ChIP-Atlas: Target genes

Potential target genes for SOX9

Query protein: SOX9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX13867212 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX9's Target genes

◢ SOX9: Average

◢ SRX718108: hESC derived pancreatic cells

◢ SRX4065343: hESC derived retinal cells

◢ SRX4065344: hESC derived retinal cells

◢ SRX4065345: hESC derived retinal cells

◢ SRX4065346: hESC derived retinal cells

◢ SRX4065347: hESC derived retinal cells

◢ SRX4065348: hESC derived retinal cells

◢ SRX11220467: HT-29

◢ SRX11220468: HT-29

◢ SRX768290: HT-29

◢ SRX11416753: KARPAS-422

◢ SRX11856133: LNCAP

◢ SRX11856134: LNCAP

◢ SRX11856137: LNCAP

◢ SRX11856138: LNCAP

◢ SRX11856139: LNCAP

◢ SRX11856140: LNCAP

◢ SRX11856141: LNCAP

◢ SRX11856142: LNCAP

◢ SRX359919: LoVo

◣ SRX13867212: MCF-7

◢ SRX13867213: MCF-7

◢ SRX13867216: MCF-7

◢ SRX13867217: MCF-7

◢ SRX10175282: PANC-1

◢ SRX10175283: PANC-1

◢ SRX1510444: VCaP

◢ SOX9: STRING

RTEL1
SLC35E2B
MTRNR2L8
SLC35E2A
TINAGL1
MTRNR2L2
POR
C2CD4D
PPDPF
GPSM3
ARRDC4
SMARCD2
CDYL
SNAP29
PI4KA
PFDN4
NOXO1
IQCH
AAGAB
POLG
PDXDC1
RGPD2
RGPD1
PRKCI
MTF2
MYH14
PARK7
TAF15
SH3KBP1
PRDX2
CDC25C
PPIB
SNX16
DOLPP1
FAM53C
OGA
EIF3B
CNOT6
KLK6
PGBD4
EMC7
ANKRD13A
MAF1
PCDH1
RNF13
PTDSS1
MTERF3
GNB2
LSR
STX16
KHSRP
ATG101
ZNF775
EED
FRAT2
FAM227B
DTWD1
CENPN
SLC35A5
ATG3
PHRF1
RHBDD3
EWSR1
USP15
ATG16L2
UIMC1
PLEKHG4
PIK3R3
SPATC1L
MYO9B
HAUS8
AKIRIN1
PRR19
PAFAH1B3
CDCA7L
YY1AP1
DAP3
HMGCS1
NDST2
MRPS24
PMVK
DNAAF3
SLBP
PRKDC
MCM4
UNKL
STIP1
MYL12B
UROS
PDE8A
BCCIP
FAM102A
PTOV1
DNMT1
ZNF219
ETNK1
FOS
ATP6V0C
SPTBN1
COMMD6
TIGD5
EEF1D
KMT5B
KAT7
WWOX
PAQR4
UBE2C
RASSF7
LMNTD2
BRAT1
DGAT2
RMND5B
TMEM160
PPP6R1
BZW2
ANKMY2
ZNHIT1
PLOD3
CFDP1
PAXIP1
UCHL3
KCNH8
FLCN
LAMB3
RMND5A
PPP5D1
CALM3
SETD5
BCL6
WASL
MYL12A
RTKN
XRRA1
SPCS2
EIF2D
OXR1
HMGB1
FUS
STK35
ACSS1
RPL35
ARPC5L
HNRNPL
USPL1
KANSL3
CIC
TEPSIN
NDUFAF8
DGLUCY
PNN
E2F6
CDIPT
ZNF609
CCDC59
SLC25A42
ANKRD39
FRAT1
NOL8
CENPP
ZNF8
PROSER3
FAM83D
ZCCHC4
LIN54
CDON
ITGA6
SHKBP1
MTBP
MRPL13
MTRNR2L9
NWD1
C21orf91
CCNL2
TSPAN4
POLR2L
MRPS31
USP3
DBP
SSBP1
MAT2A
RNF103-CHMP3
RRBP1
ZFAND3
C6orf226
FANCI
HSPB6
H3C6
FAM72C
UBE2B
CDKL3
PIP4K2B
DPP9
MBLAC1
ARNTL
DPY19L4
GTF2IRD2B
DRAP1
C11orf68
ULK4
CNOT3
FGFR4
PSMD14
PSIP1
SELENOW
ARHGAP19
ZFAND4
RBM7
C11orf71
PGP
LUC7L2
RAB4B
PRDM10
OGDH
MLST8
SYVN1
LAD1
HHIPL1
CCDC85C
RRM2
TP53BP2
CNOT1
SRI
TMEM260
SRGAP2B
FAM72D
TMEM45A
TTLL7
FRMD5
ZNF335
CNP
RPN2
MROH8
AP2A1
UFSP2
TOP2A
NDUFB1
HDAC2
CPSF2
TANGO2
ARVCF
MTCH1
MIA2
CYP2R1
LEPROT
LEPR
DISP3
STK32C
LRRC27
THOC1
SLX1B
SLX1A
BOLA2B
BOLA2
NUCB2
PRCP
HBB
SOD2
KIAA0319L
STX18
SLC5A1
KANK1
ANKRD12
RUBCNL
MRPS11
MRPL46
PRKACA
SMC3
TARDBP
RPL22
UBA1
ZMYM5
RNASEK
CBX5
PRR3
GNL1
ATAD2
SS18
TLE3
STXBP3
DNAJC14
ATP8A1
ANP32A
TMPRSS3
MRPL21
IGHMBP2
TES
TRAF2
OSBPL2
LANCL2
UBE2A
ATP5MC1
ACAP2
TBC1D17
SERTAD1
ALKBH7
AKT1S1
TUBB4B
PRRC2B
CAPS2
WASHC5
NSMCE2
ZNF180
UQCRC2
PDK2
SORT1
PELI1
MSANTD4
DDIAS
PPP1R13L
PLPP2
KMT5C
C2orf42
LRATD2
AP3S2
FMN1
BAZ1B
FOSL1
UQCRQ
GDF9
MBNL1
SELENOH
INTS12
GSTCD
SRGAP2C
GBA
FAM72B
PIF1
BOLA2-SMG1P6
NUP107
SKA2
PRR11
ADAP1
HECTD2
PLAG1
CHCHD7
ZMYM2
SRGAP2
FAM72A
NOCT
ZNF572
PSMD6
LRCH4
FBXO24
ATF7-NPFF
ATF7
HDAC1
KCTD2
ATP5PD
TRIP4
FMC1-LUC7L2
FMC1
FBXO5
FDFT1
ABTB2
HNRNPA1
SP2
POLR2J3
NUF2
BCAS3
NCOA3
SSNA1
ANAPC2
ITGB3BP
EFCAB7
RASEF
EFNA4
SPRYD3
EIF2AK3
PACSIN2
PANK2
WRAP53
TP53
CENPE
ARHGEF38
EIF1AD
COQ8A
BANF1
NFE2
KIF1B
MRPS23
RAB33B
GOT1
TMEM168
NLK
H2AZ2
RPL19
ARAF
HOMEZ
FAM228B
GTF2H2
SEPTIN9
ISOC2
ZNF687
TCP11L2
SLC33A1
LSG1
MRPL40
HIRA
ANKHD1-EIF4EBP3
ANKHD1
PPM1D
SLC24A1
INTS14
TRIM37
SLC11A2
INAVA
SMC4
IFT80
ABCB8
MADD
CLTC
HR
UTP18
MBTD1
ATP5F1E
NFYC
MGRN1
SLC35B2
GPR137
BAD
SF3A3
NARF
ADPGK
PELATON
RNF6
DSTYK
DCLRE1B
AP4B1
SLC44A1
NR6A1
RABGEF1
RBBP5
PDIA4
MYT1
MRPL44
EMSY
PTP4A2
GTF2H2C_2
RBM42
PKNOX1
NCDN
PEX3
ADAT2
VBP1
PCLAF
C7orf57
HBP1
CANX
TRIM2
TMCC3
UFD1
CDC45
TMEM258
FEN1
TMEM242
MRPL45
HNRNPUL1
GIPC1
COPS7B
WDR62
THAP8
ZNF574
WDR11
MED23
CSNK2A1
PRKAB2
CHD1L
COMMD2
TOMM40
POLR1G
EFNB2
HDGFL2
FZD1
GGNBP2
BACE1
SREK1IP1
CWC27
TFPT
PRPF31
COA1
PRR7
DHX36
ABHD2
TMTC4
B4GALT7
RAB5B
TTBK2
RPS7
DOHH
TESK2
GTF2IRD2
RPS29
RAB28
DIAPH1
SNX17
EIF2B4
CDKN3
PRKAG2
PTCD3
POLR1A
PMF1-BGLAP
PMF1
H2BC12
H2AC12
CALR
LEMD2
ZNF300
MIA3
FBXO33
CCDC12
VMP1
PTRH2
ZKSCAN1
TMEM60
PHTF2
CNPY3
ZSWIM4
GTF2H2C
DAZAP2
RPL26L1
RUVBL2
GYS1
G3BP1
PAK4
PSPH
CCT6A
MEIS1
KCTD7
IFT46
PRORP
PPP2R3C
OSBP
FAM227A
CBY1
DICER1
LRRC37A3
WDR74
RWDD1
VIRMA
ATP5F1B
YJU2
CEP63
ANAPC13
SPTLC2
H3C15
H3C14
ZNF862
PARD6B
ZNF24
KCNAB2
RBM28
PAIP2B
NOL11
MYADM
MTMR14
RFX1
NDUFS7
SCAND1
CDK12
FAM110A
ECHDC2
HNRNPC
ACTN1
DENR
FANCF
CD164
MIA
OPA1
H4C15
H4C14
B3GALT2
KMT2A
OPA3
HEXIM2
RBM48
PEX1
SLC46A3
FAM217B
IFT52
UTP23
ARHGEF5
AK2
UBC
RBM27
EFR3A
CDK16
TADA3
ARPC4-TTLL3
ARPC4
TSR3
GNPTG
CCT5
ATPSCKMT
UNG
S100A13
ZSCAN22
SF3B6
TATDN1
NDUFB9
CHCHD6
ARL6IP1
KLF10
NSFL1C
EIF3E
CYTH2
RPS19
BRIP1
ECPAS
GATAD2B
SH3TC2
FRA10AC1
SASH1
MOCS3
DPM1
BICD2
ATL1
USP30
GALK2
COPS2
ACAT2
TYK2
PTCD2
MRPS27
DYNLL1
TRIB1
TBC1D31
SLX4IP
RAB7A
TOM1L2
RPL27
METTL9
DRC3
WDR36
PPFIA3
HYAL2
C19orf73
IVD
CUL2
RHPN1
NDUFS3
KBTBD4
GTF3C3
DCUN1D4
RBBP8NL
LDHA
TMEM41A
PALB2
GSN
DCTN5
CFAP20
CDK2AP1
ARL14EP
DDX41
PPP2R2B
YIF1A
TOM1
TMEM209
CFAP221
MTMR12
SYT7
PPP4R3B
MAN2C1
AURKAIP1
ATP5IF1
ADI1
SETDB2
KPNB1
ING1
CAB39L
INO80C
SMARCAL1
NME1-NME2
NME1
STAT1
SLC25A38
PKM
KRT8
MAN1A2
CALU
THEM4
FASN
TMEM222
RUVBL1
PRMT1
NSA2
KATNB1
GFM2
COPS5
CCDC130
ADNP
DGCR8
HGS
ARL16
LRPPRC
SLC25A10
HIBADH
SUPT7L
SLC4A1AP
POLR3E
POLR3B
MAPK1IP1L
USP32
TPBG
CLDN3
ASH1L
STAT3
GABPB1
RPL37
NPAS4
NBN
FAM133B
ADGRL1
SOX6
RLN2
RNF139
TMEM218
SMG8
FYN
EIF3F
AFF1
HEXA
CHD6
SLC25A25
RB1
NAIF1
NPL
PDE4DIP
USP8
SC5D
SIPA1L2
COBLL1
AP4E1
ZDHHC5
KANSL2
ENPP5
NF2
GOLGB1
WDR53
FBXO45
HSCB
CHEK2
ZNF277
F11R
DOCK4
CCNC
ARID2
SDF2L1
CKAP5
SKA3
SIRT2
NFKBIB
MRPL57
ZBTB45
TDRKH
SUPT20H
SP1
ALDH4A1
ZNF165
UBN1
GLYR1
ZSWIM1
CCDC102A
PI16
CSDE1
SPSB3
GTPBP10
SRRT
PLEKHF2
CEP164
GPR108
NECTIN3
HUS1
DPP3
ZMPSTE24
SPATA13
MRPL42
DDX1
CRBN
ALG10B
TMEM65
PPP6R3
PGBD2
EFCAB2
COPS4
LRRC61
ACTR3C
ZNF564
PPWD1
CENPK
CFAP77
FBXO31
RBBP6
GGCT
ZNF212
RTF2
TK1
TMEM170A
OARD1
NFYA
DRG2
ZC3H6
MTMR7
UBE2I
SLC35B4
ATG9A
ANKZF1
MTIF2
GSTA4
SRXN1
TPST1
CHCHD3
PABPN1
OBP2B
GATAD2A
TRMT61B
TPRN
DOT1L
PPME1
MPHOSPH8
GRK6
C2CD3
HEATR5A
SLC39A13
PAPSS1
LSM5
PGAP2
CNPY2
KLF5
FSIP1
SPHK2
LIMCH1
RMI1
MAOA
HNRNPK
TNRC6B
RTTN
CLDN4
RPL18
PLOD2
ENSA
PLS1
UCKL1
MKRN2
KLF6
CWC25
PRKCZ
KANSL1
JPT2
SSR3
PTPN13
N4BP3
CENPA
ATL3
PGC
MICU2
SCAF8
RNFT1
RCL1
KMT2E
PLA2G7
CCNB2
CBWD5
RHOT2
EGR2
WDR45
TSPAN31
SEC13
MRPS18A
FAR1
NUDT16
MCIDAS
DIAPH3
EPYC
BNIP1
MAPK14
UCHL5
RO60
CYP51A1
SART1
GTF3C5
ANLN
RLN1
ETV6
CCNI
TMEM94
TBC1D10B
PLEKHG5
MYLPF
EEF1AKNMT
P4HB
LMCD1
ENPP4
CLIC5
FCHSD2
ERCC6L2
SPAG7
RPS20
SZRD1
SAP30L
CDK5RAP2
ZSCAN25
IREB2
ZNF787
FBXL19
ZNF484
CAPRIN2
PPP2R5A
CCDC174
DNM2
CLPB
PRR14
GOLPH3L
TEDC1
CDIN1
ARID1A
INTS5
FKBP3
TRMT2A
RANBP1
HAGH
FAHD1
CCNL1
RAB40B
PSMF1
MZT1
EHBP1
BORA
ARHGAP27
MRPL16
ZNF143
VCPKMT
FRMD6
ALKBH3
CTNNB1
ZNF273
FAM156A
TNRC18
SPNS1
MLEC
PIK3R1
AAR2
LNPEP
SERPINI1
PDCD10
MALSU1
POLR1F
MRPS18C
HELQ
GARS1
AGFG2
VPS50
USP31
SHOC2
MCM7
HEPACAM2
BBIP1
AP4M1
LRRC59
GTF2H4
DCAF10
TTC26
TBL3
SCAF11
TMEM248
PRDX1
LOC101927572
LENG1
FKBP9
ALKBH6
HNRNPR
SUGCT
PTMA
MPLKIP
MAST4
RAVER1
MBD4
IFT122
HACD2
GET3
EFNA1
AP3B1
SYT1
CROT
BBS9
TBC1D30
BTBD3
PSMD3
PLEKHM3
PPP1R3D
DMTF1
ZSCAN2
RAB40C
SIRT4
SUPT5H
RINT1
KIF22
DCAF7
CTHRC1
ATP5MC2
POC5