35
GPX4
POLR2E
PIF1
VLDLR
RNF187
PWP1
ZNF594
MYLK3
SPNS1
LAT
ZNF358
MCOLN1
SGO2
GEMIN6
KNL1
SF3A3
MRPS28
STAP2
MPND
ZNF598
HASPIN
NPW
PIPOX
CCDC39
F11R
SCRN3
CIR1
TXNL4B
DHX38
DRD4
TBC1D30
GNS
UQCRC2
ESPL1
RPL17-C18orf32
RPL17
C18orf32
COMMD5
MFSD1
FHL3
IPO11
DIMT1
UTP11
RCL1
CCDC32
RPUSD2
THADA
FKBP1A
KIF14
LHFPL1
RPP40
PACRGL
CMC2
CENPN
LACTB
CRYBG3
RFC1
RIOK1
CAGE1
PPIH
GTSE1
PPIB
RRP12
SASS6
POLN
HAUS3
PISD
PRPF38A
ORC1
GAR1
TTC23L
CALHM4
ARHGEF38
DHX40
CASP7
RDX
RASL11B
P3H3
GNB3
TM9SF1
IPO4
MTR
MRPL24
DDX11
TSSK4
CNDP2
ERCC3
IER3IP1
RGS8
ARID3B
TRUB2
COQ4
TXLNA
TMEM208
LRRC29
STYXL1
VAC14
DYRK1B
NOP9
DHRS1
TAF1C
ADAD2
DYRK3
ZNF396
PRCP
DDIAS
TEKT2
ADPRS
WDPCP
MDH1
SMG5
TMEM79
MND1
ISG20
SP4
USF1
TSTD1
MTURN
DHDDS
CHST12
LRRC73
SPCS1
GLT8D1
YIPF3
POLR1C
ZSCAN30
SRD5A1
KLHDC4
ACADM
THAP11
MCM5
SWSAP1
PIGU
ADHFE1
RRS1
TOP3A
SMCR8
LZTS2
TWNK
MRPL43
DGKB
TMEM132D
POP7
MELK
FLRT2
SMAD2
RNF166
CTU2
IREB2
PDE11A
TNFAIP8L2
SCNM1
LYSMD1
TMOD4
MAFK
NEMP1
ZNF202
TSACC
CCT3
COQ9
CIAPIN1
SPATA4
PDCD2L
SSUH2
SRA1
SLC35A4
APBB3
RANBP6
WDHD1
SOCS4
RPF2
TRAF5
GATB
CNPY3
NYAP1
TSC22D4
NPL
PDE8A
ANAPC7
ZEB2
MAP11
ING1
CARS2
GAL3ST4
AP2S1
LAMTOR4
BTBD8
CEP295
C21orf58
PCNT
TMEM9B
SSR2
SNRPA
C19orf54
EHMT1
LRRN3
GRAMD2A
PACSIN3
MDN1
CCNB2
CASP8AP2
ARFGAP2
UBE2C
RNH1
ENOX2
ZNF587
FAM98B
LMNA
CDIP1
TTF2
RNF40
CCDC189
INPP5K
BAZ1B
ATP6V0A1
MEX3A
FAM234B
MAPRE2
CRELD2
ALG12
NUP107
RAB36
RSPH14
MED20
BYSL
TMEM260
GALNT1
STAT1
TRMT6
MCM8
PFDN6
RGL2
WDR46
NIP7
COG8
PDF
SENP7
KXD1
DNMT3B
NSFL1C
PIK3CA
INO80
SOCS3
ST8SIA3
ACOX3
NOTCH2NLB
SLF1
KIAA0825
ABHD4
DAD1
TMEM234
EIF3I
ZSCAN29
TUBGCP4
DPP4
SLC14A1
TNNI3K
POLR2J3
WDR62
THAP8
FBXW8
PYCR3
GFUS
PRIM2
ABHD3
PPP1R14D
SCG5
GPATCH3
ATF3
GPN2
E2F6
XRN2
STOML2
PIGO
POLR2K
FBXO43
SV2A
MTMR11
SNX19
PARP9
DTX3L
SF3B4
PARD3
ZIC5
UBE2Q1
CHRNB2
VPS9D1
ACTR6
FCF1
AREL1
SLC25A10
TMED5
CCDC18
MRPL12
NCKAP5L
EXOSC5
BCKDHA
SERP1
EIF2A
RSPH3
SLC35F5
SLC7A6OS
PRMT7
NUDT1
MRM2
ZWILCH
SNAPC5
RPL4
SZT2
MED8
GINS3
MAD1L1
DOLPP1
MLN
ORC2
SMYD3
RCCD1
ACYP1
ZC2HC1C
PFDN2
NIT1
FAM189B
SCAMP3
CEP128
SDE2
KIZ
OLFM3
SOX21
LRP2BP
HSP90AB1
SLC35B2
ANKRD37
NFKBIE
C18orf21
SLC35A3
CFDP1
DENR
ARL2BP
GOLPH3L
PHLPP2
NAGPA
CENPP
GPR107
INO80C
CEP162
CDK5RAP3
NCAPH2
LMF2
GNL2
ZNF33A
MRM1
DHRS11
TPGS2
ICAM3
LSM1
BAG4
RAVER1
CHAC1
FBL
MBOAT2
OR2T34
NR1H2
POLD1
VPS35
GPN1
CCDC121
BRCA1
RTF1
TK1
EIF3D
AGBL4
TMEM178A
C6orf47
APOM
BAG6
VPS45
S100A13
S100A1
CHTOP
PPIL1
PCID2
CUL4A
SF3A1
CCDC157
TTC5
RASAL2
RIT1
IBA57
PRR5L
COMMD9
VPS72
PIP5K1A
COG2
PPP1R12B
TMEM250
PLK4
HEG1
SLC38A7
EIF2AK1
PYGO2
PBXIP1
LOC101928120
PTCD2
MRPS27
WDR5B
SPATA2
LTV1
PLS1
PTRHD1
CENPO
ZNF721
PIGG
DDX19B
AARS1
DYNLL1
MUL1
CEP126
ANGPTL5
SPATA33
TIGD4
ARFIP1
BCL7A
DNAH14
MVD
DPY19L4
ZCCHC14
ZNF473
VRK3
NUDT9
MTHFR
CLCN6
TTI1
RPRD1B
NOLC1
SMIM5
RBM7
C11orf71
DBF4B
NCAPG
EXOC1
HNRNPH2
NIF3L1
PPIL3
SPAG1
MOV10L1
OGDH
GTF2H3
EIF2B1
KLHL20
DUS2
DPEP2NB
DDX28
GINS1
ABCA3
CFAP206
LAP3
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
KLF1
GCDH
DNASE2
MRPS18C
HELQ
NASP
EXOSC3
POLD3
THAP5
DNAJB9
CYB5A
USP36
ZZEF1
CYB5D2
ASB8
PSMB4
NCOA7
NOM1
TTC39C
TIPRL
SRP54
SMC4
IFT80
CEP43
VPS8
C1orf127
ASH1L
ZNF701
FUBP3
FUZ
LMAN1
MED25
EPYC
NAGK
EIF2B3
MYO1G
RECQL
GOLT1B
RAB5B
DHX33
PMEL
URB2
TAF5L
CDK2
SPTY2D1
MCF2L
SNAP47
JMJD4
SLC25A44