ChIP-Atlas: Target genes

Potential target genes for SOX9

Query protein: SOX9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX11220467 | HT-29
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
SOX9's Target genes

◢ SOX9: Average

◢ SRX718108: hESC derived pancreatic cells

◢ SRX4065343: hESC derived retinal cells

◢ SRX4065344: hESC derived retinal cells

◢ SRX4065345: hESC derived retinal cells

◢ SRX4065346: hESC derived retinal cells

◢ SRX4065347: hESC derived retinal cells

◢ SRX4065348: hESC derived retinal cells

◣ SRX11220467: HT-29

◢ SRX11220468: HT-29

◢ SRX768290: HT-29

◢ SRX11416753: KARPAS-422

◢ SRX11856133: LNCAP

◢ SRX11856134: LNCAP

◢ SRX11856137: LNCAP

◢ SRX11856138: LNCAP

◢ SRX11856139: LNCAP

◢ SRX11856140: LNCAP

◢ SRX11856141: LNCAP

◢ SRX11856142: LNCAP

◢ SRX359919: LoVo

◢ SRX13867212: MCF-7

◢ SRX13867213: MCF-7

◢ SRX13867216: MCF-7

◢ SRX13867217: MCF-7

◢ SRX10175282: PANC-1

◢ SRX10175283: PANC-1

◢ SRX1510444: VCaP

◢ SOX9: STRING

BCL9L
TINAGL1
C2CD4D
NOXO1
GFER
CDYL
SH3KBP1
LRRC75B
GGT1
GPSM3
KLK6
PCDH1
SLC35A5
ATG3
NOTCH1
PPDPF
TMEM63A
LAMB3
DNAJB1
WWP2
SLC5A1
COX19
RBM7
C11orf71
CYP2W1
ETNK1
MTF2
PLEKHB1
TP53BP2
KCNH8
SNAP29
PI4KA
FRMD5
PLEKHG4
UNKL
IL17RB
CHDH
CFDP1
TNS2
PDE8A
XRRA1
SPCS2
TMPRSS3
SLA2
IRF2BP2
CYP2R1
SPTBN1
ADAP1
PSMD14
MTBP
MRPL13
ACSS1
THOC1
HECTD2
HMX3
XPA
ECPAS
SHF
SPTBN4
CABP7
SEPTIN9
CNFN
TNRC18
TSKU
RB1
PELI1
PLPP2
RASEF
EFR3A
NWD1
RABGEF1
ZNF609
RAB33B
FOXA2
STXBP3
SLBP
TTYH3
H3C6
LEPROT
LEPR
ITGA6
ETV4
STK32C
LRRC27
PELATON
DENR
FMN1
ZNHIT1
PLOD3
NPL
MACC1
NRARP
KIAA0895
ECHDC2
ANLN
NCMAP
FRG2C
ZFP36L2
PAQR4
SPATA20
OBP2B
LSR
FGFR4
IGSF10
ZNF862
ATAD2
POLG
ARHGEF38
CCDC9B
CLIP2
OGA
FRG2
ARHGEF1
GGNBP2
DNAJA4
TLE3
EFNA4
BICD2
NQO1
SDHAF1
TTC30B
NFE2
SH3TC2
RTKN
TES
XKR8
ZNF572
TRIM47
USP3
NBEAL2
CCDC12
STARD3
PPP1R1B
ACAP2
NPNT
LEFTY1
LMF1
TMCC3
LDHA
CPSF4L
SUPT20H
TRIM29
MAN1A2
SDHC
MPZ
PDP1
POR
SHOC2
BBIP1
RAB4B
MIA
GNG8
SMC4
IFT80
MYH14
CLDN3
TP53INP2
SETX
PLOD2
PTK2
CAVIN1
ETV6
TBC1D14
LYPD3
PHPT1
MAMDC4
ZFAND4
SLC26A8
MAPK14
PAQR6
SMYD3
RNF169
TMEM168
FOXO1
RUNX1
AAR2
CCN2
TACSTD2
RCC2
SLC16A3
BTG1
DTNB
COA1
ZNF473
VRK3
DNAJC14
MET
ZBTB38
ZSCAN2
UTP23
NF2
FZD6
SPATA5L1
GATM
MVB12A
COBLL1
TYMP
SCO2
ODF3B
COL23A1
LRATD2
OTUB2
FARSA
CALR
TTC23L
PPIC
NCOA5
PPP6R1
TMEM209
SSMEM1
IQCH
AAGAB
LIMCH1
FAM91A1
C17orf58
GLIPR1L1
CAPS2
ABTB2
RRBP1
FAM227B
DTWD1
SLC35E2B
RTN4RL2
PCP2
STXBP2
PIGBOS1
PIGB
LHPP
LIPG
CRY1
CDC42BPG
PLA2G2E
FNDC3A
KRT15
DOCK9
SLC35B4
ABCD3
LMO7
SMARCD2
TATDN1
NDUFB9
NDUFB2
CCSAP
UGGT2
FOXC1
WDR93
PEX11A
TUBGCP5
BCL2L11
ATL3
NECTIN1
FBLIM1
PFDN4
PIP4K2B
SLC44A1
GBA
OGT
USP15
PAIP2B
SBF2
WDR61
FSIP1
MCIDAS
CALM2
DBP
ALOX5
SLC35E2A
SPATA9
RHOBTB3
ZCCHC4
MRPS31
APBB2
IKBIP
APAF1
KANSL3
FER1L5
PBX3
PPP1R9B
LZTS3
SHKBP1
FKBP5
RNF135
NCAPG
ARHGEF17
CACNA1S
ASCL5
HSPA6
MEMO1
CCDC93
KMT5B
FOSL1
SRP14
BBS9
FAM228B
PFN4
NME4
DECR2
E2F6
PTEN
KLLN
CCNI
ERCC6L2
RGS3
TBC1D30
THBS1
ARNTL
PSMD5
HILPDA
KCTD12
ZNF180
CHSY1
PRKAR2A
RPS29
LRR1
ZNF264
RPL26L1
FST
NUP85
EFNA1
EIF1AD
BANF1
PRR25
AMMECR1L
OTULINL
COMMD6
HGS
ARL16
BCL11B
FZD1
PTMA
NOL7
SLC4A8
GALNT6
IFT81
PRDX1
MITD1
GLCCI1
BTBD10
VRK2
MIA3
C17orf75
TMEM65
UROS
BCCIP
ARHGEF5
RPS19
PGBD2
DARS1
RPS11
HSCB
CHEK2
FCHSD2
RALGAPB
EEF1AKMT2
TESK2
RBM48
PEX1
KLF4
ERCC5
HMGB1
CD2BP2
MSANTD4
RHBDD3
EWSR1
SSBP1
CDK12
SCOC
POGLUT2
BIVM
USP47
TAF15
ARID2
CLDN4
PPP1CB
CCNF
TTC30A
UFD1
CDC45
STUB1
JMJD8
RHBDL1
CROT
TARS1
CEP152
CCND1
JAG1
RABGAP1
PPP5D1
CALM3
PRR7
DNAJC27
FAM200B
RRAS2
EPOP
NOTCH2NLC
GPR180
LFNG
USPL1
TRMT2A
RANBP1
TTC32
FNDC3B
COPG1
SFMBT1
SF3A2
PLEKHJ1
ABRAXAS1
CDKN2C
IFIT5
CDC42EP3
HNRNPA2B1
CBX3
TTC14
ELL2
CCNL1
NMI
USP48
MINDY2
CDADC1
AHCYL2
RBM34
AP3S2
PLS1
S100A2
PRCP
DDIAS
WASHC5
NSMCE2
PHF5A
ACO2
FGFBP3
SLC25A36
AQP5
MYL12A
C21orf91
PLA2G7
PTDSS1
MTERF3
RUBCNL
INTS12
GSTCD
RCL1
RPL27A
DYNC2I1
C8orf76
USP1
LDHB
SKA3
MRPL57
AMACR
UBR7
GON7
PRB1
HNMT
MRPL40
HIRA
ZNF614
TXNDC9
EIF5B
HYLS1
SLC39A10
ZC3H8
RBCK1
VMP1
PTRH2
COL9A2
WDPCP
MDH1
ARHGEF7
MYH9
SCYL3
PHLPP1
LIN54
PCNX3
MAP3K11
FBXO47
TBC1D31
MTHFD2L
PCNP
CCS
CCDC87
DNAJC3
C9orf139
ABCA2
SLC2A13
RNF103-CHMP3
RMND5A
ZFAND3
PTPN13
PTPN4
PPIB
PGM2L1
ITGB3BP
EFCAB7
NREP
DDR1
WDFY2
TMEM71
PHF20L1
LCN2
MRPS30
IQCC
DCDC2B
CCDC28B
IL1RN
ARID1A
POLR2G
PARK7
SORT1
NUP107
PPM1D
ZNF143
TIPIN
SECISBP2
BORCS6
MECR
PPL
EXOC6B
TRIM62
NOL11
IFRD1
ROPN1
UBE2I
ZNF195
SEPSECS
QTRT2
CCDC191
PRR19
PAFAH1B3
INO80C
ZBTB40
WDR27
C6orf120
RNF130
DPY19L3
DNAAF3
UCHL3
SYT7
MAFG
FGFR2
RIPK4
PLEKHA8
STARD4
SERTAD3
ASPH
RANBP9
NHLRC2
DCLRE1A
PGLS
EED
UCHL5
RO60
RINT1
KMT2B
CCDC7
GDF5
CEP250
EHHADH
FKBP9
GORASP2
ZDHHC24
ACTN3
LSM8
BCAR3
TOE1
MUTYH
PYROXD1
GNB2
KRT8
KLHL7
MED4
FAHD2A
TMSB4X
SETDB2
CAB39L
H4C12
MATN1
PRKCI
SNX17
EIF2B4
GGCT
DSCC1
THADA
NANP
YTHDF3
PROB1
MZB1
LY75-CD302
LY75
ADGRG1
DIAPH3
MRPL3
GRAMD2B
CARNMT1
IGFL4
LOC107984974
FAM83D
SPHK2
RPL18
FAM83E
STARD7
ZNF76
ASXL1
CHD2
FRG1
GSK3B
SPACA9
AK8
EMSY
GALK2
COPS2
SELENOT
NFKB2
PDRG1
RTN3
VANGL2
PAPSS2
DPY19L4
CCDC130
CRYBG1
RPN2
MROH8
PPP1R13L
POLR1G
GALNT3
MAT2A
UBE2F
TPD52
MED30
MRPS35
RAD21
G2E3
MAL2
NDFIP2
ACTR6
STX18
HEXIM2
KANSL2
ZHX1-C8orf76
ZHX1
HIKESHI
CD46
MOCS2
TMEM18
NUF2
GPR137
BAD
CUEDC1
KMT2D
SECISBP2L
NFATC2
RC3H2
COQ9
CIAPIN1
PIK3R3
PPP4R3B
ZNF497
PMS1
ORMDL1
CCNJL
WDR11
ARL14EP
KDM3A
TTC26
CTNNB1
ZBTB11
PTPDC1
UBR2
TSEN15
CEP126
ANGPTL5
ZC3HAV1L
SMIM11B
SMIM11A
RASGRF2
RUVBL1
CPEB3
LIG4
ABHD13
SQSTM1
DCBLD1
MARCHF5
MGAT4B
ARHGEF35
ZNF711
TTC39A
SATL1
PRKD3
GIT2
ANKRD13A
MRPL45
PNKP
TRMT61B
ZNF777
TENT5A
ELMOD2
COL9A3
CORO2A
TMEM9B
B3GALNT2
DMBX1
ZNF780A
PTBP3
PRKDC
MCM4
GTF2H2
GTF2H2C_2
RBM28
ARHGAP27
SAP18
CBLB
TP53I3
GADD45A
ITGB1
TCF12
EXOSC10
ZNF226
PDF
RNF19A
VPS50
HEPACAM2
OTULIN
HES6
REEP6
PCSK4
UBE2T
GTF3C2
LSG1
COMMD2
CCNC
ACOT2
ZNF576
IRGQ
ZCCHC9
NDUFV2
YPEL5
RPS27A
CLHC1
ZNF518A
SNRPG
WRNIP1
MYLK4
MRPS24
PTOV1
CALU
SNRPB2
PPP1R8
FAM98A
RNF139
SCAF11
TIMMDC1
ZNF280D
MTREX
DHX29
TNNI3
SMARCA5
C1orf115
NAGK
TRNAU1AP
TUBG1
RETREG3
EIF3A
DISP1
WDR53
FBXO45
IREB2
NUFIP2
FAM3C
C19orf48
CLCF1
CDC42EP1
CPEB2
C18orf25
INTS6L
EIF2AK3
KRIT1
ANKIB1
RPS27L
GSDMD
TNFRSF11B
COLEC10
NSD2
RTL10
GNB1L
SHPRH
PGBD4
EMC7
CDON
VIRMA
ZC3H6
THAP5
DNAJB9
HSPE1-MOB4
HSPE1
HSPD1
GPR37
ARL2BP
TSPAN12
TBC1D17
SHROOM1
AKT1S1
PTCD2
MRPS27
MRPL42
ERCC1
FBF1
RRM1
C6orf89
OTUD7B
NBN
RMDN2
TRMO
C9orf85
ABHD17B
DDX52
SHC3
STXBP4
COX11
GPSM2
UBC
WDR36
CFAP20
HAGH
FAHD1
ZNF770
ITGB5
ICE2
CSTF3
KIF16B
BET1
TRPT1
NUDT22
ITGB8
DNAJC4
SLC24A1
INTS14
GTF3C3
GLCE
ZNF451
MVK
COG7
BICDL2
VPS36
CKAP2
TRAPPC2
OFD1
MYCBP2
HELZ
PDXDC1
FANCI
PRKAB2
CHD1L
METTL9
MAP3K13
POC5
TMED2
MEF2A
KBTBD7
CCDC15
STK4
SPAG5
ARSJ
ZMYM5
CEP63
ANAPC13
SUPT7L
SLC4A1AP
CHCHD3
ESRP1
MRPS33
EIF4A2
GCLC
ZFC3H1
THAP2
PARPBP
NUP37
UACA
ZZZ3
DDX6
SMCHD1
GTF2IRD2B
ADPGK
LOC100129484
TUT1
LRRC58
NUDCD3
RPS6
PPFIBP1
WDR33
EID1
IQCB1
EAF2
BBS7
ZNF165
SUPT5H
JOSD2
ASPDH
RPS3A
DNAJC25-GNG10
DNAJC25
GPR160
TIMM10
NUP153
SMIM10L1
PRH1-TAS2R14
B2M
TMEM249
SLC52A2
FBXL6
NMD3
RGS2
BZW2
ANKMY2
HACD3
SOX6
NAT10
SPAST
GSAP
HPS5
GTF2H1
FCHO2
PLEKHA1
C11orf58
DPF2
HSPH1
NOP14
GRK4
RAB30
FAM98B
NUP133
CDK8
FOXJ3
PLAC8
VWA2
TPH1
ROPN1B
RASA3
UQCRQ
GDF9
PDE4DIP
DMTF1
NFIB
XPO1
PBLD
HNRNPH3
KDM5B
COG6
BDH1
TFB2M
CNST
PTPN2
ARPC1B
AJUBA
ZPR1
APOA5
NDUFB4
TAS2R14
ZW10
MAD2L1
CDK17
SRI
CLTC
THEM4
MTIF3
RRP15
INKA2
ACOT4
TIAL1
C1orf74
GPAM
TTC37
ARSK
ZKSCAN2
ADAMTS7
STK35
SRSF7
CCT5
ATPSCKMT
NCSTN
COPA
ADNP
HEXA
COMMD9
ORC5
SPRED1
LIN7C
ARHGEF12
RUFY3
SERPINB1
TRIP4
GOT1
DDX20
ZNRF2
SMC5
CCNY
INTS13
FGFR1OP2
IRF3
BCL2L12
BCR