ChIP-Atlas: Target genes

Potential target genes for SOX9

Query protein: SOX9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX13867216 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX9's Target genes

◢ SOX9: Average

◢ SRX718108: hESC derived pancreatic cells

◢ SRX4065343: hESC derived retinal cells

◢ SRX4065344: hESC derived retinal cells

◢ SRX4065345: hESC derived retinal cells

◢ SRX4065346: hESC derived retinal cells

◢ SRX4065347: hESC derived retinal cells

◢ SRX4065348: hESC derived retinal cells

◢ SRX11220467: HT-29

◢ SRX11220468: HT-29

◢ SRX768290: HT-29

◢ SRX11416753: KARPAS-422

◢ SRX11856133: LNCAP

◢ SRX11856134: LNCAP

◢ SRX11856137: LNCAP

◢ SRX11856138: LNCAP

◢ SRX11856139: LNCAP

◢ SRX11856140: LNCAP

◢ SRX11856141: LNCAP

◢ SRX11856142: LNCAP

◢ SRX359919: LoVo

◢ SRX13867212: MCF-7

◢ SRX13867213: MCF-7

◣ SRX13867216: MCF-7

◢ SRX13867217: MCF-7

◢ SRX10175282: PANC-1

◢ SRX10175283: PANC-1

◢ SRX1510444: VCaP

◢ SOX9: STRING

FAM102A
SMARCD2
MYH14
WWOX
LAD1
FAM227B
DTWD1
PPDPF
DGLUCY
CNP
KMT5B
KANK1
TRIM37
BACE1
MTF2
NCOA3
STX16
PAQR4
PI16
DPY19L4
IFT46
RUBCNL
PSMD6
GPSM3
B3GALT2
EPYC
CDYL
DHX36
MBNL1
ZKSCAN1
SLC25A10
C2CD4D
H3C6
ZNF24
CDK2AP1
PAPSS1
SLC33A1
PPP2R2B
PPP6R1
HR
EIF2D
MRPS18A
SLC35B2
PLEKHG4
PARD6B
SPATA13
NFE2
HOXA3
MTMR7
RTKN
DYNC1H1
POLR3E
DCLRE1B
AP4B1
ZCCHC4
KANSL3
PRR7
HMGB1
USPL1
ATL1
HDAC11
PFDN4
NOXO1
SEC14L2
ZNF180
MYADM
GBA
PRORP
PPP2R3C
USP32
CTHRC1
GAS7
USP8
E2F6
EHF
TMEM258
FEN1
CNPY2
SYT1
GAL3ST4
RIPOR3
CNIH1
PRKAB2
CHD1L
PALB2
DCTN5
MAPK1IP1L
SCAF8
COL9A1
PMP2
ADGRL1
EMSY
ADAM22
STARD13
N4BP3
GABPB1
CLTC
PLA2G7
LRRC37A3
EIF1AD
BANF1
HEATR5A
THEM4
OTUD6B
RTL9
HIPK1
ZNHIT1
PLOD3
HEXIM2
BRIP1
TMEM170A
CYP19A1
TRIM50
DNAJC14
ARF6
EFNA4
SRGAP1
PDE8A
MRPS23
INO80C
ZNF787
RNFT1
EIF3E
AP4E1
DCSTAMP
DSTYK
HSPA2
GRK5
INTS12
GSTCD
RGR
ITPK1
ZNF609
TADA1
ARHGAP19
CCDC130
YLPM1
RTBDN
STRADA
NUP107
BTBD3
ZHX3
PDXDC1
S100A13
S100A1
SMC4
IFT80
SOX6
LRP12
GAPDH
CAPS2
PPM1D
ARHGAP18
ARID2
BCAS4
ATP6V0A2
POR
PEX3
ADAT2
VAX1
SULF1
EFCAB2
SART1
CORO2B
VMP1
PTRH2
MAFF
MCM7
AP4M1
KMT2A
RPL26L1
CSDE1
MIDEAS
OPA1
SYT7
PDE4DIP
CYTH1
SORT1
SLC11A2
NWD1
COX16
PPME1
C2CD3
KLHL32
RAB17
PRSS54
TINAGL1
SPTBN1
FGD4
PLPP2
DAAM1
APPBP2
MRPS31
CEP85L
DNAAF3
PCDH9
SMIM5
AMOTL1
RPL27
METTL9
PRELID3A
MAN2A2
INPP4B
POC1B-GALNT4
MAP4K5
MKRN2
PIK3R1
ANKRD39
RSAD1
SF3B2
NEDD4
MEF2C
GEMIN7
USP3
FGFR4
ADRM1
RHCE
FZD1
TMEM41A
PTP4A1
FUT10
B4GALT7
ZSCAN32
ZNF174
SRF
MYO5C
PRPF18
TRIM74
DICER1
PKM
CRBN
VEPH1
ERN1
NPAS4
DECR1
LAMA4
COL9A2
GTPBP2
PCDH1
NSA2
GFM2
PCMTD1
PLEC
APOD
GFRA1
SQLE
FAM104A
C17orf80
RMND5B
USP15
DRAP1
C11orf68
PACSIN2
KDSR
DDR1
SLC39A13
TNRC18
KIF21A
CFDP1
ELAPOR2
USP30
DRG2
SLC39A6
DTX3
MRPL21
IGHMBP2
TRIM2
TRIB1
PTGR2
SLC2A12
UCHL5
RO60
STRBP
OSGIN2
BCAS3
CTNNB1
CGRRF1
H2BC12
H2AC12
NSFL1C
AMZ2
TMPRSS7
SERPINA3
RAPGEF4
KIF22
KRT8
MIA
VCPKMT
CP
TES
MRPL44
STX18
PYGL
TRIM33
PWP2
LOC102724159
LEPROT
LEPR
LMCD1
NOTCH2NLC
ACOT4
NDUFAF6
RBBP5
CHD6
PLOD2
NELFCD
HAPLN1
SLC25A25
NAIF1
TACO1
RPL30
NOL11
PLEKHF2
SDK1
GTF2IRD2B
SLC44A1
ANK3
SPATA2
GNB2
BCAP29
ATP10B
PHACTR3
PLAC8
MAT2A
WDR11
PIK3C2B
CNOT6
CDK12
MRPL42
CPPED1
ITGB3BP
EFCAB7
ADNP
RP9
RBBP8NL
AURKAIP1
SRRT
CCDC88A
CLUAP1
IQSEC3
ARL14EP
MBNL2
CSTF1
AURKA
FAM214A
RAB5B
TUBG1
RETREG3
ZNF697
LOC100421372
HSPA14
CDNF
CA2
EFNA1
ANKRD36C
GMFB
SGTA
HTRA2
CEP120
PHAX
MNX1
RHOT2
ARL6IP1
ESRP1
DDX3X
UBE3C
LEO1
RGS9
VGLL4
CMTM5
SRI
SAR1A
TBC1D31
LIMCH1
HSPH1
RIPK2
DMXL2
EEF1A1
TBC1D5
FAM177A1
SLC6A14
CCDC12
HACL1
BTD
PEMT
ETNK1
MRPL40
HIRA
CDK5RAP3
RCBTB2
ERGIC1
TSC1
GFI1B
ZNF280D
SMG1
SASH1
CPLX2
CRKL
MAN1A2
TUBGCP3
FAT1
TMEM150A
LARGE2
EXOC5
AP5M1
UBE2I
FAM86B1
SLC25A21
CBX1
STX6
FUT8
PLPPR1
GBP1
ITGA6
ARHGAP27
RINT1
PSMG3
VIRMA
IREB2
IPO4
THOC3
ZNF48
BRWD1
PRRT1B
ATAD2
SUPT7L
SLC4A1AP
TSEN54
CASKIN2
GGCX
MOCOS
UBC
DMTF1
SLC25A40
DBF4
FAM160A2
SCG3
MAN2C1
CCNC
PROSER1
NHLRC3
SCRG1
FAM217B
NBN
PPP1R3D
LTBP1
CCDC57
SLC27A2
MED23
TMEM60
PHTF2
DDX41
CDIN1
TDP2
ACOT13
TUT7
RMND5A
RNF103-CHMP3
KLF10
FUT1
NOTCH2
NOXA1
TRIM9
UNKL
HUS1
PGC
GOLGA5
AMN1
PCBD2
SEPTIN9
TMEM242
PA2G4
ABCA5
NOTCH2NLA
FAM120B
SNAPC3
NEMF
DHRS7
SSBP1
ZC3H6
FKBP9
SRRM3
TAOK2
RHOJ
ARHGEF37
METTL26
RABGGTA
GRAMD2B
CFAP410
CERS5
RPS7
WWP2
SP6
CARM1
EIF2AK3
RHPN1
APC
ATXN2L
FAM136A
STK32C
LRRC27
CYP51A1
TEFM
CCT2
NPTXR
TBXAS1
SLC25A32
DCAF13
DHRS13
NHP2
TEX14
RAD51C
RBM4B
TMEM44
DDX42
CCDC47
DPH7
MYO5A
FYN
PNPLA8
TMEM68
TGS1
CD58
TPD52L1
GABRP
TNIP2
RPS29
ZNF277
DOCK4
LRR1
GSK3A
LCK
DCAF8
CYP21A2
SPPL2A
MTAP
RAB30
NUFIP2
MRPS14
KDF1
U2SURP
TJP3
THAP12
GVQW3
INTS10
WDR24
GALC
RBM23
NDUFS7
TPK1
ARHGEF19
FRG1
E4F1
ADCK5
ZNF56
ZNF706
MAP3K3
SIKE1
TENT5C
JOSD2
RRM2B
KBTBD7
ISOC1
STAU2
PRRC2B
LSG1
DPP3
CAPRIN2
NUP155
PCBP2
MEN1
SMPD3
SAPCD2
FAM228B
SF3B6
POFUT1
PLAGL2
CSRNP2
RFC2
LUC7L3
PRKAB1
VGF
IFT88
CLDN4
FAM207A
EIF4B
RELT
SLC25A13
RMDN1
SPDYE14
SPDYE10P
NUDT4B
SPRYD3
RTF2
CLPB
ARFGEF2
BMS1
CBLL1
PUF60
PTK6
GPT2
PLXNB3
CELF2
OSBPL2
ARHGEF38
SLC24A1
INTS14
ATP5MC2
BPTF
NUDCD1
PAXBP1
YWHAZ
PIGM
TMUB2
NUF2
MALSU1
MAPK6
UGDH
SLC37A4
XPC
LSM3
PKD1
LHX9
NIN
TMEM222
POLR1F
CCNJ
EEF2K
CDKN2D
SRC
GAS8
ANKRD46
SLAIN1
C7orf26
OR2A1
DBNDD1
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
RTRAF
GFPT1
ATXN7
RIOX1
PDCL
SRGAP3
GPR137
BAD
RWDD1
STAT3
BBS9
PSMD8
PPIP5K2
GIN1
CALCOCO1
PARP4
BICD1
NCBP2AS2
NCBP2
AVPI1
GMPS
SAR1B
EIF4H
DGAT1
MYSM1
HEBP2
FA2H
PELI1
OBP2B
MAFG
UBE2J1
GNB5
MAF1
STXBP3
RBM28
TIPARP
WIZ
VAPB
EEPD1
CALM1
PHTF1
POLA1
SMG8
C19orf48
ZER1
PPP2R5E
ZC3H15
ZNF524
FIZ1
TM9SF1
POLR2J3
NREP
B3GLCT
UBQLN4
LAMTOR2
MDM4
ZNF286A
LCE1D
ASB2
RANBP3L
ZNF521
NME1-NME2
NME1
PRMT3
DNMT3A
GRAP2
DYNLRB2
LRATD2
DDX1
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
TPD52L2
POP7
INTS4
RNF44
HECTD1
ITGB1BP1
CPSF3
SNAP29
PI4KA
TESK2
RPL37
ZMPSTE24
EEF1AKNMT
LRRC59
TBC1D13
NFATC2
TOP1
PRELP
ELL
NFASC
ARID1A
HNRNPR
HNRNPA0
OAZ3
MRPL9
NUDT3
TIMM9
KIAA0586
TRIM16L
DEF8
LRIF1
ATP6V0C
TRIP4
GTF2H2
ADPGK
PDIA4
GTF2H2C
ANGEL1
ZNF606
SLC35E2A
HECTD2
PSMF1
CPSF1
RNF19A
ZNF148
CLTB
MAP3K9
SPECC1
SLC66A3
IQCH
AAGAB
TK1
TNPO1
BANP
KIAA0232
ASXL2
U2AF2
SH2B1
TUFM
WWP1
GHR
SYBU
ATP5F1E
INTS5
SCAF11
ARIH1
GXYLT1
TSPAN10
NPLOC4
ACTR10
FOXA1
BCKDK
HGS
ARL16
EXD2
CAND1
PHLDA1
EIF4A2
SULF2
CYB561
RPS12
ZNF318
ZNF407
KIAA0319L
GTF2H2C_2
SNX17
EIF2B4
FGFBP3
PTPN1
LCE2A
LYSMD2
TMOD2
MTMR11
SPART
TOMM40
COBLL1
CDC73
NDUFC2-KCTD14
NDUFC2
SYCP2
RBM25
LTO1
GSAP
PREX1
IMPA2
PLEKHG1
CCDC180
ZFAND4
KMT2B
PPP1CB
IST1
DCXR
ZC3H7A
CMTR1
L2HGDH
DMAC2L
CCPG1
C15orf65
ZNF440
ABCD4
RPS19
ZNF212
RPS20
PLEKHM3
SEC22B
VAMP4
ARPP19
TSSC4
HSPE1-MOB4
HSPE1
HSPD1
SMAD5
CAPN5
RFLNB
ZNF548
SAP30
SAMD8
DNAL1
FOXP1
CLEC16A
PRKDC
MCM4
CACUL1
NAA80
HYAL3
PCTP
RCOR1
TP53BP2
TLE3
FRA10AC1
MCIDAS
COG3
USP35
KCTD21
LOX
ATF7-NPFF
ATF7
CIPC
RABGAP1L
FIS1
BTBD1
IL13RA1
SETD1A
UPF3B
FMN1
ARHGEF5
PTMA
ZNF497
ATXN7L2
KRR1
ASB6
ANTKMT
KNTC1
LOC100289561
C16orf71
ANKS3
VPS4B
CFAP69
TM4SF1
CAPN15
DMRT2
NUAK2
MYCL
LGALS14
CCDC59
SERPINI1
PDCD10
ZSCAN2
DHODH
PHIP
TRPM7
KLF13
TMC7
ANO3
BTRC
FAM13C
CEP41
HES3
SUGCT
MPLKIP
PIGBOS1
PIGB
MEF2A
STAG1
HMGN3
AP3B1
LATS2
ZNF408
ARHGAP1
UBR7
GON7
DTD2
FBXO34
MAML1
VANGL1
SPATC1L
FBXL19
RPS16
HNRNPH1
MAZ
SOS1
NMNAT1
LZIC
INSM2
GTPBP10
OARD1
NFYA
LNPEP
DNAJC5
DDX5
RALGAPA1
PPP5D1
CALM3
BICD2
COPS4
PLS1
GTF2H4
TTC4
HERPUD2
ARMH3
ARL8B
TIMM23
NCBP3
DEPDC1B
TMED4
MTRES1
C1GALT1C1
ZNF624
TRIQK
UBE2Q1
ZFHX2
ADGRF1
DST
RAB1A
BEND6
XRRA1
SPCS2
GTF3C5
PON2
ZNF337
MRFAP1
ANKRD36B
CTTNBP2NL
KATNBL1
PITPNC1
CYP2R1
TMCC3
CHCHD3
TBC1D19
ZNF451
PTPN4
UBR2
TPBGL
PANK3
PCCB
AZIN1
NUMA1
LRTOMT
SLC9A8
PRR5L
ENOX1
GOLGA7