ChIP-Atlas: Target genes

Potential target genes for Sox9

Query protein: Sox9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1271842 | Embryonic limb
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Sox9's Target genes

◢ Sox9: Average

◢ SRX4554102: 3T3-L1

◢ SRX1271841: Atrioventicular canals

◢ SRX1035108: Chondrocytes

◢ DRX028800: Embryonic gonad

◢ DRX028798: Embryonic limb

◣ SRX1271842: Embryonic limb

◢ SRX1035119: Embryonic nose

◢ SRX1769357: Embryonic testis

◢ SRX1769358: Embryonic testis

◢ SRX450830: Epidermis

◢ SRX19952385: Gq-CNO

◢ SRX450826: Hair follicle stem cells

◢ SRX450828: Hair follicle stem cells

◢ SRX2208544: Intestinal stem cells

◢ SRX2208545: Intestinal stem cells

◢ SRX104231: Limbs and tails

◢ SRX15046886: MEF

◢ SRX15046887: MEF

◢ SRX4496821: mESC derived glial cells

◢ SRX4496822: mESC derived glial cells

◢ SRX4496823: mESC derived glial cells

◢ SRX130589: Neural tube

◢ DRX138318: Submandibular Gland

◢ SRX1023381: Unclassified

◢ SRX15441804: Unclassified

◢ SRX15441805: Unclassified

◢ SRX15441806: Unclassified

◢ SRX19952382: Unclassified

◢ SRX19952387: Unclassified

◢ SRX19952389: Unclassified

◢ Sox9: STRING

Tcstv3
Cldn34d
Kpna1
T2
Gopc
Nepn
Brox
Aida
Asmt
Mia2
Il31ra
Phrf1
Oga
Dnmt1
Ptcd2
Mrps27
Prkdc
Mcm4
Rita1
Ddx54
Cd164
Tjp3
Pip5k1c
Ift27
Sod2
Oasl1
Uchl1
Mapk8ip1
H2-DMa
Brd2
Git2
Ankrd13a
Asah1
Duxbl3
Duxbl2
Duxbl1
Rpl22
Fam53c
Taf15
Tmem125
Tacc1
Wasl
Fam227a
Cby1
Akirin1
Bzw2
Ankmy2
Ccdc85c
Ptov1
Cnot6
Prox2
Dlst
Dbp
Car11
Ptcd3
Polr1a
Sash1
Ap2m1
Cmc2
Cenpn
Rarg
Tom1
Olfr806
Nphp4
Kcnab2
Paxip1
Gipc1
Dut
Rpn2
Mroh8
Calm3
Eif3b
Trip10
Gpr108
Cdiptos
Cdipt
Rusc2
Mycbpap
Tigd5
Eef1d
Pknox1
Iqce
Brat1
Septin11
Slc39a3
Vangl2
Abhd6
Cspp1
Cops5
Cln8
Fchsd2
Vmn2r102
Cdh12
Prdm10
Them6
Mrps11
Mrpl46
Aldh4a1
Spata17
Gpatch2
Atp6v0c
Atg12
Ap3s1
Dot1l
Por
Pfdn4
Cenpe
Rfx1
Madd
Lyrm1
Dcun1d3
Eed
Raly
Prr19
Pafah1b3
Flcn
Akt2
Zfp24
Diaph1
Sp2
Slc35e2
Sspn
Ifna13
Arntl
Galnt10
Uros
Bccip
Rab5b
Dpp9
Celsr3
Tepsin
Ndufaf8
Rab28
Iqch
Aagab
Zfp383
Zfp27
Myh14
Prkci
Ptdss1
Mterf3
Sharpin
Maf1
Gm35339
Timeless
Hrc
F830045P16Rik
Rpl19
Cacnb1
Foxp2
Arid4a
Rbbp6
Rnasek
0610010K14Rik
Tcp11
Ak1
Atrnl1
Fbxo33
Hdac2
Prrt1
Ppt2
Kcnn4
Zfp526
Dedd2
Apobec2
Chmp3
Paip2b
Pcdh9
Dohh
Mblac1
Gnb2
Sri
Fanci
Rbbp9
G3bp1
Arrdc4
Atg101
Oxr1
Dolpp1
Hyal2
Dgat2
Smarcal1
Uchl3
Ndufb1
Cpsf2
Arl2
Ppp1r13l
Cd3eap
Cfap77
Ttf1
Inava
Rps29
Trir
Get3
Srxn1
Mlst8
Mbnl2
Sp1
Abtb2
Kctd2
Atp5h
Mat2a
Slbp
Nmral1
Stx16
Zfp748
Map7d1
Prkag2
Papss2
Dnm2
Frat1
Cnot1
Ska2
Prr11
Flad1
Uqcrq
Gdf9
Uqcrh
Lrrc41
Gzmm
Tmem260
Traf2
Hdac1
Col9a1
Pkia
Vmn2r4
2310039H08Rik
Ly6g6f
Abhd16a
Frat2
Atp5b
Kdm6b
Hap1
Fgd4
C1qtnf6
Tada3
Arpc4
Tbc1d17
Akt1s1
Smg8
Tst
Mpst
Nfe2
Ndst2
Sema3b
Atp8a1
Tpbg
Phldb1
Srek1ip1
Cwc27
Abhd2
Atg16l2
Polg
Wasf1
Cdc40
Sox5
Apela
Bzw1
Sigmar1
Ppm1l
Hexim1
Fbh1
Ankrd16
Ankar
Tsc22d1
Csf2ra
Nol8
Cenpp
Utp18
Mbtd1
Ablim1
Fzd2
Myl12a
Limch1
Dab1
Lrpprc
Mrpl21
Ighmbp2
Dchs2
Tmem102
Fgf11
Chrnb1
Mtmr14
Cnot3
Pik3r3
Cpa5
Zfp143
Tcp11l2
Uba1
Syn1
Osbp
Zdhhc5
Selenow
Wwox
BC005537
Ankrd54
Nfatc2ip
Psip1
Rnf130
Ppp6r3
Frmd6
Cic
Dcps
Lsg1
Stt3a
Ets2
Slc35g3
Polr2a
Eif2ak3
Wasf2
Dffb
Cep104
Ttll7
Slc35e3
Elmo2
Cct5
Atpsckmt
Sema4d
Rlbp1
Zfp691
Ube2b
Cdkl3
Pip4k2b
Plekhf2
Nemf
Rtkn
Top2a
Zfp637
Proser1
Nhlrc3
Selenop
Mgrn1
Cbr3
Ogfod1
Nudt21
Tle3
Smim38
Zbtb18
Id2
Ap3m2
Sorbs2
Cdt1
Rara
Fus
Zfp574
Grik5
Chchd2
Ndufs7
Kxd1
Fkbp8
Cemip2
Tnrc6b
Noct
Adpgk
Znhit1
Plod3
Ltbp4
Rptor
Ncbp2
0610012G03Rik
Spire1
Rtkn2
Robo1
Rmnd5a
Cobll1
Cul2
Nudt2
Kif24
Ngdn
Myl12b
Tmem198b
Dnajc14
Ube2a
Mocs3
Dpm1
Cyp2u1
Clip3
Calml3
Sphk1
Smc3
Rab4b
Mia
Opa3
Ephb2
Slc4a2
Cdk5
Gpsm2
Gng3
Bscl2
Wrap53
Trp53
Irf2bp2
Tnrc18
Ncaph
Arvcf
Nf2
Scx
9230019H11Rik
Trim50
Chrm1
Zfp219
Tmem253
Glrx5
Rhobtb3
Wipf1
Nfatc1
Otogl
Col9a3
Pnmal2
Ss18l1
Psma7
Fos
Phldb2
Rab34
Proca1
Atf7
Rhbdd3
Ewsr1
Rcc2
Zfp654
Cggbp1
Pabpn1
Ppdpf
Rnf5
Agpat1
Camta1
Swsap1
Adgra2
Inka1
Fdft1
Lrrc75b
Tmem242
Npas4
Sort1
Unc13c
Efna4
Hnrnpc
Magi1
Lars
Tom1l2
Drc3
Lrch4
Fbxo24
Dcaf7
Mon1b
Med25
Fuz
Wrnip1
Mtss1
Syvn1
Rnaseh2a
Prdx2
Me1
Rab11b
Zfyve21
Xrcc3
Mapre3
Ss18
Prickle1
Arap1
Ccdc106
Zfp580
Stip1
Smim17
Cdc25c
C1d
Marcksl1
Crebrf
Pitpnm1
Cdk2ap2
Akap8l
Zmat2
Smg9
1700034J05Rik
Tns2
Cep41
Rbm5
Tex14
Kif1b
Ankfn1
Dap3
Oat
Alkbh2
Syt8
Ung
Kpnb1
Nlk
Got1
Ivd
Irf2bp1
Pmvk
Dhrs3
Plpp2
Ss18l2
Map3k3
Ankhd1
Bcl9
Ppfia3
Lin7b
Prkaa1
Slc25a25
Naif1
Bcl6
Mrpl44
Tedc1
Crip1
Evi5l
Wdr70
Rcl1
Zfp180
Pcx
Trub2
Atp5e
Igsf9b
Ccdc33
Hmgcs1
Rgmb
Gfra1
Rab8a
Nectin3
Psma8
Rhoj
Prpf40a
Arl6ip6
Fyn
Junb
S1pr2
Ypel4
Nek6
Scamp1
Ube2c
Gatad2a
Prkaca
Cdca8
9930104L06Rik
Atp5g1
Sel1l
Znhit3
Gripap1
Pdk2
B4galt7
Pcid2
Cul4a
Dok7
Maneal
Vdr
Frmd5
Zfp687
Pde6d
Cops7b
Agpat4
Sox6
Kcnk2
Mis12
Derl2
Wfikkn2
Gjb2
Pnn
Pygo2
Spag7
Tomm40
Kctd14
Khsrp
Tcf12
Tspan4
Polr2l
Arhgef40
Hnrnpl
Enah
Arhgef1
Abhd18
Mvk
Mmab
Copz1
Nol6
Ggct
Tbcb
Polr2i
Ovol3
Rplp0
Spag8
Hint2
Tpcn1
Iqcd
Tmem198
Chpf
4930558K02Rik
Pwwp2a
Ndufs4
Sin3a
Dhx30
Pacs2
Selenoh
Il25
Cmtm5
Fbxl14
Meis1
Katnb1
Tmx2
Med19
Tgfb3
Ift43
Bcl9l
Creb3l2
Per2
Stat5b
Ugdh
Plod2
Veph1
Mapk6
Gli3
Cpt1c
Cdo1
Ift140
Cramp1l
Erp27
Nynrin
Ncald
Zfp869
Mtss2
Get4
Ccser2
Tmem218
Mrpl30
Mitd1
Pin1
Mdm2
Kansl2
Gm51425
Mrpl1
Zfp513
Chadl
Nap1l4
Calcoco1
Psd
Fbxl15
Klhl20
Leprot
Agrn
Zfp101
Otub2
Tmem160
Vps50
Hepacam2
Aanat
Plxna3
Slc46a3
Hmgcll1
Pgd
Magel2
Kmt5c
Ttc41
Hsp90b1
Col9a2
Eef2
Lekr1
Erg
Gfpt1
Erf
Rab40c
Myh10
Anp32e
Taf12
Arid1a
Dynll1
Ttc30b
Dstyk
Fgfrl1
Smtn
Cdca7l
Opa1
Tmem262
Nup133
3110082I17Rik
Med23
Cyth2
Tctn2
Zswim3
Acot8
Vps51
Timm17b
Pqbp1
Ddx19b
Aars
Ankzf1
Tle2
Enpp2
Ssrp1
P2rx3
Eif5
Eapp
Slc2a1
Rgs3
Bbx
Fam110a
Tjp2
Sptlc2
Fmnl2
Tac1
Mfsd8
Phf12
Cabcoco1
Nup93
Cnn3
Plekhb1
Zswim4
Baz2a
Yipf2
Timm29
Bcas3
Gins2
Drg2
Phb
D16Ertd472e
Tomm22
Tspan33
Plin1
1700029P11Rik
Pan2
Wnk4
Ensa
Gnas
Pcdh1
Nr6a1
Kat6b
Dhx35
Art4
Dcaf11
Actg1
Angptl1
Ift81
Rtn3
Qrich1
Gm5165
Fkbp3
Fancm
Tcerg1
Palb2
Dctn5
Tma16
Rbm27
Rnf26
Srp68
Elf1
Tdrkh
Dnttip2
Mrps10
Slc26a1
Pp2d1
Bckdk
Sdsl
Sds
Inip
Ap2a1
Mro
Ptpn14
Srpk2
Tomm70a
Lancl2
Pradc1
Cct7
Gid4
Vmn1r2
Uvssa
Usf3
Mettl11b
Rel
Atxn7l2
Mrpl39
Yif1a
Tmem151a
Acsf3
Amhr2
Saxo1
Mlec
Lima1
Pwwp3a
Pnpla6
Cyth1
Fxyd3
Prrg4
Slc14a1
Nedd4
Dgcr8
Zfp335
Tatdn3
Nsl1
Slc35a3
Ermn
Kcnj16
Elavl2
Cntrl
Cdk5rap3
Tsku
Neurl2
Ctsa
Zfp646
Zfp668
Ibtk
Kmt2a
Denr
Jag2
Gnai2
Cenpu
Wdr77
Atp5pb
Itgb4
Mtf2
Cltc
Ajuba
Fam20b
Rps27l
Sec14l1
Xpc
Lsm3
Pa2g4
Hexim2
Cdk12
Rbm25
Srsf7
Hjurp
A730008H23Rik
Lrrc56
Hras
Spsb3
Nubp2
Crebzf
Tmem41b
Fam227b
Dtwd1
Phlda3
Tmem250-ps
Igsf8
H3c15
H3c14
H2ac19
H2ac18
Rab33b
Dnajc16
Casp9
Tbck
Aimp1
Mmp15
Susd6
Pole3
Gm3448
Gm3417
Alad
4933430I17Rik
Yif1b
Trappc9
Ctnnb1
Nme1
Zfp821
Ubr4
Slc35b1
Cct8
Gtf2a1
Tcte3
Slc14a2
Slc30a5
Chmp7
Zxdc
Ints10
Cfap20
Htra2
Dqx1
Stat3
Bbs2
Nt5c3
Rbm39
Lfng
9030025P20Rik
Rpl27
Ilf2
1700016H13Rik
Ints4
Styxl1
Mdh2
Ermard
Nuf2
Mapkapk5
Isy1
Taf9
Rad17
Myadm
Ak6
Angptl4
Spty2d1
Chordc1
Mtch2
Tob1
Ddx41
Birc2
Tpt1
Wdfy2
Utp3
Plekha1
Get1
Tecpr1
Fnbp1
Gfra4
Tmem107
Sncg
Mmrn2
Gm3435
Kremen1
Zscan25
Clic4
Tubb4b
Gramd1b
Fam149b
Ecd
Tcf3
Ttc14
Limk2
Zfp607b
Txnip
Sfi1
Frmd4b
Faf1
Esyt2
Oprd1
Med6
Snrpc
Kifap3
Niban2
Smim4
Nt5dc2
Nabp1
Armc1
Psmd3
Rps12
H4c3
H1f6
Tsga10
Actr3
Usp20
BC005624
Sema3f
Hes6
Calm1
Gtf2f1
Wdr92
Pno1
Zfand3
H3f3b
Stk32c
Aard
Cactin
Plekha7
Trim41
Nup107
Mapk14
Klhl21
Dgat1
Rer1
Morn1
Tfg
Ccnt2
Kansl3
Fer1l5
Iqcn
AW549877
Rps3a1
Nfat5
Zcchc14
Samd4b
Gmfg
Crtc1
Egr2
Eps15
Srm
Aig1
Fitm2
Nacc2
Map3k7
Hspa4
Slc26a8
Lamp1
Bricd5
Fbxw7
Vta1
2900026A02Rik
Spink5
Spdye4b
Rbak
Gpn3
Fam216a
Pip4p1
Ist1
Evpl
Grb2
Fstl3
Bmf
Kpna3
Pop7
Eif4a3
Lig4
Abhd13