ChIP-Atlas: Target genes

Potential target genes for SOX9

Query protein: SOX9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX359919 | LoVo
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX9's Target genes

◢ SOX9: Average

◢ SRX718108: hESC derived pancreatic cells

◢ SRX4065343: hESC derived retinal cells

◢ SRX4065344: hESC derived retinal cells

◢ SRX4065345: hESC derived retinal cells

◢ SRX4065346: hESC derived retinal cells

◢ SRX4065347: hESC derived retinal cells

◢ SRX4065348: hESC derived retinal cells

◢ SRX11220467: HT-29

◢ SRX11220468: HT-29

◢ SRX768290: HT-29

◢ SRX11416753: KARPAS-422

◢ SRX11856133: LNCAP

◢ SRX11856134: LNCAP

◢ SRX11856137: LNCAP

◢ SRX11856138: LNCAP

◢ SRX11856139: LNCAP

◢ SRX11856140: LNCAP

◢ SRX11856141: LNCAP

◢ SRX11856142: LNCAP

◣ SRX359919: LoVo

◢ SRX13867212: MCF-7

◢ SRX13867213: MCF-7

◢ SRX13867216: MCF-7

◢ SRX13867217: MCF-7

◢ SRX10175282: PANC-1

◢ SRX10175283: PANC-1

◢ SRX1510444: VCaP

◢ SOX9: STRING

MTRNR2L8
MTRNR2L2
RGPD2
RGPD1
CCDC59
CCT2
MAN2C1
H4C15
H4C14
IMP3
S100A13
CHTOP
MTRNR2L9
SLC3A2
NDUFS7
LRP6
SRCAP
LOC730183
TMEM179B
PRMT2
CZIB
TMEM248
DPP8
TTLL4
TBRG4
OIP5
NUSAP1
POLR3B
ATF7-NPFF
ATF7
NFYC
LARP1
MTRNR2L10
STEAP2
RTTN
CLK1
SF3A1
CCDC157
DCXR
ZSCAN22
SRSF7
HMGB1
USPL1
TMED1
EIF4B
PDCD2L
HSPBP1
AMACR
TMBIM6
CAAP1
SUPT7L
SLC4A1AP
STAMBPL1
SLC25A6
MBD4
IFT122
DCP1B
ZSCAN25
TP53I3
CAPRIN2
H2AX
NBPF1
UTP23
VPS37A
CNOT7
SPOP
DNAJB12
LMTK2
NAGK
NDUFB3
FAM126B
RSL24D1
SMIM15
POLD1
SPTLC1
UBE3B
PISD
ST3GAL3
SNX8
PDCD6IP
RPL5
WASHC4
SMIM10L1
PRH1-TAS2R14
EIF2D
SEMA4B
TTC14
RARG
TRIP4
UFC1
FAM227B
DTWD1
DDX41
TFDP1
CYP51A1
VAMP4
AP3S2
DENND4A
TOLLIP
POLR2J3
RBM28
NDUFS3
KBTBD4
C12orf66
MRPL53
RAD51
MPHOSPH10
MCEE
EIF3CL
EIF3C
TNPO3
KIAA1958
C9orf147
PNP
DSTYK
MTIF2
GPN2
AASDH
BAZ1B
ESYT2
L3HYPDH
JKAMP
STRAP
FBXO22
METTL1
EEF1AKMT3
THNSL1
POLG
HMGCR
XRCC6
DESI1
THG1L
PGBD2
ZNF408
ARHGAP1
ZNF687
STAT6
GNL2
TMED3
KTI12
LEO1
TAF10
GMNN
MRPL44
SLC52A3
SMDT1
TRIM59
PPM1D
DIABLO
AKAP9
MTPN
LUZP6
EIF3E
AKR1A1
P2RY2
XPR1
VAMP1
MRPL45
PDE4A
LUC7L2
TOR1AIP1
REX1BD
SF3A3
HUS1
XPOT
CUL5
PAFAH1B2
SSBP1
OGDH
NBN
TTC4
PRC1
GOT2
STYXL1
WDR6
PPFIA3
C19orf73
MFAP3
FAM114A2
MRPS17
MAP3K5
DUS3L
PRCP
DDIAS
KLHL12
NOP16
HIGD2A
C6orf226
RPS13
COX7C
GRPEL2
SAR1B
MRPL1
CYCS
SUGCT
MPLKIP
TCAF1
SNAPC5
ANO10
ABHD5
MRPL48
TSFM
FNTB
ACYP2
SEPTIN2
HDLBP
PPP3CA
NUP107
LARP4
MGAT1
MZF1
LSM5
STXBP3
H2BC5
UGGT1
ITFG2
AAAS
TLDC2
PSME3
H2AC19
H2AC18
SLC12A9
MEST
TARBP2
MED11
KRT18
NDUFB2
GTPBP3
ADPRS
EDEM2
HEXA
HACD2
BORCS7
GOLPH3
FBXL13
ARMC10
PPIL3
NIF3L1
ZNF394
FIGNL1
CCT5
ATPSCKMT
SBDS
SCAMP1
SLC24A1
INTS14
CDK5RAP1
ADAM15
TXN2
RAB27B
MRPL3
ASNS
HPS5
GTF2H1
FRMD3
MYG1
NACA
RAB19
ABCB8
ATP5MC2
MMADHC
H3C4
PTPA
CRAT
UROS
BCCIP
MRPL42
KANSL1
PPIP5K2
GIN1
C12orf65
SWSAP1
COX14
YEATS4
YARS2
PIK3R3
PMPCB
CEP83
PPIL2
MTRNR2L6
LRRC73
FUT11
DMAP1
LLGL2
DHPS
MLF2
ZNF391
RFC4
MRPS36
MAF1
TSSC4
TARS3
VPS52
RPS18
PLK3
DPY19L4
ZNF165
MCCC1
EIF3J
AGK
UNC13B
CHST12
YTHDC1
SEH1L
NHLRC1
ANO6
BLOC1S2
ITGB3BP
EFCAB7
CBWD5
MALSU1
CBWD3
SECISBP2
LTA4H
ATP5MF-PTCD1
ATP5MF
METTL7B
LRATD2
ZBTB45
HAGH
FAHD1
NDUFAF1
MRPS31
AHCYL2
H4C5
PLEKHM3
TIPARP
ELAC2
CCDC43
DCPS
C12orf57
WDR4
PIGO
LYSMD3
RAB5B
DCAF10
CBWD6
NRL
DCAF11
SLC25A28
INTS2
TDG
BCDIN3D
RPS27L
CLUH
MCRS1
CCDC97
RPS6
TMBIM4
POLR2J
MBTPS2
TPM3
GALT
BNIP2
SNX17
EIF2B4
GARS1
SND1
TBC1D19
SRGAP1
TATDN3
NSL1
PAIP2
CNOT2
CHAC2
DDX21
H3C15
H3C14
PSMD9
HPD
CASC3
SNRPE
SLC25A21
GPR35
ZNF212
MRM3
GLOD4
PDE7A
RNF111
CBX5
HNRNPA1
NUP155
RAG1
GHITM
TRAF6
IMMT
FAM71E1
EMC10
TMEM251
MOAP1
ORC4
MBD5
YY1AP1
DAP3
ZMPSTE24
TTC26
DDX46
ASCC3
BLOC1S6
TAF5
HNRNPU
PEX3
ADAT2
CALU
GABPB1
CCNB2
BBS9
FAM120B
RAPGEF6
GPN3
FAM216A
H4C4
RBM6
CFAP298-TCP10L
CFAP298
ACADVL
SLC11A2
B9D1
EID1
RNF14
SMPD1
KBTBD8
FGFR4
PCID2
CUL4A
MRPS35
NDUFAF2
ERCC8
SEC11A
UBE2K
MYLIP
SIRT6
ANKRD24
TMEM87A
GANC
TMEM168
THOC3
COX18
LPCAT4
FIS1
POLR2J2
TPRA1
MCM2
PDIA3
MBD1
CHMP4A
TBK1
TMCO6
SMARCAL1
PSMC4
PRKRIP1
FANCA
RRN3
SLMAP
BMF
ATG5
NBPF12
MTHFS
NPM1
TFPT
PRPF31
PMF1-BGLAP
PMF1
AK2
USP8
NUP214
POLR2G
SLC25A13
ZCWPW2
AZI2
PIGW
MYO19
FAM168A
RPS26
CCNC
CHCHD3
GET4
TRMO
ZNF250
CHMP7
CEP70
ATF2
SORD
ZNF561
COMMD1
CCT4
TOMM22
FAM185A
SLC10A7
RTF1
RPL28
RAD51AP1
C12orf4
FAM217B
USP30
FAM133B
MRPS18C
HELQ
PPP1R3D
WDR61
PUS7L
IRAK4
EIF4A3
TRUB2
COQ4
ZNF770
TRAPPC4
RPS25
PRPF8
NME1-NME2
NME1
RINT1
GLCE
PAAF1
COA4
WDHD1
SOCS4
SRSF2
MFSD11
STT3B
NARF
TMEM209
PCNP
ARIH1
PIGF
CRIPT
ERAP1
PARP2
INTS7
DTL
ADIPOR2
ADSL
SLF1
KIAA0825
BRF2
TFB1M
GSTM4
SCAND1
CDK4
ICE2
HECTD1
FANCD2
NUTM2E
LRRC57
HAUS2
BPHL
RPP25
STX18
GTPBP10
NUP42
GOLGA3
RFC5
H4C8
TRIM36
DNAJC19
CTSL
INO80
ANKRD13D
CRADD
MAD1L1
PCNA
SDHAF3
BRMS1L
DUS2
DDX28
NXT1
CETN3
TRIM56
H3C13
H2BC4
H2AC6
HCFC2
GLT8D2
RASA1
SLC25A17
OCIAD1
H2BC18
CNPY3
PPWD1
CENPK
WDR70
FGD4
OTULIN
PARL
NDUFB7
ZCWPW1
MEPCE
ATG4C
ACY1
NAV1
EFHD1
PSMD8
CCDC77
POP7
SUMF2
KDM5A
TMED5
CCDC18
RASSF6
NOP2
CAP1
FKBP9
AP2B1
IPP
NUDT15
TAF13
RPS15A
ZDHHC17
RPRD1A
PTPN23
ATL1
SEC31A
NAT10
MAP4K5
SCFD1
RPS3
SMIM4
SCAMP2
ZBTB49
LYAR
TRUB1
CLSTN1
PGAP2
CFAP43
DYNC2I2
FOXJ3
KNL1
KBTBD3
AASDHPPT
KAT7
PDIA4
COA1
CSDE1
CLDN4
SCYL3
ZFC3H1
THAP2
METTL8
DCAF17
TFRC
NAA35
ESR2
H2BC12
H2AC12
SPATA5L1
GATM
NOL7
MVK
ZNF672
ZNF786
CMTR2
CCNT1
DTD2
SDHD
RIF1
TEDC2
DHRS4
RGL2
PFN1
NOP14
GRK4
PA2G4
TMEM267
FBXW7
EXOSC10
PLD6
THBS4
MTX3
EXO1
SERINC4
KITLG
HYPK
SRRT
THAP5
DNAJB9
SRSF11
PLPBP
STYK1
RAB11A
YWHAE
NUTM1
NOP10
PPP2R5C
NAPRT
PMVK
PLEKHF2
PNPLA8
EIF2S1
ATP6V1D
PPA2
TMEM106B
UNC50
COA5
PLPP5
CENPS-CORT
CENPS
P4HA1
SYNCRIP
HSD17B4
C6orf136
SLC1A3
POLB
LPAR5
KLHL18
KIF9
SMG8
MICU2
MRPL24
PCLO
RPL6
PTPN11
L2HGDH
DMAC2L
PSMD7
ZBTB6
TIMM10B
ARFIP2
NIPA2
NOL12
JMY
ATP5F1A
ASH1L
MRPL16
CEP135
PRMT9
ZNF740
CSAD
AMD1
OGG1
CDK19
PWP1
MIF
ATG101
TMEM260
USP48
TARS1
ARHGAP18
TET3
ZC3H10
CSE1L
TMED4
SPRED1
DPAGT1
TMEM116
ERP29
MAPK1IP1L
OARD1
NFYA
EIF4H
PBLD
HNRNPH3
APC
YWHAG
CTH
GFM1
LEMD3
METTL2B
C15orf61
BCKDHB
ATAT1
ANAPC10
ABCE1
LCMT2
ADAL
RPP21
TIMM13
RPL39L
GINS3
PRR19
PAFAH1B3
ETNK1
DECR1
MAP2K1
GPT2
C11orf65
ILF3
SEC24A
SETD4
POLR2E
MBD6
EVI5
SLX1B
SLX1A
BOLA2B
BOLA2
ADPGK
ISG20
PRMT3
EPS8
RAD52
HEMK1
MRPS30
UTP20
SGK2
TXNRD1
RHBDD1
GTF3C4
DDX31
CHEK1
BCAT2
RNF13
IVD
CCNI
OTUD7B
SARNP
ORMDL2
TNFAIP8
IPO11
IPO8
FEM1B
EPRS1
BCLAF1
CALCOCO2
PGM2
VWA7
FEM1C
CAD
POC5
CDKN2AIPNL
ATR
GPHN
GLG1
MAGEF1
POLE3
C9orf43
CLPTM1
PKP4
CCDC148
PIF1
HNRNPA0
ITGB1
LENG8
THAP10
LRRC49
PPP5C
ASCC1
ANAPC16
SNUPN
POLR2M
STARD9
RSU1
AGGF1
NUP35
VPS39
SUB1
PSMD6
CEP120
SELENOT
TMEM138
CYB561A3
EIF3M
RBX1
TSTD3
METTL2A
ERI1
L3MBTL2
ATP6V1F
ZFYVE27
SNX13
CDKN2B
SLC16A1
SARS1
MARS1
GDA
ARHGAP9
PSMD14
RMI1
HNRNPK
ANAPC5
NDUFA5
UBOX5
FASTKD5
YKT6
MACROD1
UMAD1
SKAP2
NFX1
LACC1
CCDC122
NDUFA2
IK
TCAF2
SNRNP35
CDK18
RPLP1
NEK1
NUBP1
WDR74
SIRT4
FDXACB1
C11orf1
COX5A
TBC1D5
TMEM217
TBC1D22B
BSDC1
PLEKHJ1
ABRAXAS1
PPRC1
SF3A2
PGLS
H3C7
AGO3
ENSA
BNIP1
ARL4A
TRAFD1
JAK2
FTL
NDUFA12
MINDY2
SLC35A4
APBB3
WWTR1
CRCP
PPP2CA
GLIS2
DRG1
TPST1
SPNS1
C7orf25
CCDC107
VPS13B
RAB10
CS
ERCC6
FAU
EMC4
AGL
JMJD7-PLA2G4B
JMJD7
RRP7A
PEF1
SMYD5
CNDP2
ATAD1
USP15
ERCC6L2
NR1H3
ACP2
RPL22L1
FAM98B
RETSAT
STK19
DXO
CCNDBP1
MTLN
SLC19A2
ZNF596
MAPK1
SIRT5
GSTK1
CYB5R3
UBE2B
CDKL3
STAT1
H4C12
BRIX1
MARCHF3
HERC1
SLC6A6
ZNF624
CCDC90B
CUTC
COX15
MOCS2
RPUSD2
ZFYVE19
DNAJC17
TCTA
RHOA
TMEM175
GAK
KRBA2
DPH1
MYH7B
GSS
C16orf46
SERF2
MFSD5
MEAF6
MCCC2
LOC114841035
LMAN1
FKBP2
HEATR5A
TEFM
PDE4D
CUL7
NDUFA6
QTRT1
NCK1
NECAP1
TBC1D22A
R3HDM2
HELB
DDX50
RPL22
CLTC
RABGEF1