ChIP-Atlas: Target genes

Potential target genes for SOX9

Query protein: SOX9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX13867217 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX9's Target genes

◢ SOX9: Average

◢ SRX718108: hESC derived pancreatic cells

◢ SRX4065343: hESC derived retinal cells

◢ SRX4065344: hESC derived retinal cells

◢ SRX4065345: hESC derived retinal cells

◢ SRX4065346: hESC derived retinal cells

◢ SRX4065347: hESC derived retinal cells

◢ SRX4065348: hESC derived retinal cells

◢ SRX11220467: HT-29

◢ SRX11220468: HT-29

◢ SRX768290: HT-29

◢ SRX11416753: KARPAS-422

◢ SRX11856133: LNCAP

◢ SRX11856134: LNCAP

◢ SRX11856137: LNCAP

◢ SRX11856138: LNCAP

◢ SRX11856139: LNCAP

◢ SRX11856140: LNCAP

◢ SRX11856141: LNCAP

◢ SRX11856142: LNCAP

◢ SRX359919: LoVo

◢ SRX13867212: MCF-7

◢ SRX13867213: MCF-7

◢ SRX13867216: MCF-7

◣ SRX13867217: MCF-7

◢ SRX10175282: PANC-1

◢ SRX10175283: PANC-1

◢ SRX1510444: VCaP

◢ SOX9: STRING

ZNF217
FRG2C
PLEKHB1
PDE6A
SMARCD2
FAM102A
DGLUCY
MYH14
LRATD2
LMF1
CNP
FAM227B
DTWD1
WWOX
PPDPF
CLDN12
KANK1
PFDN4
OTOGL
PAQR4
ANP32B
VTCN1
SLC35B2
SMIM35
MTF2
RUBCNL
MTSS2
UXS1
ARHGEF1
DUSP6
LAD1
VPS37B
RDH12
TUBD1
RPS6KB1
TRIM37
SHROOM1
HLF
POR
MBNL1
PSMD6
PRR7
PARD6B
B3GALT2
KMT5B
STX16
TMBIM4
ZKSCAN1
PRICKLE2
RTKN
PPP2R2B
FRG2
CDK2AP1
HBP1
TMEM258
FEN1
PLCE1
RPS3
FGD5
ZNF3
CALN1
CENPP
BTBD3
ARHGAP39
TSKU
C2CD4D
PRORP
PPP2R3C
PXMP2
POLE
GPSM3
HACD3
BACE1
FMO1
SPATA13
HR
LMCD1
NCOA3
IFT46
MTMR7
DHX36
BMP7
NFE2
MAP4K5
ATL1
SLC25A24
DUX4
DCLRE1B
AP4B1
TBRG4
ZCCHC4
NIPAL4
SNX30
EMSY
ZHX3
NREP
SYT1
FAM71D
CNNM2
FAM222B
COX19
KRT15
FGD3
LAMA4
ABCA5
PTPRA
DRAP1
C11orf68
RPUSD3
COL9A1
TEX50
CDYL
CTHRC1
CNIH1
SPIRE1
BCL9L
PPP6R1
N4BP3
DPY19L4
CCDC130
TRAF4
STX18
ZNF180
PAPSS1
BTNL9
HEATR5A
CYB5R2
TMEM94
CNPY2
AQP6
TRIM2
HEXIM2
GAL3ST4
CDH26
MYADM
SLC25A10
LMNA
MEX3A
ARHGAP27
SART1
SEC14L5
USP32
IL16
NCALD
SMIM5
NOCT
GLIPR1L1
CAPS2
CIPC
ZNF609
ACOT2
RHOC
AP4E1
RIPOR3
MEF2C
KANSL3
FER1L5
PDXDC1
PLEKHG4
ZNF24
COPS6
INSC
CSDE1
RMND5B
VMP1
PTRH2
CADM1
KMT2A
LCP1
SLC33A1
RNFT1
DGKA
EPYC
ATP1B1
PCDH9
HMGB1
USPL1
E2F6
CSKMT
C11orf98
WWP1
RPH3A
MMP17
DHRS11
TMEM100
TBC1D30
TRIM50
FKBP6
NWD1
CRYM
PPFIBP2
PCDH1
KIN
ATP5F1C
ATP6V1G3
SVOPL
KRT23
EIF2D
LSMEM1
RAB8B
TNRC18
SSBP1
MAST4
MYO5C
MPP7
NRAS
PRKCD
HMG20B
SLC35E2A
EFNA4
SULF1
SLC6A9
PLA2G7
SGCE
PEG10
EML4
PMP2
UBXN2A
HDAC11
COL2A1
BSPRY
TRIM33
USP15
TMCC2
GAS7
TMEM177
NOXO1
GFER
SYT7
LRRC74A
FAM217B
PPP1R3D
SCCPDH
LRRC75B
GGT1
SLC11A2
SMC4
IFT80
KDM3A
S1PR2
CFDP1
NOL4L
CNOT6
TMEM129
TACC3
ABTB2
HOXA3
PI16
SOX6
TMEM170A
PERP
PTP4A1
FGA
DGAT1
MINAR1
SORT1
SCAF8
DCSTAMP
SNX31
ETV4
THEM4
GYG2
H3C6
MED23
C18orf21
SEC14L2
OTUD7B
EHF
WDR53
FBXO45
GTF2H4
LCE2A
STARD13
RBBP5
NME1-NME2
NME1
PLD4
INTS12
GSTCD
ASPM
ZBTB48
RPL26L1
COL9A2
HSD17B7
RPL32
SUOX
KLHL32
CP
OTOA
SLC44A1
CPM
DSC2
FGFR4
KDSR
B4GALNT1
ABCC5
UPF3A
OGA
FRMD8
INPP4B
AGR2
CHST11
PRDX1
ARL6IP1
MKRN2OS
MKRN2
ZNF787
ERO1A
ASB14
PPIB
MICAL2
FBXO32
DDR1
AFAP1L1
PDE4D
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
RSAD1
HSPA2
SELENOW
GRK5
MIDEAS
HDDC2
ST3GAL4
DCPS
LOC100505841
CFAP20
RNF103
SMIM6
SRGAP1
PIK3R1
ANK3
YLPM1
SPP1
RNF19A
CYTH1
PRUNE1
MINDY1
ACSS3
NEMF
NELFCD
VIRMA
ZNF277
DOCK4
CTNNB1
GBA
STRADA
SNORC
RGMA
DAAM1
EEF1A1
MFSD2B
FRAT1
MRPL21
IGHMBP2
TPK1
SPATA2
PRKAR2B
USP8
POC1B-GALNT4
GALNT4
NEDD4
FAM104A
C17orf80
UGT8
CABP7
LEPROT
LEPR
PPME1
C2CD3
PLEC
ARF6
ANKRD10
CDH3
GKN1
MMP16
RPS7
ITGB4
PAM16
FAM78B
RBM18
MRRF
AXIN2
USP3
CGRRF1
TEX14
RAD51C
TBXAS1
HIPK2
MRPL40
HIRA
TSTD2
NCBP1
HACL1
BTD
SLIRP
ALKBH1
PPP2R3B
NT5C3A
RPL27
TACO1
RAB4A
SORBS3
MYL12A
ARID2
DMXL2
MYL12B
HIPK1
OC90
RPL30
ATXN7
DNAJC14
BRIP1
CYP24A1
MRPS18A
BCAS4
DSTYK
NCSTN
COPA
CORO2B
TRAF1
PREX1
GPRC5D
NEK1
VGLL4
RABGEF1
MARVELD1
LTBP1
AURKAIP1
SH3YL1
ACP1
POGZ
BACH1
SLAIN1
TRIM16L
GABPB1
GPR75-ASB3
GPR75
DNAAF3
CTDSP2
BARHL1
HNRNPH1
FAT1
ABCB4
BCAS3
LIMCH1
NKX2-8
TENT5D
KLF10
RAB17
CD244
PPM1D
EFCAB2
SLC16A1
GPC3
LCK
FAM167B
COMMD2
CALU
POLR2J3
PRKAB2
CHD1L
NPIPB9
TPT1
ARL8B
CIDEC
ADAT1
SRF
NOTCH2NLA
MAPK6
KIF21A
C11orf91
TRIM74
TRIM73
CPLX2
ATP2B1
AKR1E2
DECR1
PEMT
RHOJ
TBC1D31
ATP5MC2
MAD2L1BP
GTPBP2
CLUAP1
AMOT
RNF144A
OPA1
DRG2
HAO1
GNAS
THAP12
GVQW3
ZNF444
PRKCI
MRPS31
NUDT2
S100A13
NACA
BPTF
FAM207A
S100A1
BTN3A1
RAB33B
SRSF7
MED9
C10orf67
SPAG1
LTBP2
WDR11
TIAL1
CEP85L
IFNAR2
BFAR
RNASEH2A
PRDX2
PRKDC
MCM4
SRRT
TADA1
MAFF
AMOTL1
DYNC2I1
ZC3H3
MYBL2
IDI2
EIF3E
FYN
EFNA1
RTL9
PRTFDC1
MGRN1
CLTC
TSPAN14
MAP2
TECTB
DKC1
ZNF775
LRRC37A3
ZNF488
MMACHC
CCDC163
CCAR1
SPTBN1
CDIPT
OTUD6B
NANOS2
ARHGAP19
SPRYD3
METTL15
KIF18A
NPC1
PARP1
MAP7D3
PELI1
SMG8
SLC39A6
TRNT1
ZFHX3
HUS1
HERPUD2
HK2
GNB2
KRT8
ELF1
SPATA9
RHOBTB3
NDUFAB1
C5orf15
WIZ
VAPB
RBM4B
TEN1
ACOX1
PEX3
ADAT2
BRWD1
GTF2H2
GTF2H2C_2
FZD1
POLR3E
TPM4
NBEAL2
CCDC12
NSFL1C
RHOT2
UBE3C
TBC1D12
DCUN1D1
DENND2C
MRPL44
RBBP8NL
VCPKMT
CCDC146
OAZ3
MRPL9
ITPK1
RMDN1
ETNK1
NOL11
COPS4
CLDN4
CDK5RAP3
ATP10B
CBX1
GNS
POMT2
GSTZ1
STAP1
CYB561
COBLL1
MRGPRX3
RHPN1
LOC100129484
GSTA4
PFKFB4
RASAL2
SLC35B1
MRGPRX4
IL25
CMTM5
CARM1
MAT2A
NOTCH2
BBS1
CYP19A1
LOC100421372
HSPA14
CDNF
SLC24A1
INTS14
NHP2
MAZ
ZNHIT1
PLOD3
CNFN
SEPTIN9
MBNL2
EIF2S1
ATP6V1D
MTCH1
FAM114A1
VEZT
FGD6
FIBIN
PDLIM7
R3HCC1
ITGB1
TJP3
RMND1
ARMT1
RTBDN
MAST1
HDGFL1
CPPED1
PTDSS1
MTERF3
ANKRD39
SIRT2
NFKBIB
EIF1AD
BANF1
MLEC
KCTD5
SRFBP1
RNF24
TRPM8
TEX53
TINAGL1
MRPS23
CHD6
SPRING1
RNFT2
PAFAH1B2
KLHL21
DUSP14
CALCOCO1
FAM222A
FLYWCH1
ZNF56
CYP26B1
BMX
AMFR
KRT72
RAB4B
MIA
GTPBP10
MALSU1
OSGIN2
GAS2L3
RGR
LRIT1
FBXW7
SERPINA3
PPP5D1
CALM3
UGP2
NDUFV1
PLP1
ZNF595
MAPK1IP1L
INKA2
DCP1A
DDX20
LTA4H
APP
SMARCD1
SORBS2
SLC6A14
ABCA10
TPD52L1
RNF103-CHMP3
RMND5A
ZBTB3
PDE4DIP
RBBP6
ATXN7L2
LEO1
RIPK2
IMMP2L
GMFB
MAML2
BCAS2
NAT8
GLIPR1L2
SS18L1
PSMA7
PLEKHF2
DCAF10
POLR2H
NAA35
WDR87
SIPA1L3
THOP1
SGTA
GDF10
CHAMP1
LYSMD2
DDX41
FKBP5
CDK13
GPR158
RRM2B
ZC3H15
KIAA2013
ACTR10
FAHD2B
RBM48
PEX1
PIK3C2B
APC
DDAH1
PRSS54
YIPF2
TIMM29
PREP
OR2A1
CCN1
ATP5F1E
TMEM60
PHTF2
ZC3H6
CRCP
SQLE
SND1
ADCK5
LRP12
APOD
ELAPOR2
GRHL2
C1orf127
CALD1
SLC27A2
TBX2
TOMM20L
ZFAND3
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
ZNF572
SULT1A4
SULT1A3
UBFD1
EARS2
SEMA3D
ACLY
TMEM163
TRAPPC6B
PNN
EEA1
TMUB2
BMI1
EXTL1
PAMR1
AP3S2
METTL9
ARID1A
DHRS13
PHLDA1
PCBP2
EEF2K
TMC2
KRT6B
SNCAIP
PACSIN2
SNAPC3
CENPN
ADGRL1
EXD2
GOLGA5
VWA1
KIF14
HPS6
FCER1G
LRRC10B
CTDP1
NPAS4
SCRIB
ARHGAP18
ARPP19
ATP6V0E1
WIPI1
HEBP2
PRSS8
ATP6V0C
ATAD2
FAM228B
GTF2H2C
SF3B6
CLIP2
STYXL1
NDUFAF6
INCENP
ERICH6
KDM5B
VGF
CPEB1
MAX
C20orf27
RAF1
FSTL4
CCDC59
MRPS18C
HELQ
SAP30BP
RECQL5
TSPAN17
ANKRD36
VEPH1
UCMA
MOCOS
INSYN2B
ATN1
UIMC1
DPP9
NBN
MEMO1
ZNRF3
ZNF410
FBXO34
FLI1
GDPD1
PSAP
ASAP2
TRIM51
ZMYM5
EEF1AKNMT
ZNF764
EEPD1
KRT3
TMEM102
FGF11
BAMBI
RAB30
TBC1D19
POP7
AMZ2
ZCCHC8
UNC50
COA5
MUS81
CFL1
PTGR2
HAPLN1
EPB41L2
TMEM150A
VASH1
LZTS2
TMEM144
MBTPS1
WWP2
B4GALT7
SNX17
EIF2B4
USP30
ARHGEF19
MKLN1
ADAMTS9
YTHDC1
KRTAP9-9
KRTAP9-8
KRTAP9-3
FLT1
CCDC134
C8B
XRRA1
SPCS2
CROT
COX16
EHD1
PCMTD1
SMAD5
GTPBP3
ANO8
KRI1
CDKN2D
RAPGEF4
WDR24
IQCH
AAGAB
LSG1
UBC
RRAGC
ESRP1
MCMBP
SRSF1
DDX59
YOD1
PFKFB2
HS6ST1
SLC34A2
ITGA6
DENR
TEDC1
CRIP1
ARFGEF2
AMN1
TOP1
UBB
RSPO4
PRELID3B
RPS29
SLC39A13
CAMSAP2
SAR1A
ATXN2L
KIAA0232
ATP5MPL
GFRA1
DUSP23
MROH1
LDOC1
GNB5
TMEM108
SLC25A3
ATG16L2
PLPP2
NUP107
CHCHD3
SPPL2B
LSM7
CCDC57
NFATC2
RSRP1
MBL2
NRM
SELENOH
RWDD1
KIF22
FGFBP3
PON2
KMT2D
ZHX1-C8orf76
ZHX1
VAX1
SLC37A4
PKD1
AZIN1
CALCR
CHST15
MARS2
SLC25A11
RNF167
GOT1
ADRM1
NOTCH2NLC
ADAM22
TNPO1
AASDH
SF3B2
GAL3ST3
FUT1