ChIP-Atlas: Target genes

Potential target genes for Sox9

Query protein: Sox9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: DRX028798 | Embryonic limb
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Sox9's Target genes

◢ Sox9: Average

◢ SRX4554102: 3T3-L1

◢ SRX1271841: Atrioventicular canals

◢ SRX1035108: Chondrocytes

◢ DRX028800: Embryonic gonad

◣ DRX028798: Embryonic limb

◢ SRX1271842: Embryonic limb

◢ SRX1035119: Embryonic nose

◢ SRX1769357: Embryonic testis

◢ SRX1769358: Embryonic testis

◢ SRX450830: Epidermis

◢ SRX19952385: Gq-CNO

◢ SRX450826: Hair follicle stem cells

◢ SRX450828: Hair follicle stem cells

◢ SRX2208544: Intestinal stem cells

◢ SRX2208545: Intestinal stem cells

◢ SRX104231: Limbs and tails

◢ SRX15046886: MEF

◢ SRX15046887: MEF

◢ SRX4496821: mESC derived glial cells

◢ SRX4496822: mESC derived glial cells

◢ SRX4496823: mESC derived glial cells

◢ SRX130589: Neural tube

◢ DRX138318: Submandibular Gland

◢ SRX1023381: Unclassified

◢ SRX15441804: Unclassified

◢ SRX15441805: Unclassified

◢ SRX15441806: Unclassified

◢ SRX19952382: Unclassified

◢ SRX19952387: Unclassified

◢ SRX19952389: Unclassified

◢ Sox9: STRING

Tcstv3
Cldn34d
Brox
Aida
Rtn3
Gnai2
Inip
Flcn
Uqcrh
Lrrc41
Oga
Tjp3
Pip5k1c
Fam53c
Cln8
Gipc1
Aldh4a1
T2
Eed
Arntl
Cmc2
Cenpn
Phrf1
Cdk12
Nphp4
Kcnab2
Uchl3
Rita1
Ddx54
Ptcd3
Polr1a
Cenpe
Ptov1
Eif3b
Tcp11l2
Lrpprc
Nmral1
Med30
Rpl19
Cacnb1
Ephb2
Calm3
Taf15
Septin11
Madd
Wdr77
Atp5pb
Trir
Get3
Denr
Cnot6
Srek1ip1
Cwc27
Mrps11
Mrpl46
Por
Arid4a
Samd4b
Gmfg
Cdiptos
Cdipt
Robo1
Ppp1r13l
Cd3eap
Tbck
Aimp1
Rab28
Mlst8
Tst
Mpst
BC005537
Top2a
Bzw2
Ankmy2
Sh3glb2
Miga2
C1d
Nr6a1
Tada3
Arpc4
Lsg1
Prkdc
Mcm4
Rpl22
Hyal2
Aspn
Myh14
Gnb2
Gpsm1
Dgat2
Eif2ak3
Sash1
Pfdn4
Ift27
Arrdc4
Prkci
Ttll7
Slbp
Cdca7l
Galnt10
Mia2
Ott
Gm15107
Gm15085
Pkia
Tigd5
Eef1d
Dolpp1
Tbc1d17
Akt1s1
Asah1
Qrich1
Limch1
Fam227a
Cby1
Smc3
Zfp821
Mapk8ip1
Tmem260
Uros
Bccip
Camta1
Utp18
Mbtd1
Zfp383
Zfp27
Ndufb1
Cpsf2
Apobec2
Psip1
Pawr
Rnasek
0610010K14Rik
Zfp687
Git2
Ankrd13a
A330070K13Rik
Fus
Cnot11
Atg12
Ap3s1
Paxip1
Dpp9
Cdt1
Sos2
Sema4d
Otogl
Abhd2
Wasf1
Cdc40
Mblac1
Sharpin
Maf1
Gm35339
Rhbdd3
Ewsr1
Fsbp
Rarg
Srpk2
Slc41a3
Ankrd54
Ptcd2
Mrps27
Frat2
Tmem198b
Dnajc14
Krt80
Nol6
Pabpc4
Uchl1
Hrc
Cct5
Atpsckmt
Prrt1
Ppt2
Frat1
Hap1
Oxr1
Cryge
Fgd4
Selenow
Zswim4
Psma8
Mat2a
Slc36a4
Dohh
Cibar2
Mbnl2
Rmnd5a
Atg101
Noct
Atrnl1
Pknox1
Gripap1
Iqch
Aagab
Atp8a1
Mgrn1
Pik3r3
Raly
Tspan4
Polr2l
Jun
Junb
Rlim
Hs3st3a1
Pias2
Prr19
Pafah1b3
Them6
Myo18a
Ces2a
Ilf2
Tcerg1
Uqcrq
Gdf9
Smg8
Tll1
Cnot1
Fanci
Hexim1
Tnrc6b
Aicda
Dut
Zfp526
Dedd2
Oxgr1
Prdm10
Hdac2
Dnmt1
Lrch4
Fbxo24
Uba1
Bzw1
6030468B19Rik
Sele
Paip2b
Map3k7
Ptdss1
Mterf3
Rel
Atp5b
Zfat
Map7d1
Cfap77
Ttf1
Mis12
Derl2
Papss2
Inava
Spsb3
Nubp2
Trip10
Gpr108
Nectin3
Siah3
Stip1
Ube2c
Ltbp4
Kctd2
Atp5h
Cd164
Kctd14
Mtch2
Rtkn
Hnrnpc
Cdca8
9930104L06Rik
Cdc25c
Gm6729
Slc35g3
Polr2a
Sp2
Zfp94
Pcdhgc3
Pcdhgc4
Dnm2
Rbbp9
Avpi1
Traf2
Tepsin
Ndufaf8
Eif4a3
Ppm1l
Ly6g6f
Abhd16a
Rbm39
Papln
Arhgef1
H2-DMa
Brd2
Nol8
Cenpp
Wasl
Xrcc1
Pinlyp
Slc35e3
Sspn
Myl12a
Smim4
Nt5dc2
Wrap53
Trp53
Nasp
Mynn
Actrt3
Sdcbp
Fchsd2
Timeless
Ccp110
Nfe2l3
Fam53b
Tpbg
Sp1
Fos
Flad1
Rnf5
Agpat1
Col9a1
Cd69
Rfx1
Cap1
Lamp5
Fbln2
Smim38
Mfsd13b
Cdr2
Ccdc33
Mtmr14
Srxn1
Ttll10
Rhobtb3
Sgsm3
Xirp1
Zpbp
Spata48
Krtap6-1
Cic
Akirin1
Katnb1
Cwc22
Paf1
Med29
Zfp869
Oat
Ccdc106
Smchd1
Zfp580
Scamp5
Hcn1
Rab11b
Krcc1
Fxyd3
Uhrf1bp1
Fbxo33
Slc39a3
Prkaca
Rusc2
Ska2
Prr11
Ensa
Atp6v0c
Psmd5
Cutal
Sel1l
Ccdc85c
Duxbl3
Duxbl2
Duxbl1
Alox5ap
Sod2
Calml3
Dbp
Car11
Dmxl1
Fbxl14
Nudt2
Kif24
Tacc1
Frem3
Rps19
Tns2
Gzmm
Srgap2
Fam72a
Lpar3
Spdl1
H2-T9
H2-T22
Gm6034
Kiss1
Mvk
Mmab
Lsm6
Rassf5
Cfap73
Olfr1419
Zfp219
Tmem253
Khsrp
Rps7
Nlk
Tmem94
Anp32e
Nek6
Pramel51
Ugp2
Rnf26
Mtf2
Dot1l
Cspp1
Cops5
Nfatc2ip
Zfp637
Timm17b
Pqbp1
Atg16l2
Smarcal1
Nfe2
Kctd9
Cdca2
Pcsk5
1110004F10Rik
Plekhf2
Usp1
Fam76a
Rbm15
Prickle1
Ccnj
Ss18
Per2
Glcci1
Gm11780
Ptch1
Il17rb
Chdh
Dgcr6
Ttc30b
Golph3l
Relch
Pign
Slc25a20
Cul2
Rap2a
Tmem102
Fgf11
Chrnb1
Rnpc3
Slit3
Ppm1k
Pnpo
Ss18l2
Abtb2
Wbp1
Ino80b
Plod2
Xylt1
Arpc1b
Wdr62
Acvr1b
Akt2
Kmt5c
Zfp608
Mtss2
Tom1
Hbp1
Fgfrl1
Inka1
Myadm
Wasf2
Slc25a25
Naif1
Iqce
Brat1
Tppp2
Ndrg2
Tmem218
Slc66a2
Prox2
Dlst
Nudcd2
Hmmr
Tcf12
Dusp12
Wipf1
Mrps10
Tmprss3
Krt19
Ift140
Cramp1l
Rnaseh2a
Prdx2
Tctn2
Dhrs3
Zfand3
Ccdc187
Ubr3
Maco1
Kcns1
Meis1
Calcoco1
Med25
Fuz
A930018P22Rik
Hnrnpr
Kdm4a
Ccer1
Gpr84
Fzd2
Pip4k2b
Evi5l
Polg
Magel2
Sema3b
Pmpcb
Neo1
Erbb3
Rbm5
Ssrp1
P2rx3
Ezh2
Trim8
Ddx41
Nacc2
3110082I17Rik
Tcf19
Cchcr1
Immp1l
Elp4
Ivd
Arap1
Olfr812
Mag
Grm1
Cct8l1
Copz1
Rpn2
Mroh8
Tle3
Bsdc1
Cdc23
Ctps
Fhad1
Crtap
Spag9
Ap2m1
Psma2
Mrpl32
Dus1l
Mycbpap
Scnn1g
Ireb2
Stau2
Zfp607b
Znhit3
Snrpd3
Gucd1
Rspry1
Psme3ip1
Scyl3
Rp1
Map3k3
Kmt2a
Hspa4
Ubald2
Zfp52
Mapk14
Slc26a8
Dap3
Zbtb3
Polr2g
Syt8
Nckap5
Pxmp4
Klhl26
Scamp2
Osbpl5
Maoa
Ankrd6
Prkcb
Prickle2
Zfp599
Fam24b
G3bp1
Tmx2
Med19
Supt5
Dcc
Slc35e2
Hdac1
Sgms1
Elmo2
Tprn
Igsf8
Cep135
Nfatc2
Tedc1
Crip1
Lars
Isoc2b
Ngdn
Spire1
Arl14epl
Anln
9530077C05Rik
Akap11
Ankhd1
Zfp574
Grik5
Hexim2
Zdhhc5
Spag8
Hint2
Erg
Tmigd1
Rbm25
Armc1
Ppp6r3
Wnt2b
Wnt10b
Folr2
Card19
H2-DMb1
Dhrs2
Lyzl1
Adamts19
Srf
Arf4
Sptlc2
Shisa5
Arhgef3
Col11a2
Ube2b
Cdkl3
Nvl
Sarnp
Ormdl2
C330007P06Rik
Lyrm7
Rraga
Ier5
Faap24
Lca5
Cemip
Kat6b
Tbcb
Polr2i
Ovol3
Ak1
Sorbs2
Nedd4
Phldb1
Arl2
Pan2
Poc5
Wdr27
1600012H06Rik
Yipf2
Timm29
Slc14a1
Siah1b
Ankfy1
Akap7
Nbdy
Diaph1
Rnf181
Zfp660
Osbp
Stat3
Ints4
Xab2
Pet100
Pcp2
Apc2
Lratd1
Cct8
Fdft1
Stt3a
Rcl1
Gpsm2
Cdc45
Heatr1
Gtpbp3
Ano8
Trim45
Fdxr
Mxd4
Dcaf15
Gjc3
Dapk3
Trappc11
Rwdd4a
Mterf2
Psat1
Wwox
Rbbp6
Atf7
Msantd4
Cemip2
Cd1d1
Ctla4
Gtf2b
Got1
Rpl27
Tars
Ticrr
P4hb
Mon1b
Hip1
Tomm40
Timm10
Smtnl1
Veph1
Glrx5
Gcdh
Srp68
Lrrc71
Ric8b
Fut4
Mfsd8
Rpp38
Acbd7
Traf7
Cthrc1
Psmb3
Pcgf2
Nmt1
Mospd3
Chgb
Npm1
Arhgap11a
Arf2
Ppm1b
Zfp317
Islr
Pin1
Ap2a1
Sfpq
Tex14
Chmp3
Myd88
Acaa1a
Zfyve21
Xrcc3
Fam76b
Cep57
Abhd18
Rab40c
Mest
Limd1
Alyref2
Zbtb40
Kpna1
Tmem125
Il31ra
Jag2
Asmt
Cenpu
Olfr806
Abhd6
Ndst2
Eapp
Cbr3
Bcl6
Itgb4
Oasl1
Zfp143
Rps29
Vmn2r102
Cltc
Ajuba
Fam20b
Rps27l
Sec14l1
Xpc
Lsm3
Pa2g4
Proser1
Nhlrc3
Srsf7
Hjurp
A730008H23Rik
Smg9
Nemf
Znhit1
Plod3
Lrrc56
Hras
Rab5b
Crebzf
Tmem41b
Taf12
Fam227b
Dtwd1
Phlda3
Tmem250-ps
Gm5165
H3c15
H3c14
H2ac19
H2ac18
Rab33b
Tjp2
Ap3m2
Dnajc16
Casp9
Mmp15
Susd6
Pole3
Gm3448
Gm3417
Alad
4933430I17Rik
Yif1b
Trappc9
Ctnnb1
Bcl9l
Nme1
Ubr4
Get4
Slc35b1
Ccser2
Gtf2a1
Uvssa
Tcte3
Slc14a2
Slc30a5
Chmp7
Zxdc
Ints10
Mrpl21
Ighmbp2
Cfap20
Frmd6
Htra2
Dqx1
Bbs2
Nt5c3
Lfng
9030025P20Rik
1700016H13Rik
Styxl1
Mdh2
Fkbp3
Fancm
Ermard
Nuf2
Mapkapk5
Gatad2a
Isy1
Smim17
Taf9
Rad17
Ak6
Angptl4
Spty2d1
Chordc1
Tob1
Birc2
Magi1
Tpt1
Mrpl30
Mitd1
Wdfy2
Utp3
Plekha1
Get1
Tecpr1
Plekhb1
Opa1
Fnbp1
Gfra4
Tmem107
Sncg
Mmrn2
Gm3435
Kremen1
Zscan25
Clic4
Tubb4b
Gramd1b
Fam149b
Ecd
Cnot3
Tcf3
Ttc14
Limk2
Txnip
Sfi1
Rgs3
Frmd4b
Faf1
Gopc
Esyt2
Oprd1
Kpnb1
Med6
Zfp24
Snrpc
Kifap3
Niban2
Palb2
Dctn5
Hmgcs1
Nabp1
Psmd3
Rps12
H4c3
H1f6
Tsga10
Actr3
Dffb
Cep104
Usp20
BC005624
Sema3f
Tmem262
Hes6
Calm1
Gtf2f1
Wdr92
Pno1
Rab4b
Mia
H3f3b
Stk32c
Aard
Cactin
Ttc41
Hsp90b1
Plekha7
Trim41
Sigmar1
Nup107
Klhl21
Prpf40a
Dgat1
Arl6ip6
Rer1
Morn1
Tfg
Ccnt2
Kansl3
Fer1l5
Iqcn
AW549877
Rps3a1
Nfat5
Zcchc14
Crtc1
Egr2
Eps15
Nup133
Srm
Aig1
Fitm2
Zfp654
Cggbp1
Cyth1
Lamp1
Bricd5
Fbxw7
Vta1
2900026A02Rik
Spink5
Spdye4b
Rbak
Gpn3
Fam216a
Pip4p1
Ist1
Evpl
Grb2
Fstl3
Bmf
Baz2a
Kpna3
Pop7
Lig4
Abhd13
Sde2
Ifna13
Gale
Arhgef4
Zfp385b
Tmco3
Dcun1d2
Rgl2
Ltbp1
Abcf2
Cipc
Supv3l1
Ube2d3
Rpl3
Gorasp2
Mef2a
Glce
Bod1l
Eif4e
Fam3c