ChIP-Atlas: Target genes

Potential target genes for SOX9

Query protein: SOX9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4065344 | hESC derived retinal cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
SOX9's Target genes

◢ SOX9: Average

◢ SRX718108: hESC derived pancreatic cells

◢ SRX4065343: hESC derived retinal cells

◣ SRX4065344: hESC derived retinal cells

◢ SRX4065345: hESC derived retinal cells

◢ SRX4065346: hESC derived retinal cells

◢ SRX4065347: hESC derived retinal cells

◢ SRX4065348: hESC derived retinal cells

◢ SRX11220467: HT-29

◢ SRX11220468: HT-29

◢ SRX768290: HT-29

◢ SRX11416753: KARPAS-422

◢ SRX11856133: LNCAP

◢ SRX11856134: LNCAP

◢ SRX11856137: LNCAP

◢ SRX11856138: LNCAP

◢ SRX11856139: LNCAP

◢ SRX11856140: LNCAP

◢ SRX11856141: LNCAP

◢ SRX11856142: LNCAP

◢ SRX359919: LoVo

◢ SRX10175282: PANC-1

◢ SRX10175283: PANC-1

◢ SRX1510444: VCaP

◢ SOX9: STRING

SNX16
HBB
ARRDC4
KHSRP
WDR97
MAF1
RRM2
ZNF775
DOLPP1
TTC9B
CCNP
SPTLC2
SRGAP2C
FAM72B
TNRC6B
DUX4
ZBTB32
RNF13
MAMSTR
ARAF
FBXO5
FAM72C
HMGCS1
TEPSIN
NDUFAF8
RASSF7
LMNTD2
SRGAP2
FAM72A
HNRNPL
GTPBP6
NUCB2
H3C15
H3C14
H2AC19
H2AC18
CCNL2
ZNF8
MYH9
FAM83D
SOD2
NFYC
ACAT2
SRGAP2B
FAM72D
CIC
SLC35E2B
MTRNR2L8
BCL9L
MTRNR2L2
MSH3
DHFR
FRG2
SLC35E2A
TINAGL1
RGPD2
RGPD1
POR
C2CD4D
SNAP29
PI4KA
FRG2C
COL23A1
TAF15
GPSM3
POLG
IQCH
AAGAB
PARK7
NOXO1
GFER
MAMDC2
MTRNR2L1
SH3KBP1
PRKCI
CDC25C
PPDPF
PDXDC1
KLK6
PGBD4
EMC7
FAM53C
PPIB
EIF3B
RNASEH2A
PRDX2
OGA
GIT2
ANKRD13A
CDYL
LRRC75B
GGT1
PFDN4
MTF2
CNOT6
RHBDD3
EWSR1
PHRF1
FRAT2
AKIRIN1
LSR
ATG101
PIK3R3
EED
PTDSS1
MTERF3
SLC35A5
PCDH1
ATG3
DNAJB1
GNB2
RAB4B
MIA
PRR19
PAFAH1B3
STIP1
MYO9B
HAUS8
ATG16L2
MRPS24
SPATC1L
CDCA7L
YY1AP1
DAP3
NOTCH1
KAT7
NDST2
COMMD6
UBE2C
UIMC1
PITPNM1
TMEM160
ETV2
COX6B1
BZW2
ANKMY2
PTOV1
PMVK
KCNH8
LAMB3
UROS
BCCIP
IQCE
BRAT1
USP15
UCHL3
CENPN
SLBP
ACSS1
FOS
FRAT1
WASL
ZNF219
TMEM253
DNMT1
FLCN
SETD5
FUS
STK35
BCL6
PLEKHB1
CDON
MYH14
SHKBP1
DNAAF3
MTRNR2L9
C21orf91
TSPAN4
POLR2L
EPN1
TMEM63A
DBP
PAXIP1
UNKL
PROSER3
HSPB6
PRKDC
MCM4
ETNK1
MBLAC1
ARNTL
NOL8
CENPP
PSIP1
SELENOW
RRBP1
CNOT3
UBE2B
CDKL3
RBM7
C11orf71
RPL35
ARPC5L
PRDM10
PDE8A
LIN54
SLC25A42
ATP6V0C
SPTBN1
HHIPL1
CCDC85C
MYL12B
CNOT1
TIGD5
EEF1D
PIP4K2B
TMEM45A
IL17RB
HMX3
CHDH
FRMD5
XRRA1
SPCS2
TSKS
RPN2
MROH8
AP2A1
UFSP2
TOP2A
C4orf47
TANGO2
ARVCF
BRICD5
RNF103-CHMP3
RMND5A
FOSL1
C6orf226
COX19
TUBB4B
ULK4
MLST8
SYVN1
DGAT2
SLC5A1
CDIPT
PLEKHG4
PRKACA
MYL12A
MAGIX
PPP5D1
CALM3
MTBP
MRPL13
CCDC59
TARDBP
UBA1
RNASEK
C17orf49
ZFAND3
ZNF335
FANCI
ANP32A
TTLL7
IRF2BP2
TRAF2
PSMD14
TRAPPC6B
PNN
OXR1
ARHGEF1
PGP
SERTAD1
PSPN
ALKBH7
MRPS11
MRPL46
WWP2
SMC3
ZNHIT1
PLOD3
MSANTD4
TP53BP2
PRCP
DDIAS
PPP1R13L
POLR1G
HDAC2
RMND5B
ITGA6
RPL22
UQCRQ
GDF9
PRR3
GNL1
CFDP1
OGDH
DPP9
ADAP1
ANKRD39
ZMYM2
LUC7L2
TBC1D17
AKT1S1
SS18
CCDC9B
HDAC1
STX16
ACAP2
PMF1-BGLAP
PMF1
ABTB2
DISP3
HNRNPA1
CBX5
SP2
ZFAND4
UQCRC2
TLE3
PANK2
WRAP53
TP53
CENPE
SLA2
GTF2IRD2B
ANKRD12
TNRC18
KIF1B
TNS2
RPL19
NOCT
CACNB1
HOMEZ
CYP2R1
UCKL1
MRPS31
PLAG1
CHCHD7
TCP11L2
THOC1
ATP8A1
UBE2A
MTCH1
USP3
SSBP1
ATP5MC1
NDUFB1
CPSF2
C6orf62
KCTD2
ATP5PD
SRI
STK32C
LRRC27
ZMYM5
NR6A1
SKA2
PRR11
MYT1
LRCH4
FBXO24
PTP4A2
NCDN
KIAA0319L
VBP1
PCLAF
C7orf57
TMPRSS3
LANCL2
ZNF609
UFD1
CDC45
MAT2A
TMEM260
CNFN
PDK2
WASHC5
NSMCE2
MACC1
NWD1
UNG
ALKBH2
KMT5C
FMC1-LUC7L2
FMC1
CSNK2A1
NLK
FDFT1
ISOC2
COQ8A
BAZ1B
EFNB2
SHF
GGNBP2
HMGB1
SLX1B
SLX1A
BOLA2B
BOLA2
OSBPL2
TMTC4
USPL1
PIF1
DOHH
GTF2IRD2
CRYAA
CRYAA2
PPP6R1
MIA2
PRKAG2
C2orf42
LEMD2
ZNF300
MIA3
STXBP3
SPAAR
DAZAP2
SSNA1
ANAPC2
ZNF687
FGFR4
MEIS1
ANKHD1-EIF4EBP3
ANKHD1
KCTD7
OSBP
FARSA
CALR
FMN1
ARHGAP19
ATP5F1B
AP3S2
WDR62
THAP8
KCNAB2
PAIP2B
PELATON
HNRNPUL1
ATAD2
OTUB2
FAM110A
SELENOH
HNRNPC
ACTN1
HDGFL2
PRRC2B
CD164
HECTD2
ATF7-NPFF
ATF7
TTYH3
OPA3
UTP23
RBM42
AK2
TSKU
RASEF
TADA3
ARPC4-TTLL3
ARPC4
ZSWIM4
CCT5
ATPSCKMT
TTBK2
CANX
ZNF572
TMEM168
SMARCD2
LEPROT
LEPR
ECPAS
GATAD2B
KIAA0895
FAM227A
CBY1
RAB33B
PELI1
CABP7
ZNF574
EIF2AK3
MADD
FANCF
MGRN1
HYAL2
UTP18
MBTD1
IVD
PSPH
CCT6A
NCMAP
FAM227B
DTWD1
ATG9B
ABCB8
SPATA20
BOLA2-SMG1P6
TOM1
CFAP221
TRIP4
ATP5IF1
ING1
ARHGEF38
RABGEF1
E2F6
SF3A3
RFX1
SMARCAL1
SLC25A38
H2AZ2
CALU
INAVA
NUF2
FASN
GOT1
ZCCHC4
PRMT1
KATNB1
CSPP1
COPS5
PAK4
GIPC1
DGCR8
CDK16
LRPPRC
CYP2W1
RTKN
PNKP
EIF2D
NRARP
ASH1L
OPRL1
TES
MOCS3
DPM1
RNF6
RLN2
KMT2E
TMEM218
SREK1IP1
CWC27
G3BP1
EFR3A
ABHD2
MRPL21
IGHMBP2
YJU2
PKNOX1
LKAAEAR1
PTMA
PLPP2
TYK2
RB1
H3C6
SIPA1L2
MRPL45
LGR6
ENPP5
RBM27
PTCD3
POLR1A
YIF1A
TMEM151A
NARF
F11R
CKAP5
SIRT2
NFKBIB
SP1
ALDH4A1
ZSWIM1
CCDC102A
TFPT
PRPF31
CEP164
LRATD2
OSGIN1
NECTIN3
PPFIA3
LIN7B
C19orf73
PER1
POLR2J3
LRRC61
ACTR3C
ZNF564
PPWD1
CENPK
TTF1
PRR25
CFAP77
ITGB3BP
GGCT
EFCAB7
ECHDC2
COA1
H4C15
H4C14
ATG9A
ANKZF1
KANSL3
FER1L5
MTMR12
SRXN1
STX18
SPRYD3
PABPN1
GATAD2A
DIAPH1
DOT1L
MPHOSPH8
DCUN1D4
KLF5
FSIP1
CUL2
RUVBL2
GYS1
FAM228B
RMI1
HNRNPK
ENSA
TPBG
RAB28
KLF6
CWC25
RAB7A
PRKCZ
LSG1
KANSL1
JPT2
NUP107
CENPA
DNAJC14
HBP1
ADPGK
GTF2H2
KRT15
HSCB
CHEK2
NBEAL2
DYNLL1
NDUFS3
KBTBD4
CCNB2
EGR2
WDR45
TOM1L2
DRC3
PHPT1
MAMDC4
DIAPH3
ATP5F1E
TMEM209
SSMEM1
LINGO1
IFT52
PDIA4
ANLN
RLN1
CDKN3
PLEKHG5
P4HB
FCHSD2
MTMR14
EIF3F
TMEM242
SLC24A1
SEPTIN9
SAP30L
PACSIN2
INTS14
CDK5RAP2
PTCD2
PRR12
MRPS27
KANSL2
AFF1
ZNF484
XPA
PPP2R5A
CNPY3
ETV4
PRR14
SUPT20H
GNG3
BSCL2
SORT1
RAB40B
MZT1
BORA
C1orf198
ZNF143
CHCHD6
SC5D
FRMD6
BCAS3
SDF2L1
LIPE
SPSB3
HRC
CCDC12
TOMM40
PPP6R3
AAR2
FBXO33
ZSCAN22
VPS37B
USP31
GSN
PRDX1
LENG1
TRIM29
PCNX3
MAP3K11
TRIP10
GPR108
COPS7B
RAVER1
ZBTB45
GTF2H2C_2
CEP63
ANAPC13
TESK2
CYTH2
RAB40C
NPL
SCAND1
ZNF862
RBM28
SRM
LDHA
RUVBL1
TDRKH
POLR3B
SLC46A3
MAPK9
NF2
HGS
ARL16
ZNF138
FAM240C
FAAP24
CEP89
NEUROG3
DENR
AKR1E2
HSPA5
FOXA2
SH3TC2
METTL3
FRYL
ETV6
SPTBN4
LMTK2
HIBADH
IER5L
ANKRD17
PLXNA3
MRPL40
HIRA
PLA2G7
SPATA17
GPATCH2
GALK2
COPS2
WASF2
RCL1
INTS12
GSTCD
CCDC200
SNX17
GLIPR1L1
EIF2B4
CAPS2
ZNF92
PAQR4
BCL2L1
TBC1D10B
MYLPF
ZNF77
RAB5B
HEXA
COMMD2
UGP2
OTUD7B
MAOA
H4C12
NAT10
CTDP1
DNM2
GOLGB1
TSPAN31
AGAP2
SIGMAR1
VPS26B
NCAPD3
RPS29
RPS19
EIF4A1
SPAG7
ARHGEF7
GTF2H2C
SPATA5L1
GATM
WDR36
UQCRH
LRRC41
FAM126A
TPRN
TMEM203
SPAG8
NDOR1
HINT2
HSP90B1
CDC42BPG
RCN2
RBM48
PEX1
NOL7
MRPL44
TATDN1
PTPN13
NDUFB9
STAT1
DRAP1
C11orf68
WDR74
RWDD1
H4-16
H2AJ
ERCC1
SHOC2
MRPS23
BBIP1
ALKBH3
NDUFS7
SRPK2
RITA1
DDX54
BICD2
GOLPH3L
ARHGEF5
DPY19L4
SLX4IP
MKKS
MED23
LYRM1
IMMP1L
ELP4
DCUN1D3
PXMP4
SKA3
SDHAF1
MRPL57
GBA
EIF1AD
BANF1
UBN1
GLYR1
MAP1LC3B
FBXO31
TTC26
EHBP1
TMEM60
PHTF2
TBL3
TARS1
PGBD2
H2BC12
H2AC12
RBBP6
PPP4R3B
RNF139
WDR11
LOC101927572
HMGCR
FLAD1
ALKBH6
WDR61
CCDC77
ZBTB3
OBP2B
COMMD9
RAB11B
KAT6B
ISG20
NSA2
GFM2
ZFYVE21
XRCC3
CPSF4L
ERCC5
TMCC3
GTF3C3
FAM98B
LAPTM4A
DROSHA
C5orf22
IGSF9B
DUT
STRIP1
SLC44A1
NUDT2
KIF24
MICAL2
HACD2
ZDHHC5
SETDB2
FRA10AC1
CAB39L
ARL14EP
TMEM65
RBM14-RBM4
RBM14
ZNF273
AP3M2
LRRC45
CENPX
WHAMM
STARD3
FSD2
GARS1
PCP2
RBBP5
CDK12
AP2B1
CXorf56
USP1
NOP53
UBE2I
MACO1
ESRRG
TCERG1
RPS7
GET3
CBLB
TUT1
ZNF195
PPP1R1B
PEX3
NLE1
ADAT2
TIMM50
SFXN5
TSR3
TMEM94
GNPTG
STRIP2
SASH1
MED30
LMO7
CBX8
FZD1
TMEM222
SZRD1
NFIB
MYEOV
GET4
TDRD7
AGFG2
RUNX1
ZNF212
SLC35B4
NADSYN1
MRM3
GLOD4
DHCR7
CLDN3
TTC23L
VDR
SF3B6
RTTN
MTIF2
CCNI
NDUFB2
KPNB1
FAM20B
TPST1
PGAP2
RGMB
LFNG
HLTF
ZNF165
MSH2
GJD3
SPNS1
SLC11A2
FFAR4
ERV3-1-ZNF117
ERV3-1
EFNA4
RECQL
GOLT1B
FAM133B
USP48
TPCN1
NQO1
HAGH
FAHD1
ZNF180
CLTC
OPRD1
RPL37
ZNF830
CCT6B
XKR8
LRRC6
AMACR
RPL13A
SSR3
MAN1A2
FAR1