ChIP-Atlas: Target genes

Potential target genes for SOX9

Query protein: SOX9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX11220467 | HT-29
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
SOX9's Target genes

◢ SOX9: Average

◢ SRX718108: hESC derived pancreatic cells

◢ SRX4065343: hESC derived retinal cells

◢ SRX4065344: hESC derived retinal cells

◢ SRX4065345: hESC derived retinal cells

◢ SRX4065346: hESC derived retinal cells

◢ SRX4065347: hESC derived retinal cells

◢ SRX4065348: hESC derived retinal cells

◣ SRX11220467: HT-29

◢ SRX11220468: HT-29

◢ SRX768290: HT-29

◢ SRX11416753: KARPAS-422

◢ SRX11856133: LNCAP

◢ SRX11856134: LNCAP

◢ SRX11856137: LNCAP

◢ SRX11856138: LNCAP

◢ SRX11856139: LNCAP

◢ SRX11856140: LNCAP

◢ SRX11856141: LNCAP

◢ SRX11856142: LNCAP

◢ SRX359919: LoVo

◢ SRX13867212: MCF-7

◢ SRX13867213: MCF-7

◢ SRX13867216: MCF-7

◢ SRX13867217: MCF-7

◢ SRX10175282: PANC-1

◢ SRX10175283: PANC-1

◢ SRX1510444: VCaP

◢ SOX9: STRING

TINAGL1
C2CD4D
NOXO1
CDYL
SH3KBP1
GPSM3
KLK6
PCDH1
SLC35A5
ATG3
PPDPF
LAMB3
SLC5A1
RBM7
C11orf71
ETNK1
MTF2
TP53BP2
KCNH8
SNAP29
PI4KA
FRMD5
PLEKHG4
UNKL
CFDP1
PDE8A
XRRA1
SPCS2
TMPRSS3
CYP2R1
SPTBN1
ADAP1
PSMD14
MTBP
MRPL13
ACSS1
THOC1
HECTD2
ECPAS
SEPTIN9
RB1
PELI1
PLPP2
RASEF
EFR3A
NWD1
RABGEF1
ZNF609
RAB33B
FOXA2
STXBP3
SLBP
H3C6
LEPROT
LEPR
ITGA6
ETV4
STK32C
LRRC27
PELATON
DENR
FMN1
ZNHIT1
PLOD3
NPL
ECHDC2
ANLN
ZFP36L2
PAQR4
OBP2B
LSR
FGFR4
ZNF862
ATAD2
POLG
ARHGEF38
OGA
GGNBP2
DNAJA4
TLE3
EFNA4
BICD2
SDHAF1
TTC30B
NFE2
SH3TC2
RTKN
TES
XKR8
ZNF572
TRIM47
USP3
CCDC12
ACAP2
NPNT
TMCC3
LDHA
CPSF4L
SUPT20H
MAN1A2
SDHC
PDP1
POR
SHOC2
BBIP1
MIA
SMC4
IFT80
MYH14
CLDN3
SETX
PLOD2
PTK2
CAVIN1
ETV6
ZFAND4
MAPK14
PAQR6
SMYD3
RNF169
TMEM168
FOXO1
AAR2
CCN2
TACSTD2
RCC2
SLC16A3
BTG1
DTNB
COA1
ZNF473
VRK3
DNAJC14
MET
ZBTB38
ZSCAN2
UTP23
NF2
FZD6
SPATA5L1
GATM
MVB12A
COBLL1
TYMP
LRATD2
CALR
TTC23L
PPIC
NCOA5
PPP6R1
TMEM209
IQCH
AAGAB
LIMCH1
FAM91A1
C17orf58
CAPS2
ABTB2
RRBP1
FAM227B
DTWD1
SLC35E2B
RTN4RL2
STXBP2
PIGBOS1
PIGB
LHPP
LIPG
CRY1
CDC42BPG
FNDC3A
DOCK9
SLC35B4
ABCD3
LMO7
SMARCD2
TATDN1
NDUFB9
NDUFB2
UGGT2
WDR93
PEX11A
TUBGCP5
BCL2L11
ATL3
FBLIM1
PFDN4
PIP4K2B
SLC44A1
GBA
OGT
USP15
PAIP2B
SBF2
FSIP1
MCIDAS
WDR61
CALM2
DBP
ALOX5
SLC35E2A
RHOBTB3
SPATA9
ZCCHC4
MRPS31
IKBIP
APAF1
KANSL3
PPP1R9B
PBX3
LZTS3
SHKBP1
FKBP5
RNF135
NCAPG
ARHGEF17
HSPA6
ASCL5
MEMO1
CCDC93
KMT5B
FOSL1
SRP14
BBS9
FAM228B
PFN4
DECR2
E2F6
KLLN
CCNI
ERCC6L2
RGS3
TBC1D30
THBS1
ARNTL
PSMD5
HILPDA
KCTD12
ZNF180
CHSY1
PRKAR2A
RPS29
LRR1
ZNF264
RPL26L1
NUP85
EFNA1
EIF1AD
BANF1
AMMECR1L
OTULINL
COMMD6
HGS
ARL16
FZD1
PTMA
NOL7
SLC4A8
GALNT6
IFT81
PRDX1
MITD1
GLCCI1
BTBD10
VRK2
MIA3
C17orf75
TMEM65
UROS
BCCIP
ARHGEF5
RPS19
PGBD2
DARS1
RPS11
HSCB
CHEK2
FCHSD2
RALGAPB
EEF1AKMT2
TESK2
RBM48
PEX1
ERCC5
HMGB1
CD2BP2
MSANTD4
RHBDD3
EWSR1
SSBP1
CDK12
USP47
BIVM
TAF15
ARID2
CLDN4
PPP1CB
CCNF
TTC30A
UFD1
CDC45
STUB1
CROT
TARS1
CEP152
JAG1
RABGAP1
PPP5D1
CALM3
PRR7
DNAJC27
FAM200B
RRAS2
EPOP
NOTCH2NLC
GPR180
USPL1
TRMT2A
RANBP1
TTC32
FNDC3B
COPG1
SFMBT1
PLEKHJ1
ABRAXAS1
CDKN2C
IFIT5
CDC42EP3
HNRNPA2B1
CBX3
TTC14
ELL2
CCNL1
NMI
USP48
MINDY2
CDADC1
AHCYL2
RBM34
AP3S2
PLS1
S100A2
PRCP
WASHC5
NSMCE2
DDIAS
PHF5A
ACO2
FGFBP3
SLC25A36
MYL12A
C21orf91
PLA2G7
PTDSS1
MTERF3
RUBCNL
INTS12
GSTCD
RCL1
RPL27A
C8orf76
USP1
DYNC2I1
LDHB
SKA3
MRPL57
AMACR
UBR7
GON7
PRB1
HNMT
MRPL40
HIRA
ZNF614
TXNDC9
EIF5B
HYLS1
SLC39A10
ZC3H8
RBCK1
VMP1
PTRH2
ARHGEF7
WDPCP
MDH1
MYH9
SCYL3
PHLPP1
LIN54
MAP3K11
FBXO47
TBC1D31
MTHFD2L
PCNP
CCS
CCDC87
DNAJC3
SLC2A13
RMND5A
RNF103-CHMP3
ZFAND3
PTPN13
PTPN4
PPIB
PGM2L1
ITGB3BP
EFCAB7
NREP
WDFY2
TMEM71
PHF20L1
LCN2
MRPS30
IQCC
IL1RN
ARID1A
POLR2G
PARK7
SORT1
NUP107
PPM1D
ZNF143
TIPIN
SECISBP2
BORCS6
MECR
PPL
EXOC6B
TRIM62
NOL11
IFRD1
ROPN1
UBE2I
ZNF195
SEPSECS
QTRT2
CCDC191
PRR19
PAFAH1B3
INO80C
ZBTB40
WDR27
C6orf120
RNF130
DPY19L3
DNAAF3
UCHL3
SYT7
MAFG
RIPK4
FGFR2
PLEKHA8
STARD4
SERTAD3
ASPH
RANBP9
NHLRC2
DCLRE1A
EED
UCHL5
RO60
RINT1
KMT2B
CCDC7
GDF5
CEP250
EHHADH
FKBP9
GORASP2
ZDHHC24
ACTN3
LSM8
TOE1
MUTYH
PYROXD1
GNB2
KRT8
KLHL7
MED4
FAHD2A
SETDB2
CAB39L
H4C12
PRKCI
SNX17
EIF2B4
GGCT
DSCC1
THADA
NANP
YTHDF3
LY75-CD302
LY75
DIAPH3
MRPL3
GRAMD2B
CARNMT1
LOC107984974
FAM83D
SPHK2
RPL18
STARD7
ZNF76
ASXL1
FRG1
GSK3B
SPACA9
AK8
EMSY
GALK2
COPS2
SELENOT
PDRG1
RTN3
VANGL2
PAPSS2
NFKB2
DPY19L4
CCDC130
CRYBG1
RPN2
MROH8
PPP1R13L
GALNT3
MAT2A
UBE2F
MED30
MRPS35
RAD21
KIAA0895
G2E3
TPD52
MAL2
NDFIP2
ACTR6
STX18
HEXIM2
KANSL2
ZHX1-C8orf76
ZHX1
HIKESHI
CD46
MOCS2
TMEM18
NUF2
GPR137
BAD
KMT2D
SECISBP2L
NFATC2
RC3H2
COQ9
CIAPIN1
CUEDC1
PIK3R3
PPP4R3B
ZNF497
PMS1
ORMDL1
CCNJL
WDR11
ARL14EP
CTNNB1
TTC26
ZBTB11
KDM3A
UBR2
TSEN15
PTPDC1
CEP126
ZC3HAV1L
SMIM11B
SMIM11A
RASGRF2
RUVBL1
CPEB3
LIG4
ABHD13
MARCHF5
SQSTM1
ARHGEF35
ZNF711
TTC39A
SATL1
PRKD3
DCBLD1
ANKRD13A
MRPL45
TRMT61B
ZNF777
TENT5A
ELMOD2
TMEM9B
B3GALNT2
DMBX1
ZNF780A
COL9A3
PTBP3
PRKDC
MCM4
GTF2H2
GTF2H2C_2
RBM28
ARHGAP27
SAP18
CBLB
TP53I3
ITGB1
GADD45A
TCF12
EXOSC10
ZNF226
PDF
VPS50
HEPACAM2
RNF19A
OTULIN
HES6
REEP6
PCSK4
UBE2T
GTF3C2
LSG1
COMMD2
CCNC
ZNF576
IRGQ
NDUFV2
YPEL5
RPS27A
CLHC1
ZCCHC9
ZNF518A
SNRPG
WRNIP1
ACOT2
MRPS24
PTOV1
CALU
SNRPB2
PPP1R8
FAM98A
RNF139
SCAF11
TIMMDC1
ZNF280D
MTREX
DHX29
SMARCA5
C1orf115
NAGK
TRNAU1AP
TUBG1
RETREG3
EIF3A
DISP1
WDR53
FBXO45
IREB2
NUFIP2
FAM3C
C19orf48
CLCF1
C18orf25
INTS6L
EIF2AK3
KRIT1
ANKIB1
GSDMD
RPS27L
TNFRSF11B
COLEC10
NSD2
RTL10
GNB1L
SHPRH
PGBD4
EMC7
CDON
VIRMA
ZC3H6
THAP5
DNAJB9
HSPE1-MOB4
HSPE1
HSPD1
GPR37
ARL2BP
TSPAN12
TBC1D17
AKT1S1
PTCD2
MRPS27
MRPL42
ERCC1
RRM1
C6orf89
SHROOM1
NBN
OTUD7B
RMDN2
TRMO
C9orf85
ABHD17B
DDX52
STXBP4
COX11
GPSM2
UBC
WDR36
CFAP20
HAGH
FAHD1
ZNF770
ITGB5
ICE2
CSTF3
KIF16B
BET1
TRPT1
NUDT22
ITGB8
SLC24A1
INTS14
GTF3C3
GLCE
ZNF451
MVK
COG7
CKAP2
TRAPPC2
OFD1
BICDL2
PDXDC1
FANCI
PRKAB2
CHD1L
METTL9
POC5
TMED2
MEF2A
KBTBD7
CCDC15
MAP3K13
STK4
SPAG5
ARSJ
ZMYM5
CEP63
ANAPC13
SUPT7L
SLC4A1AP
CHCHD3
MRPS33
EIF4A2
ZFC3H1
THAP2
GCLC
PARPBP
NUP37
UACA
ZZZ3
DDX6
SMCHD1
GTF2IRD2B
ADPGK
TNRC18
TUT1
LRRC58
NUDCD3
RPS6
PPFIBP1
WDR33
EID1
IQCB1
EAF2
BBS7
ZNF165
SUPT5H
JOSD2
RPS3A
DNAJC25-GNG10
DNAJC25
GPR160
TIMM10
NUP153
SMIM10L1
PRH1-TAS2R14
B2M
SLC52A2
FBXL6
NMD3
RGS2
BZW2
ANKMY2
SOX6
NAT10
SPAST
GSAP
HPS5
GTF2H1
FCHO2
PLEKHA1
C11orf58
HACD3
DPF2
HSPH1
NOP14
GRK4
RAB30
FAM98B
CDK8
NUP133
FOXJ3
PLAC8
VWA2
TPH1
ROPN1B
UQCRQ
GDF9
PDE4DIP
DMTF1
XPO1
PBLD
HNRNPH3
COG6
TFB2M
CNST
PTPN2
ARPC1B
BDH1
AJUBA
NFIB
ZPR1
NDUFB4
ZW10
MAD2L1
CDK17
SRI
CLTC
THEM4
RRP15
MTIF3
ACOT4
TIAL1
INKA2
C1orf74
GPAM
TTC37
ARSK
ZKSCAN2
ADAMTS7
STK35
CCT5
ATPSCKMT
ADNP
HEXA
COMMD9
ORC5
SRSF7
NCSTN
COPA
SPRED1
LIN7C
ARHGEF12
RUFY3
SERPINB1
TRIP4
GOT1
ESRP1
ZNRF2
DDX20
SMC5
CCNY
INTS13
FGFR1OP2
BCL2L12
BCR
RHPN2
IRF3
CENPE
NSA2
GFM2
COPS4
LNPEP
UGP2
PON2
MRPS14
ANKRD36C
CLN5
FUT4
POLDIP3
TBC1D23
SKAP2
GPN3
FAM216A
MMADHC
PACSIN3
TMEM87B
RPE
MDM1
ALG14
UBE2A
LSM5
LRRC6
ESCO1
SLC3A2
RPIA
ECT2
CCNG1
CD58
PSMA1
FBXO32
NRBF2
LIG3
ANKFY1
NIBAN1
IFT57
RPL22L1
TIPARP
NBPF1
TRMT1L
SWT1
MPZL2
GORAB
PGRMC2
RAP2A
FERMT1
SLX1B
SLX1A
BOLA2B
BOLA2
ATF7-NPFF
ATF7
ARHGEF19
PFKFB3
AP3S1
PLSCR1
CCNG2
TMEM185A
CDC25C
FAM53C
PKM
PPME1
C2CD3
RMI1
HNRNPK
GARS1
NDUFAF6
ZNF644
HMGCR
ZDHHC13
PAK1IP1
C6orf52
CTR9
FAM53A
SLC40A1
H3-3A
SELENOW
PPP1R12A
METTL26
FBXW11
LRP2BP
ANKRD37
TTPAL
MTX2
ZNF239
RBL2
DAB2
CENPN
ANKHD1-EIF4EBP3
ANKHD1
STAT3
MALSU1
NLE1
BLOC1S6
STYXL1
WDR35
PON3
HTR1D
PLK2
PPIL1
BLOC1S5
HOOK1
NPAT
ATM
SDCBP
MRPS23
PLEKHF2
CAPRIN2
PIK3R1
SQLE
HSD17B12
ZNFX1
PIGF
CRIPT
NTAQ1
TSG101
CLP1
TMEM106B