ChIP-Atlas: Target genes

Potential target genes for SOX9

Query protein: SOX9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX13867217 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
SOX9's Target genes

◢ SOX9: Average

◢ SRX718108: hESC derived pancreatic cells

◢ SRX4065343: hESC derived retinal cells

◢ SRX4065344: hESC derived retinal cells

◢ SRX4065345: hESC derived retinal cells

◢ SRX4065346: hESC derived retinal cells

◢ SRX4065347: hESC derived retinal cells

◢ SRX4065348: hESC derived retinal cells

◢ SRX11220467: HT-29

◢ SRX11220468: HT-29

◢ SRX768290: HT-29

◢ SRX11416753: KARPAS-422

◢ SRX11856133: LNCAP

◢ SRX11856134: LNCAP

◢ SRX11856137: LNCAP

◢ SRX11856138: LNCAP

◢ SRX11856139: LNCAP

◢ SRX11856140: LNCAP

◢ SRX11856141: LNCAP

◢ SRX11856142: LNCAP

◢ SRX359919: LoVo

◢ SRX13867212: MCF-7

◢ SRX13867213: MCF-7

◢ SRX13867216: MCF-7

◣ SRX13867217: MCF-7

◢ SRX10175282: PANC-1

◢ SRX10175283: PANC-1

◢ SRX1510444: VCaP

◢ SOX9: STRING

SMARCD2
FAM102A
DGLUCY
MYH14
CNP
FAM227B
DTWD1
WWOX
PPDPF
KANK1
PFDN4
PAQR4
SLC35B2
MTF2
RUBCNL
LAD1
TRIM37
POR
MBNL1
PSMD6
PRR7
PARD6B
B3GALT2
KMT5B
STX16
ZKSCAN1
RTKN
PPP2R2B
CDK2AP1
TMEM258
FEN1
BTBD3
C2CD4D
PRORP
PPP2R3C
GPSM3
BACE1
SPATA13
HR
NCOA3
IFT46
MTMR7
DHX36
NFE2
ATL1
DCLRE1B
AP4B1
ZCCHC4
EMSY
ZHX3
SYT1
LAMA4
ABCA5
DRAP1
C11orf68
COL9A1
CDYL
CTHRC1
CNIH1
PPP6R1
N4BP3
DPY19L4
CCDC130
STX18
ZNF180
PAPSS1
HEATR5A
CNPY2
TRIM2
HEXIM2
GAL3ST4
MYADM
SLC25A10
SART1
ARHGAP27
USP32
SMIM5
CAPS2
CIPC
ZNF609
AP4E1
MEF2C
KANSL3
PDXDC1
PLEKHG4
ZNF24
CSDE1
RMND5B
VMP1
PTRH2
KMT2A
SLC33A1
RNFT1
EPYC
PCDH9
HMGB1
USPL1
E2F6
WWP1
TRIM50
NWD1
PCDH1
EIF2D
SSBP1
MYO5C
SLC35E2A
EFNA4
SULF1
PLA2G7
PMP2
HDAC11
TRIM33
USP15
TMCC2
GAS7
NOXO1
SYT7
FAM217B
PPP1R3D
SLC11A2
SMC4
IFT80
CNOT6
PI16
HOXA3
SOX6
TMEM170A
PTP4A1
DGAT1
SORT1
SCAF8
DCSTAMP
THEM4
ETV4
H3C6
SEC14L2
WDR53
FBXO45
GTF2H4
EHF
LCE2A
STARD13
RBBP5
NME1-NME2
NME1
INTS12
GSTCD
RPL26L1
SUOX
KLHL32
CP
SLC44A1
FGFR4
KDSR
OGA
INPP4B
CHST11
ARL6IP1
MKRN2
ZNF787
PPIB
PDE4D
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
RSAD1
HSPA2
GRK5
CFAP20
PIK3R1
ANK3
YLPM1
CYTH1
NELFCD
VIRMA
ZNF277
DOCK4
CTNNB1
GBA
STRADA
DAAM1
EEF1A1
MRPL21
IGHMBP2
TPK1
SPATA2
USP8
MAP4K5
POC1B-GALNT4
COL9A2
NEDD4
FAM104A
C17orf80
LEPROT
LEPR
PPME1
C2CD3
ARF6
PLEC
RPS7
ITGB4
USP3
CGRRF1
TEX14
RAD51C
MRPL40
HIRA
HACL1
BTD
RPL27
TACO1
MYL12A
ARID2
DMXL2
MYL12B
HIPK1
RPL30
ATXN7
DNAJC14
BRIP1
MRPS18A
DSTYK
CORO2B
PREX1
VGLL4
LTBP1
AURKAIP1
SLAIN1
TRIM16L
GABPB1
DNAAF3
CTDSP2
BARHL1
HNRNPH1
FAT1
BCAS3
LIMCH1
KLF10
RAB17
PPM1D
EFCAB2
LCK
COMMD2
POLR2J3
PRKAB2
CHD1L
ARL8B
ADAT1
NOTCH2NLA
SRF
MAPK6
KIF21A
TRIM74
CPLX2
DECR1
PEMT
RHOJ
MED23
TBC1D31
ATP5MC2
GTPBP2
CLUAP1
OPA1
DRG2
THAP12
GVQW3
ZNF444
PRKCI
MRPS31
S100A13
BPTF
FAM207A
S100A1
SPAG1
WDR11
TIAL1
CEP85L
PRDX2
PRKDC
MCM4
SRRT
TADA1
MAFF
AMOTL1
ZC3H3
EFNA1
RTL9
CLTC
DKC1
LRRC37A3
MMACHC
CCDC163
CCAR1
SPTBN1
CDIPT
OTUD6B
ARHGAP19
SPRYD3
PELI1
SMG8
SLC39A6
HUS1
HERPUD2
HK2
GNB2
KRT8
RHOBTB3
NDUFAB1
WIZ
RBM4B
TEN1
ACOX1
PEX3
ADAT2
BRWD1
GTF2H2
GTF2H2C_2
FZD1
POLR3E
CCDC12
NSFL1C
EIF3E
RHOT2
UBE3C
DENND2C
DCUN1D1
MRPL44
RBBP8NL
VCPKMT
CCDC146
OAZ3
MRPL9
ITPK1
RMDN1
ETNK1
NOL11
COPS4
CLDN4
TBC1D30
CDK5RAP3
ATP10B
CBX1
GNS
CYB561
COBLL1
RHPN1
GSTA4
TNRC18
SLC35B1
CMTM5
CARM1
MAT2A
NOTCH2
BBS1
CYP19A1
LOC100421372
HSPA14
CDNF
SLC24A1
INTS14
NHP2
MAZ
ZNHIT1
PLOD3
SEPTIN9
MBNL2
EIF2S1
ATP6V1D
MTCH1
VEZT
FGD6
PDLIM7
ITGB1
TJP3
RMND1
ARMT1
RTBDN
CPPED1
PTDSS1
MTERF3
ANKRD39
EIF1AD
BANF1
MLEC
KCTD5
SRFBP1
TINAGL1
MRPS23
CHD6
CALCOCO1
FLYWCH1
ZNF56
MIA
GTPBP10
MALSU1
OSGIN2
RGR
FBXW7
SERPINA3
PPP5D1
CALM3
NDUFV1
ZNF595
MAPK1IP1L
DCP1A
LTA4H
SLC6A14
TPD52L1
RMND5A
RNF103-CHMP3
PDE4DIP
RBBP6
ATXN7L2
LEO1
GMFB
RIPK2
GLIPR1L2
PLEKHF2
DCAF10
WDR87
SIPA1L3
SGTA
CHAMP1
LYSMD2
DDX41
FKBP5
CDK13
RRM2B
MIDEAS
ZC3H15
ACTR10
RBM48
PEX1
PIK3C2B
PRSS54
YIPF2
TIMM29
OR2A1
CCN1
ATP5F1E
TMEM60
PHTF2
ZC3H6
SQLE
SND1
ADCK5
LRP12
APOD
ELAPOR2
GRHL2
SLC27A2
NEMF
TBX2
TOMM20L
ZFAND3
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
ZNF572
NREP
UBFD1
EARS2
TBXAS1
PNN
EEA1
BCAS4
TMUB2
PAMR1
AP3S2
METTL9
ARID1A
DHRS13
PHLDA1
PCBP2
EEF2K
PACSIN2
SNAPC3
CENPN
ADGRL1
EXD2
GOLGA5
HPS6
MINDY1
LRRC10B
NPAS4
SCRIB
ARHGAP18
ARPP19
WIPI1
HEBP2
CTDP1
ATP6V0C
ATAD2
FAM228B
GTF2H2C
SF3B6
NDUFAF6
ERICH6
RAF1
CCDC59
MRPS18C
HELQ
SAP30BP
RECQL5
TSPAN17
ANKRD36
VEPH1
MOCOS
UIMC1
DPP9
NBN
MEMO1
ZNF410
FBXO34
GDPD1
ASAP2
ZMYM5
EEF1AKNMT
ZNF764
EEPD1
RAB30
TBC1D19
POP7
AMZ2
ZCCHC8
PTGR2
HAPLN1
CFL1
TMEM150A
TMEM144
MBTPS1
B4GALT7
SNX17
EIF2B4
USP30
LMCD1
ARHGEF19
WWP2
YTHDC1
XRRA1
SPCS2
CROT
COX16
PCMTD1
SMAD5
GTPBP3
CDKN2D
RAPGEF4
WDR24
ANO8
IQCH
AAGAB
LSG1
UBC
ESRP1
MCMBP
SRSF1
DDX59
YOD1
PFKFB2
ITGA6
DENR
TEDC1
ARFGEF2
GAS2L3
AMN1
TOP1
PRELID3B
RPS29
SLC39A13
SAR1A
ATXN2L
KIAA0232
ATP5MPL
GFRA1
DUSP23
MROH1
GNB5
ATG16L2
PLPP2
NUP107
HBP1
CHCHD3
CCDC57
NFATC2
SELENOH
RWDD1
KIF22
FGFBP3
PON2
KMT2D
ZHX1-C8orf76
ZHX1
VAX1
SLC37A4
PKD1
AZIN1
SLC25A11
RNF167
GOT1
ADRM1
NOTCH2NLC
ADAM22
TNPO1
SF3B2
FUT1
APC
PRELP
NPIPB6
RTF2
SPHK2
RPL18
CYP51A1
RNF44
CDHR3
SLX4IP
FBXL19
TUBGCP3
STAG1
DNAH2
RBM25
MAP3K9
ERGIC1
CYP21A2
GPR22
TRIP4
MRPL45
B3GLCT
SLC25A40
DBF4
GHR
SNRNP70
IMPA2
CALB1
LARP1B
TFAP2C
KPNB1
DERL1
CCDC88A
TBC1D5
C10orf95
TMEM41A
CCNC
CPSF1
RABGAP1L
PROSER1
NHLRC3
FUT8
RIMS1
CNPY3
SLC25A25
NAIF1
TK1
DDX5
MAPK14
CLPB
KLHL12
ZNF148
RNF141
ZMYND8
SIKE1
LARGE2
MYO5A
ISOC1
ELL
RAB7B
MTBP
MRPL13
PRRC2B
ADPGK
TMCC3
INO80C
ACOT4
POLD1
PPP1R11
MRPL38
PRMT3
RPIA
RP9
HIP1
LRWD1
ALKBH4
LTO1
DNM1L
KNTC1
SLC2A12
SPPL2A
VANGL1
TOM1L1
ITGB3BP
EFCAB7
ADNP
NOP14
GRK4
GGCX
PHAX
BICD1
SYCP2
GAS8
MYSM1
LOC100289561
DBNDD1
NAA80
HYAL3
TMEM243
PDIA4
FRA10AC1
LNPEP
LATS2
INTS4
CSRNP2
ARNT
ZNF786
CCNG1
ZCCHC14
LHX9
TERF2IP
KARS1
KLK10
HTRA2
ATG7
ZFYVE26
PDE8A
DICER1
ZNF862
SH2B1
FAM3C
MEF2A
TMEM127
CIAO1
MAN2A2
NCBP3
NRAS
LUC7L
LCE1D
RFLNB
KIAA2012
FYN
PSMD5
VAPB
LARS2
PCCB
FAM13A
CA5B
SPATC1L
NDST2
STXBP3
CDK12
MTIF2
PPM1K
DSCC1
ADPRHL1
RPS16
RIPOR3
EXOSC4
TAOK2
RUNDC3B
RPN1
ARHGEF11
PPP2R2A
NUF2
RCBTB2
SPAST
DDX3X
USP20
C9orf78
IQSEC3
PPFIA2
KEAP1
ZNF18
ZFAND4
DDX1
MRPL16
POLR1F
RAG1
KMT2B
TNFRSF21
SCNM1
LYSMD1
KIAA1586
CNKSR3
WWC2
PSMF1
PSMD3
INTS2
CLP1
FAM214A
UBAP1L
H2AZ2
CRBN
OARD1
NFYA
BRIX1
DYNC1H1
MRNIP
SCG3
SPDYE14
SPDYE10P
SAYSD1
PLEKHG1
OXR1
CBX5
MRPL42
SEC22B
RTRAF
DCXR
SMG5
SLC9B1
AVPI1
PTK6
MTRES1
TRIM9
PPP1R3E
C2orf42
H2BC12
H2AC12
INTS1
NUFIP2
CSTF1
AURKA
CUEDC2
SCO1
ADPRM
RAB32
SLBP
ATR
DTD2
GOLGA3
SULF2
WWC1
FA2H
CPQ
HAX1
TOMM40
YJU2
GTF3C3
BNIP1
UBQLN4
LAMTOR2
LOC100287896
LIPT2
PCLO
SLC25A36
ZNF668
ZNF646
MTDH
CHMP7
TUBD1
TMEM52
RPS6KB1
NARF
TATDN1
NDUFB9
PKM
ZSCAN25
NOLC1
ASB6
PDSS2
FAM177A1
MKS1
SNRPD1
IL13RA1
SIX2
TRAF3IP2
PAX9
LMO3
GTF2IRD2B
LRATD2
FBXO33
ARHGEF5
LSM5
TIMM9
KIAA0586
VPS28
RELT
TMEM30B
MRPS7
GGA3
PLPPR1
CFAP410
GOLGA6B
SETDB2
CAB39L
PLOD2
PRPF18
TUFM
GPHN
ZNF706
PRKAB1
RAB5A
EFHB
LYPD1
RAD23B
FAM133B
TEFM
THAP5
DNAJB9
GSPT1
PHACTR3
WARS2
EGLN2
BCAR1
NDUFS7
ZSCAN2
PUS7L
IRAK4
TPBGL
VPS9D1
ZGPAT
ARFRP1
WDR59
VGF
PCTP
FLOT1
TSEN2
LRCH4
FBXO24
CLDN3
NUDT16
PA2G4
RMDN2
PPIA
SNAP47
JMJD4
ATP6V0A2
EMD
MPZL2
PPM1H
PTPN1
SMPD3
DHTKD1
SLC66A3
TMEM129
TACC3
GPR137
BAD
TPRN
PGC
GTF3C5
ZNF273
POC5
NR1H3
ACP2
TECPR1
PHKG2
TMOD3
RIOX1
ABL1
ZNF468
PRAMEF18
PSMB10
RBBP9
MINPP1
PRAMEF22
CFDP1
TRMT61B
SEC13
UCHL5
RO60
MRPL1
ZNF644
VWA8
RRN3
COQ8B
CUL7
IMMT
HS1BP3
STYX
RFESD
DTX2
NFKBIA
WDR38
PKNOX1
CEP63
ANAPC13
TIPARP
TDP2
ACOT13
RPS6KB2
FAM120B
RBSN
ASB2
RTP4
ABLIM2
KIAA0319L
PPP4R3B
ALG10B
PNPLA8
TSC1
GFI1B
ANGEL1
CHTOP
PIGM