ChIP-Atlas: Target genes

Potential target genes for SOX9

Query protein: SOX9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX11220468 | HT-29
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX9's Target genes

◢ SOX9: Average

◢ SRX718108: hESC derived pancreatic cells

◢ SRX4065343: hESC derived retinal cells

◢ SRX4065344: hESC derived retinal cells

◢ SRX4065345: hESC derived retinal cells

◢ SRX4065346: hESC derived retinal cells

◢ SRX4065347: hESC derived retinal cells

◢ SRX4065348: hESC derived retinal cells

◢ SRX11220467: HT-29

◣ SRX11220468: HT-29

◢ SRX768290: HT-29

◢ SRX11416753: KARPAS-422

◢ SRX11856133: LNCAP

◢ SRX11856134: LNCAP

◢ SRX11856137: LNCAP

◢ SRX11856138: LNCAP

◢ SRX11856139: LNCAP

◢ SRX11856140: LNCAP

◢ SRX11856141: LNCAP

◢ SRX11856142: LNCAP

◢ SRX359919: LoVo

◢ SRX13867212: MCF-7

◢ SRX13867213: MCF-7

◢ SRX13867216: MCF-7

◢ SRX13867217: MCF-7

◢ SRX10175282: PANC-1

◢ SRX10175283: PANC-1

◢ SRX1510444: VCaP

◢ SOX9: STRING

TINAGL1
BCL9L
SH3KBP1
C2CD4D
ACSS1
GPSM3
KLK6
KCNH8
NOXO1
GFER
MTF2
CDYL
PPDPF
LAMB3
CCDC9B
UNKL
SLC35A5
ATG3
RBM7
C11orf71
LRRC75B
GGT1
HMX3
PDE8A
XRRA1
SPCS2
PLEKHB1
PCDH1
TMEM63A
TP53BP2
FRG2C
NOTCH1
SNAP29
PI4KA
RTKN
NRARP
CFDP1
MYH14
PSMD14
ARHGEF1
ETNK1
DNAJB1
IL17RB
CHDH
HECTD2
LEPROT
LEPR
PLEKHG4
ECPAS
ITGA6
SPTBN1
TMEM168
RAB33B
COX19
FRMD5
MTBP
MRPL13
ZNHIT1
PLOD3
FRG2
TMPRSS3
RASEF
ZNF572
THOC1
SLC5A1
CNFN
E2F6
OTUB2
SLBP
TNS2
ADAP1
IRF2BP2
STK32C
LRRC27
ECHDC2
ATAD2
STXBP3
PPP6R1
TLE3
COL23A1
TAF15
POR
TTYH3
NBEAL2
CCDC12
RB1
OGA
GCA
IFIH1
SSBP1
USP1
POLG
PRDX1
PIP4K2B
RHBDD3
EWSR1
FMN1
PELI1
CDC42EP3
SHF
LDHA
PPP4R3B
RAB4B
MIA
KRT15
SLC35E2B
SLA2
FOXA2
RRBP1
H3C6
UQCRQ
GDF9
SLC26A8
MAPK14
COBLL1
TMEM209
SSMEM1
XKR8
PARK7
TSKU
FGFR4
KANSL3
FER1L5
EFR3A
MCIDAS
CDK12
OBP2B
ARHGEF17
ABTB2
WWP2
LSR
SEPTIN7
MIA3
SUPT20H
RAD21
GORASP2
AP3B1
IQCH
AAGAB
MRPL45
GGNBP2
LCN2
DDR1
KMT5B
PAQR4
USP3
NCMAP
SC5D
PHYHIP
UTP23
NOL7
NPL
DNAJA4
XPA
ATL3
RPL26L1
CABP7
NUF2
RUNX1
SEPSECS
PDP1
SDHC
MPZ
RNF139
KLF4
TES
STAT3
TMEM65
TNFRSF21
PBLD
HNRNPH3
ARHGEF5
SH3TC2
RGS3
NDST2
TATDN1
NDUFB9
LYPD3
PELATON
CPSF4L
LMO7
CCNI
ESCO1
RPS19
LMF1
RABGEF1
ARHGEF38
LRRC6
ZBTB38
BICD2
PPP1CB
PLA2G2E
SPATA20
ZNF862
SMARCD2
CDC5L
GNB2
UIMC1
PSMD5
ACOT4
ARHGEF7
EIF1AD
BANF1
ZMPSTE24
FAM227B
DTWD1
TACSTD2
ZNF609
SMC4
IFT80
TNRC18
MAT2A
LAMTOR5
C21orf91
PLPP2
TTC23L
IGSF10
TM2D3
LSG1
WDPCP
MDH1
KANSL2
SDHAF1
OTUD7B
MAN1A2
SPHK2
RPL18
FAM83E
SLC30A3
SKA3
MRPL57
TARS1
SHOC2
BBIP1
TSC1
GFI1B
MEF2A
WDFY2
PAK4
MACC1
SPATA5L1
GATM
PFDN4
AP3S2
HBP1
RNF169
ARID3B
HGS
ARL16
SPTBN4
EIF4G2
DNAJC24
DCDC1
ARID2
NSFL1C
ERCC6L2
PPP1R12A
MRPL33
MYL12B
HMGB1
USPL1
SLC35B4
CDC42EP5
WDR36
NANP
SFMBT1
PTDSS1
MTERF3
CYP2R1
ITGB3BP
EFCAB7
CLTC
MTIF2
ETV6
IREB2
EID1
SLC44A1
SRSF7
TBC1D30
WDR61
ZNFX1
G2E3
PRKCI
GIT2
ANKRD13A
NPNT
VMP1
PTRH2
RAB30
ZNF425
ZNF398
ZCWPW1
MEPCE
PGBD2
RNF43
GBA
FAM133B
C17orf58
COMMD6
ADNP
DDX52
C1orf74
RNF103-CHMP3
RMND5A
MRPS31
NF2
ZNF143
GSK3A
PTPN4
ZNF473
VRK3
CCS
CCDC87
RPL12
LRSAM1
ASCC1
ANAPC16
NPTN
PSMC4
PPP1R11
ORC5
WASL
CYRIB
MTERF1
ERCC5
TPP2
PTPN2
WEE1
MRPS33
CPSF6
USP15
OGDH
ACAP2
EFNA4
SSR3
MLEC
CCN2
HNRNPA2B1
CBX3
LOC101928764
SRP19
ERCC1
PLOD2
CLDND1
LIN7C
PRR19
PAFAH1B3
CDCA7L
NECTIN3
EHBP1
TIAL1
AATF
LRATD2
GLIPR1L1
CAPS2
NOL11
ZBTB45
AAR2
TRIM28
ZCCHC4
SLC24A1
INTS14
SCAND1
KLHL7
CDADC1
ZNF189
MRPL50
IRF6
GALK2
COPS2
CCDC97
DNAJC27
BTG1
SNX5
MGME1
UBE2B
CDKL3
FZD1
WDR74
TBC1D31
KLF5
BTBD10
USP47
SPTY2D1
ZNF180
UBC
CCDC200
CLN5
RPS6
PRORP
PPP2R3C
USP48
ZNF576
IRGQ
PBX3
ZNF622
KPNA4
N4BP2L1
COMMD2
TTC32
MAFG
RPL27A
CCDC15
PPP1R9B
OSER1
PPIB
IQCE
BRAT1
EIF2AK3
RCL1
SERP1
EIF2A
OTULIN
MTHFR
CLCN6
FAM200B
TBPL1
CARNMT1
DENR
NCSTN
COPA
TRMT1L
SWT1
USP53
CCDC59
PON2
TRNAU1AP
ZNF777
SLC9B1
NDUFA5
NET1
STAT1
DIAPH3
OTOF
FAM166C
MRPS24
PPP5D1
CALM3
PRKAB2
CHD1L
NREP
TRIM29
CFAP20
POLR1F
CCNH
RPS7
UBE2I
WBP1
INO80B
STYK1
SNX17
EIF2B4
MVB12A
MSL2
TMEM126B
DLG2
NMI
MANBAL
ADPGK
MAST4
TMCC3
GTPBP10
LGALS8
CEP120
PPIC
POLR2G
CDK11A
MIGA1
NDUFB4
INTS12
GSTCD
PTPN13
EFNA1
TUT1
PGM2L1
METTL26
TENT5A
SREK1
IPMK
CISD1
MYL12A
GTF2IRD2B
PRCP
DDIAS
SELENOH
CTR9
TTC13
RPS3A
ADSS2
ALDH18A1
STK38L
EIF3B
ZFAND3
PTMA
ELF1
RPL6
PTPN11
SRCAP
LOC730183
WBP4
EMSY
SREK1IP1
CWC27
CEP63
ANAPC13
ARID1A
PARP4
FAM98B
PIGF
CRIPT
SQSTM1
POLR1H
MGAT4B
PRKAR2A
KIF5B
EXOC6B
WASHC5
NSMCE2
BAZ1B
RPL22L1
CD2BP2
CHD2
STRIP2
ECT2
SNX1
CIAO2A
PLEKHA1
SMARCA5
SMC3
DNAJC14
ARL14EP
PCP2
ACYP2
STXBP2
SMIM12
AGBL3
FAM91A1
CALM2
FGFR2
POC1A
TFPT
PRPF31
SMARCAL1
PLEKHF2
GSDMD
ETFA
SOWAHC
SEPTIN10
RABGAP1
EFCAB2
SRP9
NCOA5
CNBP
HSD17B12
RPS13
RNF135
SLC35E2A
CHCHD3
PTK2
DYNLRB1
SLC39A8
OXR1
NUDT16
SERPINI1
PDCD10
SECISBP2
CEP135
EHD4
HILPDA
DOCK9
RAB10
JAG1
FNDC3A
FRAT2
PTOV1
SHKBP1
NUP107
ATF7-NPFF
ATF7
CYP51A1
MRPS18C
HELQ
ZNF644
C19orf48
DNAJC25-GNG10
DNAJC25
SPTLC1
API5
NCAPG
DCBLD2
TMEM260
STX18
MTIF3
NUP54
WDR93
PEX11A
HES6
METTL2B
MATR3
POT1
RALA
KIFAP3
RPN2
MROH8
ZNF25
COL9A3
CD55
COG7
SLC30A6
LIPG
ANAPC4
PRPF38A
ORC1
RNF32
NECTIN2
BCL6
PRR25
TTC30B
SCAF11
DIABLO
SPATA9
RHOBTB3
THAP10
LRRC49
DCAKD
MFSD14A
NMT1
RBM12
CPNE1
MSANTD4
TTC26
ITPKC
COQ8B
LDHB
SVIP
NEPRO
DPH5
XRCC5
PPP1R13L
POLR1G
TRMT2A
RANBP1
ZBTB37
FANCI
NSA2
GFM2
PPME1
C2CD3
LRRC58
UBQLN4
LAMTOR2
FZD6
PSMA1
DCT
SMYD3
C2orf49
CCZ1B
NUP42
CLDN9
DCP1B
NUB1
UROS
BCCIP
PDIA4
METTL9
TMEM222
MICU2
CCNL1
RPL5
ZDHHC24
ACTN3
CDK13
THADA
SEC22A
MAL2
CLCF1
JRKL
CCDC82
LYPLAL1
WDR75
SZT2
MED8
FBXO48
APLF
UBR7
GON7
SPACA9
AK8
PDXDC1
ATG101
TRIB1
AP2B1
ZNHIT2
FAU
IFRD1
TAF10
ABCF1
COG6
GRWD1
C4orf36
ZNF584
PRPF4
PRKN
PACRG
CDC26
FAM228B
SLC25A32
DCAF13
NUDCD1
PFN4
RTN4
ABCF2
EREG
NOP58
STX16
C6orf62
PSPH
CCT6A
PIGBOS1
PIGB
GPR160
PLD3
C19orf47
GSPT1
APBB2
UFM1
RNF6
RWDD1
VIRMA
CCNB2
GARS1
H4C12
RNF103
IKBIP
APAF1
VAC14
ELL2
MRPS18B
HLA-DMA
ARNTL
TMBIM4
MRPL40
HIRA
FAM110A
ZBTB20
MMAA
GSTO2
EEF1AKMT1
HERC1
GFM1
RAB3C
FAM76B
CEP57
INTS13
FGFR1OP2
SRSF3
FPGS
WWOX
UCHL3
UQCRC2
PCNX3
MAP3K11
PDE4DIP
RPS11
NUDCD3
XPO1
MED4
EIF4A2
TRAK2
STRADB
COPG1
EIF2AK1
SLC39A10
ZNRF2
PIBF1
DIS3
DUSP10
TRA2B
EMC2
CEP126
ANGPTL5
IGF2BP3
ZBTB11
AMN1
MARCHF9
CDK4
TBRG1
TMEM126A
CDC25C
FAM53C
WDR11
CYTH2
TMEM41A
RTTN
HSPA5
THAP5
DNAJB9
PLEKHA8
SECISBP2L
EFHC1
MET
UGDH
UBB
ZNF268
NDFIP2
DNTTIP2
ACTRT3
MYNN
SRRT
ARHGEF19
UTP3
SAP18
KRIT1
ANKIB1
TSG101
SRP14
SPRED1
MTHFD2L
MOB4
ZNF672
WDHD1
SOCS4
KCTD12
CCNG2
SPDL1
CENPN
LANCL2
MRPS23
EHF
CROT
C8orf76
FDXACB1
C11orf1
MED30
LFNG
NXF1
LOC100287896
LIPT2
DESI2
THAP6
NUP205
SHOX2
RSRC1
PDK1
PIGW
MYO19
TOMM7
DNAAF2
NHLRC2
DCLRE1A
TAGLN2
UBN2
PPM1D
ZNF764
BORCS6
UEVLD
ZC3H15
CDK8
RNF115
POLR3C
TTC8
SPAG5
STPG2
ZNF335
TMEM242
RBBP6
COX18
LINS1
ASB7
MAGOHB
RBL1
LRRK1
NAT10
FAM3C
MTMR6
SLC25A28
SYS1
ARNT
GSK3B
C15orf40
TBC1D23
ZHX2
PTRHD1
CENPO
PAK1IP1
C6orf52
MRPL17
LACC1
CCDC122
SDCBP
HJURP
RBM28
GGCT
SEC31A
FBXO22
TNPO1
WDR27
C6orf120
H3C3
H2BC3
GMCL1
AFTPH
SYVN1
ABHD2
OPA1
JOSD2
ASPDH
ZNF264
CDKN2C
ARPC1B
ACAD9
ZFYVE27
ZNF215
STK35
CCDC146
PPFIBP1
TCF12
TP53INP2
ZSCAN31
ZNF384
CTSV
MPC2
DCAF6
PLAG1
CHCHD7
TMEM258
FEN1
USP8
AHCYL2
GADD45A
PAXBP1
METTL18
C1orf112
ING3
C11orf65
IL4I1
SYNRG
MITD1
TMBIM6
TRMO
FNDC3B
UGGT2
RPL24
CLDN3
HSCB
CHEK2
ZNF627
CCDC91
TSC22D2
ANAPC10
ABCE1
ZNF438
SAMD12
ST7L
SCYL2
DEPDC4
CAPZA1
SETDB2
CAB39L
HSPH1
FGFBP3
ESYT2
NAGK
POLR2H
WDR33
GORAB
TC2N
PLK2
COX5B
CLCN2
TOE1
MUTYH
USP45
PRELID2
RHOB
ZNF3
H4C15
H4C14
POLR3B
RPL37
PSMD3
CRYBG1
TRAF7
PLSCR1
CRNKL1
CFAP61
MSANTD2
FNBP4
DDX6
NBEAL1
TFG
RPS3
MAPK1IP1L
BBS9
HNRNPA0
MRPL48
MFAP3
FAM114A2
POMP
HSPA6