ChIP-Atlas: Target genes

Potential target genes for SOX9

Query protein: SOX9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX13867216 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX9's Target genes

◢ SOX9: Average

◢ SRX718108: hESC derived pancreatic cells

◢ SRX4065343: hESC derived retinal cells

◢ SRX4065344: hESC derived retinal cells

◢ SRX4065345: hESC derived retinal cells

◢ SRX4065346: hESC derived retinal cells

◢ SRX4065347: hESC derived retinal cells

◢ SRX4065348: hESC derived retinal cells

◢ SRX11220467: HT-29

◢ SRX11220468: HT-29

◢ SRX768290: HT-29

◢ SRX11416753: KARPAS-422

◢ SRX11856133: LNCAP

◢ SRX11856134: LNCAP

◢ SRX11856137: LNCAP

◢ SRX11856138: LNCAP

◢ SRX11856139: LNCAP

◢ SRX11856140: LNCAP

◢ SRX11856141: LNCAP

◢ SRX11856142: LNCAP

◢ SRX359919: LoVo

◢ SRX13867212: MCF-7

◢ SRX13867213: MCF-7

◣ SRX13867216: MCF-7

◢ SRX13867217: MCF-7

◢ SRX10175282: PANC-1

◢ SRX10175283: PANC-1

◢ SRX1510444: VCaP

◢ SOX9: STRING

FRG2C
FAM102A
SMARCD2
PLEKHB1
MYH14
LMF1
ZNF217
WWOX
LAD1
FAM227B
DTWD1
LRATD2
PDE6A
PPDPF
DGLUCY
CNP
ANP32B
KMT5B
KANK1
CLDN12
TRIM37
BACE1
SMIM35
CENPP
HBP1
VTCN1
MTF2
SHROOM1
TUBD1
RPS6KB1
NCOA3
STX16
PAQR4
OTOGL
PI16
ARHGEF1
VPS37B
DPY19L4
MTSS2
ZNF3
IFT46
RUBCNL
PSMD6
CYB5R2
GPSM3
COX19
B3GALT2
FRG2
HLF
RDH12
LRRC74A
EPYC
CDYL
PLCE1
DHX36
MBNL1
PXMP2
POLE
ZKSCAN1
SLC25A10
C2CD4D
NIPAL4
HACD3
PRICKLE2
CADM1
H3C6
PTPRA
ZNF24
MICAL2
BMP7
CDK2AP1
PAPSS1
SLC33A1
PPP2R2B
BCL9L
PPP6R1
DUX4
TMEM100
HR
EIF2D
NCALD
COPS6
MRPS18A
SLC35B2
UXS1
PLEKHG4
DUSP6
PARD6B
ATP1B1
SPATA13
NFE2
HOXA3
MTMR7
FMO1
SEC14L5
RTKN
RPUSD3
DYNC1H1
POLR3E
RPH3A
DCLRE1B
AP4B1
ZCCHC4
MPP7
KANSL3
FER1L5
PRR7
FGD5
FAM222B
TRAF4
HMGB1
USPL1
MAP4K5
ATL1
LSMEM1
HDAC11
KRT23
EML4
KIN
ATP5F1C
PFDN4
COL2A1
SH3YL1
ACP1
NOXO1
GFER
RPS3
SNORC
COL9A2
C18orf21
SEC14L2
ZNF180
OC90
IL16
MYADM
TSKU
PRDX1
GBA
PRORP
PPP2R3C
USP32
CTHRC1
GAS7
USP8
E2F6
TBRG4
EHF
TMEM258
FEN1
CNPY2
SYT1
GAL3ST4
RIPOR3
CNIH1
NREP
NOL4L
PRKAB2
CHD1L
PALB2
DCTN5
MAPK1IP1L
SCAF8
SPIRE1
COL9A1
PMP2
ADGRL1
EMSY
ADAM22
LMCD1
STARD13
FAM78B
N4BP3
RAB8B
SNX30
GABPB1
MMP17
CLTC
KRT15
RHOC
PLA2G7
ATP6V1G3
LRRC37A3
EIF1AD
BANF1
HEATR5A
MARVELD1
OTUD7B
THEM4
OTUD6B
RTL9
SLC25A24
HIPK1
ZNHIT1
PLOD3
HEXIM2
BRIP1
PPP2R3B
TMEM170A
UBXN2A
MINAR1
CYP19A1
TRIM50
FKBP6
DNAJC14
ARF6
CABP7
EFNA4
SRGAP1
TMCC2
CRCP
PDE8A
MRPS23
PLD4
INO80C
FRAT1
ZNF787
CCP110
CNNM2
RNFT1
TEX50
BCAS4
TPM4
EIF3E
AP4E1
DCSTAMP
DSTYK
HSPA2
GRK5
RGMA
INTS12
GSTCD
FAM71D
RGR
LRIT1
ITPK1
APP
ZNF609
HAO1
TSTD2
NCBP1
SMIM6
AXIN2
TADA1
ABTB2
ARHGAP19
TMBIM4
CCDC130
YLPM1
RTBDN
MAST1
HES1
STEAP2
STRADA
NUP107
BTBD3
ZHX3
PDXDC1
ATP11A
S100A13
S100A1
SMC4
IFT80
SOX6
LRP12
GAPDH
GLIPR1L1
CAPS2
PPM1D
ZNF775
ARHGAP18
LRRC75B
GGT1
ARID2
CUEDC1
ATP6V0A2
POR
PEX3
ADAT2
LMNA
MEX3A
TSPAN14
VAX1
SULF1
TBC1D30
EFCAB2
SART1
FGA
BCHE
CORO2B
RAC1
MYBL2
CFDP1
VMP1
PTRH2
CALN1
C11orf91
MAFF
MCM7
AP4M1
TNRC18
FBXO32
GYG2
MIDEAS
KMT2A
SLC16A1
NEMF
RPL26L1
PERP
CSDE1
ARHGAP39
OPA1
SYT7
PDE4DIP
CYTH1
UGT8
SORT1
SLC11A2
NWD1
COX16
PPME1
C2CD3
KLHL32
RAB17
TMEM177
SPP1
PRSS54
TINAGL1
SPTBN1
FGD4
C5orf15
PLPP2
SPRING1
RNFT2
CAPS
DAAM1
APPBP2
MRPS31
CEP85L
SCCPDH
CXCR4
DNAAF3
HSD17B7
SVOPL
ERO1A
FAM222A
NKX2-8
PCDH9
SMIM5
AMOTL1
RPL27
METTL9
ELF1
GPR158
CSKMT
C11orf98
ACOT2
PRELID3A
MAN2A2
INPP4B
ENPP2
CLRN1
POC1B-GALNT4
GALNT4
MKRN2OS
MKRN2
HMG20B
PDZRN3
SRSF7
PIK3R1
HDGFL1
ANKRD39
RSAD1
SF3B2
GAL3ST3
BTNL9
DHRS11
SLA2
LYRM1
DCUN1D3
DOCK8
NEDD4
MEF2C
ZNF296
GEMIN7
USP3
DGKA
FGFR4
SMARCD1
ADRM1
RHCE
FZD1
TMEM41A
PTP4A1
FUT10
B4GALT7
FRMD8
SRF
NRAS
ZSCAN32
ZNF174
NPIPB9
RPL32
GIP
MYO5C
PRPF18
TRIM74
TRIM73
CTBP2
DICER1
PKM
CRBN
SORBS2
VEPH1
ERN1
MED12L
NPAS4
DECR1
LAMA4
FLI1
ZBTB48
MAD2L1BP
GTPBP2
PCDH1
NSA2
GFM2
PLEC
PCMTD1
FAM114A1
BMX
APOD
GFRA1
SQLE
FAM104A
C17orf80
DNAI2
RMND5B
USP15
PRKCD
CD244
DRAP1
C11orf68
PACSIN2
DDR1
KDSR
CAMSAP2
LOC100129484
SLC39A13
KIF21A
IFNAR2
SGCE
PEG10
ELAPOR2
INCENP
USP30
DRG2
SLC39A6
AFAP1L1
DTX3
ARHGEF25
MRPL21
IGHMBP2
TRIM2
TRIB1
PTGR2
SLC2A12
UCHL5
RO60
STRBP
OSGIN2
SEMA3D
BCAS3
CTNNB1
CGRRF1
CPEB1
MAST4
H2BC12
H2AC12
NSFL1C
GPR75-ASB3
GPR75
PSMC6
GNAS
AMZ2
TMPRSS7
SERPINA3
RAPGEF4
MAP3K13
KIF22
GPRC5D
ZNRF3
KRT8
C1orf127
RAB4B
MIA
VCPKMT
FGD3
CP
MRGPRX4
PKMYT1
MBP
COL23A1
TES
MRPL44
PPFIBP2
CDH26
POGZ
HAPLN2
BMP8B
STX18
INSC
PYGL
DCPS
TRIM33
CDH3
CIDEC
C3orf70
PWP2
LOC102724159
LEPROT
LEPR
NOTCH2NLC
ACOT4
NDUFAF6
ZNF488
RBBP5
RAB11B
CHD6
PLOD2
FAHD2A
NELFCD
HAPLN1
RNF19A
CHAC2
SLC25A25
NAIF1
TACO1
RPL30
FDFT1
NOL11
SS18L1
PSMA7
PLEKHF2
ATP6V0E1
SDK1
GTF2IRD2B
SLC44A1
ANK3
SPATA2
GNB2
NUDT2
TPT1
BCAP29
ATP10B
PHACTR3
PLAC8
EPB41L2
MAT2A
WDR11
PIK3C2B
TMC8
TMC6
CNOT6
CDK12
MRPL42
AQP6
CPPED1
ITGB3BP
EFCAB7
ADNP
RP9
TBXAS1
HIPK2
MAP2
RBBP8NL
AURKAIP1
SRRT
CCDC88A
CLUAP1
CALCR
IQSEC3
ARL14EP
MBNL2
CSTF1
AURKA
AGR2
UCMA
FAM214A
RAB5B
NAA35
TUBG1
RETREG3
ZNF697
CLDN9
LOC100421372
HSPA14
CDNF
GRAMD1A
CA2
EFNA1
ANKRD36C
GMFB
THOP1
SGTA
HTRA2
DQX1
AMFR
RABGEF1
CEP120
PHAX
TRAF1
MNX1
ELF5
USP17L20
USP17L22
RHOT2
AMOT
CALD1
ARL6IP1
ESRP1
DDX3X
UBE3C
LEO1
RGS9
VGLL4
IL25
CMTM5
SRI
STYXL1
SAR1A
TBC1D31
LIMCH1
HSPH1
RIPK2
IMMP2L
RNF103
DMXL2
EEF1A1
KLHL21
APC
TBC1D5
FAM177A1
SLC6A14
LYPD5
NBEAL2
CCDC12
HACL1
BTD
PEMT
ETNK1
MRPL40
HIRA
KDM3A
CDK5RAP3
RCBTB2
S1PR2
B4GALNT1
ERGIC1
RAB9A
TMEM94
TSC1
GFI1B
ZNF280D
SMG1
NT5C3A
SLC6A9
FBXO34
NOCT
SASH1
NCSTN
COPA
CPLX2
CRKL
ABCA10
MAN1A2
TUBGCP3
FAT1
TMEM150A
PEX16
LARGE2
EXOC5
AP5M1
UBE2I
BACH1
FAM86B1
SLC25A21
CBX1
STX6
CHST15
FUT8
PLPPR1
GBP1
ITGA6
ARHGAP27
RINT1
PSMG3
ZSCAN12
MAX
VIRMA
IREB2
IPO4
THOC3
SYTL2
ZNF48
MFSD2B
ZFHX3
RIN3
BRWD1
VAPB
ZFAND6
PRRT1B
CLIP2
SHC4
ATAD2
SUPT7L
SLC4A1AP
TSEN54
CASKIN2
GGCX
MOCOS
UBC
DMTF1
SLC25A40
DBF4
FAM160A2
CNGA4
SCG3
LGSN
MAN2C1
CCNC
RBM18
MRRF
RUFY1
PROSER1
NHLRC3
MRGPRX3
SLC13A2
SCRG1
FAM217B
NBN
PPP1R3D
ARSI
LTBP1
CCDC57
CPM
ABCC5
PRTFDC1
SLC27A2
MED23
TMEM60
PHTF2
DDX41
CDIN1
TDP2
ACOT13
TUT7
RNF103-CHMP3
RMND5A
KLF10
FUT1
FGF21
NOTCH2
ANKRD10
ORC2
NOXA1
HDDC2
TRIM9
UNKL
HUS1
PGC
GOLGA5
AMN1
ASB14
PCBD2
TENT5D
ETV4
SEPTIN9
TMEM242
PA2G4
ABCA5
FAM120B
NOTCH2NLA
SNAPC3
MAML2
NAT8
DLL1
DHRS7
SSBP1
RAB33B
ZC3H6
FKBP9
SRRM3
TAOK2
RHOJ
TECTB
FCER1G
ARHGEF37
METTL26
RABGGTA
GRAMD2B
FIBIN
CFAP410
TSPAN13
CERS5
WWP2
RPS7
SP6
ERBB3
MGAM2
SLC39A11
GPC3
CARM1
AADAT
CNFN
EIF2AK3
RHPN1
KIF14
ATXN2L
DCUN1D1
FAM136A
INPPL1
STK32C
LRRC27
TNS2
CYP51A1
TEFM
CCT2
NPTXR
KIAA2013
VASH1
ARID1A
SLC25A32
DCAF13
DHRS13
NHP2
TEX14
RAD51C
RBM4B
DCBLD1
TMEM44
DDX42
CCDC47
TIMP4
DPH7
PRUNE1
MINDY1
LCP1
BTN3A1
MYO5A
CABLES1
FYN
PNPLA8
PTPDC1
TMEM68
TGS1
CD58
TPD52L1
GABRP
CA6
TNIP2
ARHGEF28
RPS29
ZNF277
DOCK4
GSK3A
LRR1
MED9
SIDT2
LCK
FAM167B
DCAF8
CYP21A2
SPPL2A
P2RY14
PYDC5
MTAP
IFI16
AKR1E2
SEL1L
RAB30
NUFIP2
MRPS14
KDF1
U2SURP
TJP3
THAP12
GVQW3
INTS10
WDR24
GALC
RBM23
NDUFS7
ARHGEF19
TPK1
FRG1
E4F1
ADCK5
ZNF56
ZNF706
PGK2
CIC
MAP3K3
AKAP9
TBC1D12
SIKE1
KRTAP9-9
KRTAP9-8
KRTAP9-3
TENT5C
INKA2
JOSD2
ASPDH
DDX20
RRM2B
KBTBD7
ST3GAL4
ISOC1
ANTXRL
C11orf97
STAU2
PRRC2B
LSG1
DPP3
CAPRIN2
NFE2L1
NUP155
PCBP2
MEN1
SMPD3
MBL2
OMD
SAPCD2
FAM228B
SF3B6
ANKRD27
POFUT1
PLAGL2
CSRNP2
RFC2
LUC7L3
VGF
ACSS3
PRKAB1
IFT88
IVD
CLDN4
FAM207A
EIF4B
RELT
SLC25A13
RMDN1
SNX31
TMEM163
INHA
SPDYE14
SPDYE10P
UGT2B28
NUDT4B
FARP1
SPRYD3
CYP24A1
RTF2
CLPB
ARFGEF2
BMS1
CBLL1
PUF60
PTK6
GPT2
TMIGD3
CCDC117
PLXNB3
CELF2
OSBPL2
ARHGEF38
SLC24A1
INTS14
PDP1
ATP5MC2
BPTF
NUDCD1
PAXBP1
YWHAZ
ABAT
PRKAR2B
PIGM
TMUB2
LDOC1
ADGRF1
NUF2
MALSU1
MAPK6
SLIRP
ALKBH1
ANKRD40
UGDH
SLC37A4
XPC
LSM3
STEAP4
PKD1