ChIP-Atlas: Target genes

Potential target genes for HDAC2

Query protein: HDAC2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX116423 | K-562
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC2's Target genes

◢ HDAC2: Average

◢ SRX16386913: 293

◢ SRX3010110: A549

◢ SRX3010111: A549

◢ SRX24188777: BJ

◢ SRX24188786: BJ

◢ SRX20550182: BT67

◢ SRX20550183: BT67

◢ SRX20550184: BT67

◢ SRX20599715: Caco-2

◢ SRX20599717: Caco-2

◢ SRX017704: CD4+ T cells

◢ SRX687555: Erythroid progenitors

◢ SRX1053939: ES cells

◢ SRX1053948: ES cells

◢ SRX1053951: ES cells

◢ SRX1053958: ES cells

◢ SRX1053973: ES cells

◢ SRX1053977: ES cells

◢ SRX10616096: GM12878

◢ SRX10616097: GM12878

◢ SRX11374678: GM12878

◢ SRX11374679: GM12878

◢ SRX3322296: GM12878

◢ SRX3322297: GM12878

◢ SRX4909431: HCC3153

◢ SRX4909432: HCC3153

◢ SRX100538: Hep G2

◢ SRX10478224: Hep G2

◢ SRX10478225: Hep G2

◢ SRX2423815: Hep G2

◢ SRX2423816: Hep G2

◢ SRX100390: hESC H1

◢ SRX116457: hESC H1

◢ SRX186668: hESC H1

◢ SRX3694983: HL-60

◢ SRX3694988: HL-60

◢ SRX2023732: iPSC derived cardiac cells

◢ SRX2023764: iPSC derived cardiac cells

◢ SRX1053919: iPS cells

◢ SRX1053924: iPS cells

◢ SRX1053929: iPS cells

◢ SRX1053934: iPS cells

◢ SRX1053963: iPS cells

◢ SRX1053968: iPS cells

◢ SRX1053981: iPS cells

◢ SRX1053986: iPS cells

◢ SRX1053991: iPS cells

◢ SRX1053996: iPS cells

◢ SRX1054001: iPS cells

◢ SRX1054006: iPS cells

◢ SRX100516: K-562

◣ SRX116423: K-562

◢ SRX116424: K-562

◢ SRX186643: K-562

◢ SRX2423402: K-562

◢ SRX2423403: K-562

◢ SRX5457481: K-562

◢ SRX5457482: K-562

◢ SRX7135363: K-562

◢ SRX1514286: Kasumi-1

◢ SRX8064823: Lymphoblastoid cell line

◢ SRX8064824: Lymphoblastoid cell line

◢ SRX190281: MCF-7

◢ SRX2140211: MM.1S

◢ SRX11399800: NCI-H1963

◢ SRX11399801: NCI-H1963

◢ SRX11399802: NCI-H1963

◢ SRX9779520: NCI-H1963

◢ SRX4732741: Pre-B cells

◢ SRX7981741: Prostate cancer

◢ SRX7981742: Prostate cancer

◢ SRX7981743: Prostate cancer

◢ SRX7981744: Prostate cancer

◢ SRX4313202: RH-4

◢ SRX4313219: RH-4

◢ SRX4313220: RH-4

◢ SRX9562892: RH-4

◢ SRX9562897: RH-4

◢ SRX19212560: SK-N-MC

◢ SRX7643943: U-87 MG

◢ SRX059711: VCaP

◢ SRX059712: VCaP

◢ HDAC2: STRING

KIF5C
NPAS4
HTR5A
MTRNR2L2
MSH3
DHFR
LIN28A
DUX4
MTRNR2L8
LMLN2
CEBPE
NBPF1
IQSEC3
RBM48
PEX1
PPP1R35
ZCWPW1
MEPCE
EPN1
NKX1-1
FAM24A
INSM2
PTPRN2
MTRNR2L1
NUP214
TMEM101
NAGS
PYY
RIPPLY2
CYB5R4
XKR7
FRG2
NAGPA
ZCCHC7
PDE4A
SPOP
DIO1
NOS3
IBA57
RTBDN
MAST1
UBE2O
AANAT
NPPB
TJP3
EPHA10
UTP20
GET3
ZC3H18
GPATCH3
GPN2
XKR9
LACTB2
SMIM17
LCN8
LCN15
LCN6
CELSR3
KCNH7
SPNS1
LAT
EIF2D
LPIN1
PKD2L2
RNF187
PDE1C
GBA
ZNF335
TTC26
CPPED1
UBL5
PIN1
DPF1
CCNP
TTC9B
RBM19
SUMF1
ART1
DHX40
CA4
DLGAP3
SMG8
TMEM204
TMED1
NACAD
CRBN
HPCA
RTN3
ATL3
UTP25
RFC1
NCLN
S1PR4
SLC44A2
DOCK6
CACNG3
ADAMTS14
KLHL18
KIF9
RGPD1
RGPD2
DRD2
OSCAR
NDUFA3
TRMO
CELF6
PICK1
B3GNT3
RAP1GAP
SCG3
DPH2
ATP6V0B
TCIRG1
NDUFS8
FOXA3
SYMPK
DIABLO
UBE3B
CEACAM16
CRKL
KPNB1
NSUN5
TNNI3
DNAAF3
PRAME
ANK1
SETD1A
ORAI3
MICAL3
PPP1R7
PASK
CPLX2
RIPOR1
NUF2
P2RX6
EBI3
HEXA
GTPBP6
UBE2L3
ERCC1
PRG3
SYT11
GON4L
CAPN2
FHL3
UTP11
RAB36
RSPH14
TYMS
TYMSOS
LSR
STEAP1B
ZC3HC1
VPS50
HEPACAM2
CELF3
CDK5RAP3
SPTAN1
RXRA
PPM1F
NBPF3
UFD1
CDC45
IQSEC1
PAFAH2
UBE2H
HAGH
FAHD1
QTRT1
MAMDC2
DNAJC11
TKT
ZNF23
PTPRH
ZDHHC24
ACTN3
EVI5
MEGF9
GPR107
CHGB
FNBP1
SLC29A3
CAMTA1
TRMT1
NACC1
THAP7
RTL10
GNB1L
ZNF280D
N6AMT1
NRCAM
TIGAR
NFIC
EIF3H
PHRF1
AP3B2
BARHL1
RFX1
COL23A1
POLE4
TSPOAP1
RAB42
SLX1B
SLX1A
BOLA2B
BOLA2
SULT1A4
SULT1A3
BOLA2-SMG1P6
VPS37C
TIMM10
SMTNL1
NDST1
CCDC116
PRKCSH
CCDC151
TRIP4
PCLAF
ATG14
DNAJC18
RAB40B
SARS1
GADD45B
FCHO1
PDXK
CALB1
LCLAT1
COASY
SFSWAP
TOP3B
MLX
HSD17B1
SMARCD2
SOGA1
IDH3B
PAF1
TAS1R3
DVL1
MARCHF8
CDC42BPG
WASHC2C
CENPS-CORT
CENPS
SNRNP25
POLR3K
PDE4C
POLD3
ADGRB2
TSEN54
CASKIN2
LLGL2
GAS8
TMEM242
PRRT1
PPT2
COA7
DCANP1
TIFAB
EIF4EBP1
TASOR
BAIAP3
NRROS
CYP21A2
TTC7A
MCFD2
EXO1
VPS37D
RPS13
RARG
RPA2
KTI12
HSH2D
USP54
MRPL40
HIRA
PRR5L
COMMD9
CPNE9
C8orf33
UBN2
SPATA2
EGLN1
MOCS3
DPM1
AATF
KAT2B
QKI
XYLB
VWA7
CCDC69
GNB4
TK2
CKLF-CMTM1
CKLF
PI16
HMGN2
SYCP2
PPP1R3D
FAM217B
TLCD3B
C16orf92
MICALL2
EPC2
ALDH4A1
TNFAIP8L1
SCRT2
RCN3
FRG2C
GSN
TDRD7
RAB14
LOC102724770
DGCR6
CCDC200
ZNF77
ZNF555
IFT46
ARCN1
ARID3B
SSBP1
STAT1
POLR2J3
PAXBP1
SRA1
EAPP
SLC35A4
APBB3
NME1-NME2
NME1
PRRC2B
KXD1
NDUFS7
CRNKL1
CFAP61
RRP15
FANCD2
SERPIND1
VPS33A
PSMD9
HPD
CCDC107
ARHGEF39
TIPARP
SPATA25
ZMPSTE24
KCTD18
SIT1
RAB37
NEURL2
CTSA
ATP6V0D1
AGRP
MTFR2
AFAP1
POLR3H
AHCY
CDKN1A
STX16
LAMP1
TMEM248
PPT1
YJU2
WASHC2A
WDR74
STX5
POLG
USP35
KCTD21
SEPTIN9
EEF1AKMT3
SCFD2
WASHC5
NSMCE2
ZSWIM1
PDE6D
COPS7B
SNAP25
USP30
ZEB1
TMCO2
POLM
RAD23A
CALR
TMEM262
DHDDS
NEK2
TTLL4
RPS19
TATDN3
NSL1
ASMTL
BHLHA15
SLC39A3
TMEM120A
P4HA1
STX18
FARSA
CCDC106
CRYAA2
CRYAA
KNL1
UBFD1
EARS2
METTL1
CYP27B1
DBNL
PRR14
FBRS
U2AF2
BCL7B
SPDYE14
SPDYE10P
MARCHF4
CENPP
NR1H2
PWWP2A
CCNG2
KIF3B
ITGB3BP
EFCAB7
KAT5
BIRC5
FAM227B
DTWD1
TTC24
IQGAP3
GSTA4
TDRKH
RHEBL1
TM9SF1
IPO4
BNIP3L
ZNF581
ZNF580
RABL2B
RBBP5
SOD2
NOL8
RBM8A
DYNC2I1
TPH2
DHRS3
UNG
ALKBH2
TMCO3
DCUN1D2
RNASEH2C
UBC
TIMM17A
LMOD1
HMGB1
MIS18A
CDK7
DNMT3B
LARP1
RPS29
RABGEF1
WDR4
RTTN
SEBOX
RABGAP1L
SUPT7L
SLC4A1AP
SVOP
GATB
DCLRE1B
AP4B1
NFE2L2
JUNB
NDUFS3
KBTBD4
RBM28
RDH5
PXN
PHC2
PSME3
BECN1
EIF1AD
CST6
BANF1
CDT1
NUP107
NEIL3
TRUB2
COQ4
TAF12
WTAP
APRT
MTF2
PPIL2
CASC3
COX6A1
SLC45A4
MRM3
GLOD4
DNAJC5
FAM228B
COMMD2
FAM180B
CCDC59
TSR3
GNPTG
POLR3F
DZANK1
HIBADH
PCIF1
ITGA7
BLOC1S1
SLC12A9
THAP9
SHC1
SEC31A
MRPL48
COQ8A
C6orf89
BCAR3
SF3A3
H4C15
H4C14
H3C15
H3C14
CRYBG1
RAD51
MAPK8IP2
MRPL27
EME1
WDR36
INTS12
GSTCD
ZFPL1
CDCA5
CLP1
CDC14B
COMMD4
GTF3C3
C2orf66
CNOT3
ATG9B
KIAA0895
KNTC1
KYAT1
TEN1
ACOX1
CCDC77
HOOK2
FBXO5
LUC7L2
KIF18B
NRL
H4C8
NUDT15
L1CAM
CBLL1
TRIAP1
ITPRIPL1
PCNA
CSTF1
AURKA
CDK5RAP1
DRG2
TP53I3
SF3B6
POLD1
TXLNA
USP2
MFSD1
CADM3
CCNA2
OLFML2A
SLC25A51
NCAPH
MYBL2
BIRC2
RNF181
ASF1A
RIMBP3B
RTN4
TRIT1
ENPP3
C12orf66
CCDC88A
BRMS1
STAM2
TTC31
CCDC142
PSEN2
ZNF852
IL1R1
ALAD
RTF2
DUS3L
ABCB8
VIM
BAIAP2
CCDC115
IMP4
H2AC19
H2AC18
OGDH
TSFM
EBAG9
VTA1
NMBR
TOMM22
AP3S2
PFDN4
RRP12
VARS2
GTF2H4
ATF3
IPO11
DIMT1
BCAS3
NSUN4
LIMS1
SMYD5
HDAC2
LRRC59
POM121
AMZ2
TMEM199
POLDIP2
PEX3
ADAT2
YARS1
S100PBP
PHF19
CKS1B
ASF1B
FLAD1
TMBIM4
RIMBP3C
USPL1
MPZL1
KDM3A
WBP1
SWSAP1
TBRG4
TRAPPC6A
BLOC1S3
KIF20A
BRD8
SPG21
EDC3
ATR
CAP1
SSNA1
ANAPC2
CCDC146
ID1
C16orf71
ANKS3
NOP16
HIGD2A
HNRNPF
STAT3
KMT2D
BHLHE40
MRPL45
GTF2H3
EIF2B1
ZNF764
OPA1
HUS1
YTHDF2
UBE2Q1
CHRNB2
DCAF11
PGAM5
NOTCH2
KLHL20
IGF2BP3
BCAS4
BLCAP
PLEKHM3
DDX18
ARHGDIA
COMMD7
KIAA1586
TMEM230
ARFGEF2
BUB1B
CWC25
TDG
ASIC3
ZNF684
CCDC86
MED23
DPY19L4
CFAP54
ZCCHC14
NAGK
GOLGA7
CMSS1
TRMT6
MCM8
ADNP
SHOX2
POLR3E
MYCL
POLR3B
CKS2
CORO1A
RGS3
CKAP2L
SECISBP2
KCNJ14
GRWD1
MRPL44
UNKL
SUPV3L1
BSDC1
PC
HNRNPD
KLHL32
CAND1
ESCO2
C8orf37
AP1M1
FBXL13
ARMC10
CDC25B
TMEM259
RGL1
NUP42
D2HGDH
CNN2
MTIF2
CD19
GDAP1
NNAT
CHCHD1
MDM4
CYRIB
DUSP1
CYB561D1
SASS6
RAB11A
MTBP
MRPL13
MAD2L2
E2F6
CLK3
NR6A1
MACC1
NUP35
TBC1D19
KIAA0895L
NBN
ELL
ACVR1
GNG14
AAR2
SAP30BP
RECQL5
GTF3C4
DDX31
LTV1
KIF2C
INTS7
DTL
SLC24A1
CACTIN
FAM72C
RINL
INKA2
RABEP2
PDE4DIP
ARPC5
B4GAT1
KLF2
NOXO1
ZBTB45
ATAD2
ESYT2
CFAP298-TCP10L
CFAP298
RAB5IF
NOL6
TUBA1C
PFDN6
SNRPE
NOL7
ITFG2
AVEN
LSM5
AVL9
FANCI
NFIB
PMVK
TMEM208
LRRC29
DPP9
LTN1
RAB33A
WDR70
NUP155
TEAD1
DHX37
BRI3BP
SGO1
INTS14
SCRT1
TIMM9
KIAA0586
DZIP3
CIP2A
RGL2
C5orf51
MRPS23
CEP135
ZGRF1
LARP7
TMEM186
PMM2
RCC1
STMN3
RTEL1
ERMAP
SKA3
MRPL57
PIKFYVE
TTC27
NMNAT1
LZIC
YIF1A
TMEM151A
PGBD5
H2BC17
H2AC17
EBNA1BP2
CFAP57
QTRT2
PPP1R11
POLR1H
CCDC191
PTPN4
TFB2M
CNST
NAXE
MYNN
SPIDR
EIF3F
PPWD1
MGAT5
GPATCH4
CENPK
PIGU
COX16
TMEM41A
POLR3D
SKA1
SVBP
FMC1-LUC7L2
FMC1
CORO7-PAM16
CORO7
URB1
MINDY4
MRPS16
NAT10
PUS10
PEX13
NUP54
NEUROD4
RPTOR
PRCP
DDIAS
DNAJC25-GNG10
DNAJC25
KLF1
GCDH
DNASE2
RBM42
DGAT1
TACO1
ZNF830
PTPRF
CCT6B
TRAPPC9
PBK
TOMM40
NOTCH2NLA
FXN
MCM7
DNAJC6
AP4M1
PRMT2
PCYT1A
TEKT2
EZH1
ADPRS
MRPS35
GTPBP10
NDUFAF5
ESF1
UTP3
VPS9D1
CDC20
VPS26C
EXOSC5
BCKDHA
TPM4
POLR2G
ABCB10
ZBTB6
RC3H2
RSRC1
EXOSC9
SNAP29
PI4KA
RBKS
BABAM2
XRCC2
UNC45B
NLE1
TSN
NUCKS1
WDR62
TMEM181
THAP8
PHOSPHO2
CCDC173
C12orf73
ARHGEF1
TFB1M
GLRA1
FAM98B
CNOT4
ZNF165
OR1F12
AURKB
PPAN-P2RY11
PPAN
MRPS15
TFPT
PRPF31
POC5
NCOA7
TBC1D30
E2F1
CCNL1
FAM161A
DNAJC9
RCL1
ZC3H15
RNF217
FAM133B
INO80B
LRRC37A3
HIP1
PUM3
WDR46
SETD4
CUL5
POLN
HAUS3
SPRED2
AGBL3
SACM1L
SIRT4
CDC73
CBR1
POLE3
PKDCC
C9orf43
ATP5F1E
C6orf47
APOM
ZNF778
MIS18BP1
SMN2
SMN1
MRI1
LRP2BP
HEATR1
RIPOR3
ODF3L2
PMS2
AIMP2
RPL23A
LSM12
G6PC3
VPS72
PIP5K1A
GPR182
TNFRSF1A
CBWD5
RHCE
TAF13
TEFM
ADHFE1
POLR2J
RNF166
CTU2
DSCC1
SLC39A7
RXRB
ACOX3
MRPL21