ChIP-Atlas: Target genes

Potential target genes for Sox9

Query protein: Sox9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX15046887 | MEF
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Sox9's Target genes

◢ Sox9: Average

◢ SRX4554102: 3T3-L1

◢ SRX1271841: Atrioventicular canals

◢ SRX1035108: Chondrocytes

◢ DRX028800: Embryonic gonad

◢ DRX028798: Embryonic limb

◢ SRX1271842: Embryonic limb

◢ SRX1035119: Embryonic nose

◢ SRX1769357: Embryonic testis

◢ SRX1769358: Embryonic testis

◢ SRX450830: Epidermis

◢ SRX19952385: Gq-CNO

◢ SRX450826: Hair follicle stem cells

◢ SRX450828: Hair follicle stem cells

◢ SRX2208544: Intestinal stem cells

◢ SRX2208545: Intestinal stem cells

◢ SRX104231: Limbs and tails

◢ SRX15046886: MEF

◣ SRX15046887: MEF

◢ SRX4496821: mESC derived glial cells

◢ SRX4496822: mESC derived glial cells

◢ SRX4496823: mESC derived glial cells

◢ SRX130589: Neural tube

◢ DRX138318: Submandibular Gland

◢ SRX1023381: Unclassified

◢ SRX15441804: Unclassified

◢ SRX15441805: Unclassified

◢ SRX15441806: Unclassified

◢ SRX19952382: Unclassified

◢ SRX19952387: Unclassified

◢ SRX19952389: Unclassified

◢ Sox9: STRING

Tcstv3
Oprd1
Aard
Cldn34d
Galnt9
Rtn2
Ppm1n
Dab1
Plekha7
Gm3739
Mmp15
Pde3a
Arrdc4
Adamts19
Ccdc85c
Galr3
Ccdc3
Cnnm3
Plvap
Dpysl4
Mad2l2
Draxin
Adcyap1r1
Ubd
Olfr94
Yif1b
Kcnk6
P2ry1
Reln
Ampd3
Igfbpl1
Hr
Lrrc3b
Lrrn4
Gm2237
Cnnm1
Bmp7
Btbd11
Sema3f
Ret
Rftn1
Sall4
St6galnac2
Htra4
Cabp7
Prkcz
Ier5l
Synm
Gm5165
Jph3
Pm20d2
Nt5c2
Ina
C2cd4b
Prkcq
Mroh5
Gm6569
Bmp2
Srm
Kcnb2
Kcns2
Dock8
H3c15
H3c14
H2ac19
H2ac18
Ffar4
Tmem179
Adcy8
Fnbp1
Gcnt1
Efcc1
Egr2
Ephb1
Homer2
Fam189a1
Gm3752
Prtg
Adcy9
Paip2b
Gda
Rapgef5
Bhlha9
Tjp3
Pip5k1c
Tpcn1
Iqcd
Ascl2
Pakap
Sox18
Plxnd1
Phpt1
Ajm1
Kctd1
Ppp2r5a
Gjd3
C2cd4a
Gxylt2
Tpbgl
Kcnk12
Dact2
Tarbp1
Fdft1
Emb
Gm3488
Gatad2a
Col27a1
Fgfbp3
Ntsr2
Unc5a
Syt10
Ak5
Celsr1
Dusp2
Astl
Igfbp5
Oxr1
Nefl
Gm5796
Tbx20
Pax4
Kmt2a
Gja3
N4bp2l1
Adrb3
Plag1
Zfp143
Tmem200c
Ptger3
Kbtbd13
Calm3
Adcy1
Insyn1
Gfra4
Gpr84
Tppp
Car7
Gabra5
St6gal2
Dolpp1
Cdh4
A830018L16Rik
Pygo1
Wnt3a
Sema5b
Stum
Lrrc75b
Tmem132b
Ggt1
Brox
Aida
Usp13
Reep1
Scn1b
Igdcc3
Gm3411
Slc35f3
Car15
Gipc1
Prkaca
Rasef
Fzd10
Ankrd54
Lysmd2
Dlgap2
Osbp
Lrrn2
S1pr5
Sorcs1
Rhbdl3
Adamts15
Eya2
Zbtb16
Slit3
Wnt3
Rerg
Trappc6a
Bloc1s3
Dynlt1b
Col19a1
Ap1b1
Nefh
Abhd2
Olfm1
Prima1
Adcy3
Gpr27
Sp1
Jpt2
Zfp869
Pitpnm1
Cdk2ap2
1700001C19Rik
Wnt7a
Fgfr1
Tmem178
Gm3636
Grin3b
Tnrc6b
Enox1
B3gnt7
Pcdh1
Atp1b1
Slc22a3
Gbx2
Irx4
Gng13
Mixl1
Gimap5
Gimap1
Fam53c
Shisa2
Grid1
Svep1
Vax1
Prdm13
Shc2
Abtb2
Rnf165
Pax6
Sharpin
Maf1
Gm35339
2810459M11Rik
Galnt10
Trnp1
Gm3667
Kcnq3
Slc24a2
Cby3
Pdzrn3
Ankrd34b
Kcnq4
Gldn
Zbtb7c
Gm3500
Adarb1
Rrbp1
Kcnj12
Atp8b1
Nmbr
Arid4a
Ednrb
Dlgap4
Gm30191
Grrp1
Klf11
Aph1c
Atoh8
Kcna7
Fbrsl1
Hhipl1
Susd1
Ttc9
Dlk1
Ky
Pcbp3
Kcnip3
Shisa9
Gm10406
Lingo2
Mapt
Nptxr
G3bp1
Cnot3
Shisa8
Nkx1-2
Zfyve28
Cfap99
C130074G19Rik
H1f10
Cul2
Slc6a17
Prkg2
Rab11b
Rab11fip4
Nkd2
Ptprt
Ush1g
Otop2
Wnt4
Tmem158
Pmp22
Ebf4
Ppic
Lama1
Kcnq2
Mxd4
Foxi3
Astn2
Tmem30b
Npc2
Isca2
Xpc
Lsm3
Hs3st4
Spsb4
Rasgrf2
Lonrf2
Syt12
Gsg1l
Onecut3
Pif1
Lurap1l
Tfdp1
Gm38538
Crhr2
Rnf144b
Asap1
Dmrt2
Cftr
Insyn2a
St8sia1
Galnt16
Lmo1
Colgalt2
Lypd6
Soga1
Fam43b
Cnr1
Mafa
Unc5b
Slc22a23
Hmgcs1
Neurod2
Cdca7l
Ap3m2
Foxe3
Fam163b
Kit
Skor1
Kpnb1
Mxd1
Nt5e
Zfp960
P2rx5
Bhlhe23
Hrc
Ubald2
Dipk1c
Ube2ql1
Rgs9bp
Ankrd27
Pdxp
Tepsin
Ndufaf8
Ap2a1
Fam83d
Rims4
Ngdn
Gas1
Kcnma1
Fndc10
Vps26b
Ncapd3
Hmx1
Ube2b
Cdkl3
Gse1
Olig1
Atp1a3
Pdzrn4
Spint1
Ccdc177
Frmd4b
Pym1
Dgka
Ripply2
Cmc2
Cenpn
Adamts2
Fbn2
Fam78b
Grm6
Col23a1
1110032F04Rik
B3gat1
Tgfa
Sertm1
Zfp654
Cggbp1
Egr3
Clip4
Man1c1
Gm3383
Fzd2
Rbp4
Spns2
Efnb2
Col15a1
Rpn2
Mroh8
Camk2b
Dock10
Ebf1
Plekhd1
Wnk2
Map3k5
Tmie
Als2cl
Sstr1
Wscd1
Klhl40
Stox1
Adgrb1
Galnt13
Tmem210
Lrrc26
Kank4
Maneal
Mme
Mvk
Mmab
Gm51425
Myh10
Tdrkh
Islr2
Chst3
Cbln4
Wnt11
Pdik1l
Rnf125
Foxb1
Crhr1
Sp2
Ngf
Vangl1
Ppm1b
Lrrfip1
Mex3c
Lrrc10b
Cpm
Abhd17a
Pkp1
Flt3
Qrfprl
Ube2c
Per1
Slc24a4
Ensa
Qrfpr
En2
Atp10a
Nav2
Sstr2
Lhx3
Drd5
Slc30a10
Kmt5a
Rassf10
B4galt6
Kcns1
Chd5
Dcaf11
Recql
Golt1b
Lingo1
Rbx1
Ptbp1
Sap130
Kcna6
Apba2
Ss18
Stac2
Ankhd1
Clec2l
Zmiz1
Ctnnbip1
Wnt2
Ttc41
Hsp90b1
Rpusd1
Chtf18
Glrx5
Dtna
Slc43a1
Stip1
Aplp2
Sdk2
Cck
Pou3f1
Misp3
Irx2
Ptpn14
Slc16a14
Gpr25
Dgcr8
Pcsk5
Tle4
Wnt5b
Rcor2
Cnpy1
Tmem121
Flt4
Tmem215
Ppm1l
Adamtsl3
Nsg1
Samd4b
Gmfg
Sun1
Vav3
Gpr88
Zfat
Pdlim1
Tbx21
Ksr2
Megf11
Gdf7
Shisal1
Cd83
Srpr
Foxred1
Pde1b
Mtch1
Egr4
Map6d1
Cyth1
Nudt17
Twist2
Tcf19
Cchcr1
Isl1
Nrp1
Srgap2
Fam72a
Insig1
Gdpgp1
Cib1
Endod1
Col13a1
Kmt5c
Pias4
Cgas
Adrb1
Ppp2r2c
Acot3
Rnf144a
Pced1b
Amigo2
Mpv17l
Tle1
Popdc3
A930017K11Rik
Htr1b
Fgf3
Rab40c
Kctd12
Stk32c
Cpsf1
Cebpd
Dach1
Lsamp
Wnt1
Ska2
Prr11
Sp4
Fam20b
Nudt2
Kif24
1190005I06Rik
P4hb
Dsg2
Tbl1xr1
Sqle
Eva1a
Cpne5
Rnf7
Itga4
Kcnq1
Clmp
Abcc8
Marchf11
Kcnh1
Tafa5
Acot1
Rab5b
Colgalt1
Bsdc1
Greb1l
C1ql1
Gnal
Tom1l2
Drc3
Cacnb2
Prmt8
Cnot1
Gramd1b
Prex2
Npnt
Helt
Rgs7bp
Gdf10
Grk6
Plxnc1
Nlgn1
Atp5g1
Megf6
Calhm6
Dock9
Fem1a
Aktip
Atrnl1
Klf10
Kndc1
Bmper
Ift140
Cramp1l
Hsd11b2
Trim62
Fam163a
Sfxn2
Arl3
Cep192
Ptpdc1
Prdm6
C2cd2
Zfp800
Nalcn
Tm6sf1
Gm45623
Fam76a
Dnpep
Epb41l3
Syngap1
Cuta
Ube2d1
Smtnl2
Htr1d
Ggct
Tesk2
Wasf2
Dusp28
Rnpepl1
Arid3c
Pde8b
Aldh1a3
Ryr3
Tom1
Sost
Dhh
Atp5b
Nfatc1
Ttbk2
Nipal2
Tnfrsf21
Ctnnd2
H60b
Vgll2
Tomm40
Prtn3
Plppr3
Cntn5
Ntn1
Zfp385b
Trim47
Polr3h
Lpar3
Cacna2d2
Rax
Dll1
Nppc
Hdac2
Snrpd2
Qpctl
Mmd
Nmral1
Kdm4b
Hcn4
Prph
Slbp
Xylt1
Mrtfa
Dok7
Acvr2b
Efcab1
Kank1
Olig2
Gpr135
St8sia2
Zswim4
Dlx5
Mis12
Derl2
Gsc2
Ess2
Tmem60
Phtf2
Slc2a13
Cyp26a1
Hnrnpl
Zfp853
Nabp1
Dlc1
Esyt3
Gpam
Insm2
Grm5
Pim1
Gm3696
Rnf207
Hmcn2
Asic2
Dnajb1
Mtmr4
Nol4l
Slc4a11
Tpmt
Kdm1b
Msc
Sfrp5
Adra2c
Wdr25
Wars
Panx1
Camta1
Mpzl1
Hs3st3b1
Sptbn2
Srek1ip1
Cwc27
Zfyve21
Xrcc3
Esco1
Pla2g6
Ebag9
Has2
Ugt8a
Traf2
Lrch4
Fbxo24
Lrif1
Ankrd50
Deptor
Slc26a4
Tbc1d30
Fbln7
Npas1
Kcnk15
Acot5
Zxdc
Rab8a
Adamts9
Add2
Grin2c
Cep131
Sgk3
Susd5
Foxf1
Kcnn2
Nacc2
Spry1
Gm5784
Efhd1
Gm10499
Nkpd1
Hspa1b
Cecr2
Sh2b2
Vegfa
Arhgef7
Tril
Man2a1
Rai1
Nrg2
Npas2
Kcnc1
Bcl6
Tob1
Tedc1
Crip1
Amz2
Gsr
Shroom3
Eya1
Igfbp2
Gnaz
Dop1b
Ghsr
Clic4
Sertad2
Dpf3
Ascl4
Adamts20
Mlst8
AW549877
Sh3bp5
Foxk2
Dgkg
Atoh7
Olig3
Mrpl21
Ighmbp2
Map3k3
Chadl
Cic
Slc25a42
Actn1
Myh9
Dact1
Klhl35
Dynlt1a
Lingo3
Gm20346
Anp32a
Grik1
Ephx4
Irf4
3110082I17Rik
Cyp46a1
Kcnk9
Ryr2
Baiap2
Hmgn1
Cdkn3
Camsap3
Kl
Igsf21
Prrt4
Smim43
Ptov1
Cyp2u1
Paqr9
Arpp21
Sv2c
Prdm10
Hnrnpc
Dffb
Cep104
Trim45
Bcl10
Tcf15
Adam22
Tsga10
Cyld
Chn2
Mei1
Acy1
Sdf2l1
Arhgap33
Fjx1
Notum
Myrip
Arhgap6
Gins2
Cdk5rap3
Plxna2
Artn
D430041D05Rik
Slc1a2
Nkx2-5
Pin1
Pkd1
Mrpl38
Chaf1b
Rab3d
Kcnc4
Rusc2
Hip1
Osbpl2
Plcb1
Pdgfb
Hcn2
Slc35f2
Hyou1
Proser2
Paqr3
B4galnt3
Prss56
Nes
Chrnd
Cited1
Btbd17
Flcn
Tjp2
Ap3d1
Hey2
Sptbn4
Mdm1
Blvrb
Pdpk1
Ngfr
Tmem123
Wdr20
Fzd8
Ndst2
Hspa5
Cyth2
Ticrr
Trim71
Ltbp4
Rtn4rl1
Dph1
Rras2
Fzd9
Phyhipl
Fdxr
Fam43a
Atg9b
Bhlhe22
Syk
Mgat5b
Bean1
Zfp687
Kcnk3
Creb3l2
Sulf2
Dnajc3
Jakmip3
Cenpu
Cnnm2
Plaat1
Lamb1
Smoc2
Tnfrsf1b
Htra3
Efna2
Kcng2
Dlx1
Tspan17
Htr7
Scrt1
Sox9
Ppp6r3
E2f1
Stxbp6
Cxcl14
Psip1
Elmo2
Dennd5b
Mboat2
Zfp469
Klhl23
Atp2b3
Dscam
Nlrp10
Eif3f
Hspa1l
Hspa1a
Ncapd2
Mrpl51
Col18a1
Sort1
Rab22a
Igf2
Dnm2
Kri1
Cdkn2d
Limk1
Igfbp3
Wnt9b
Top2a
Pabpn1
Gpr155
Gatd1
Prkab2
Ntmt1
Lypd1
Ocln
Vkorc1l1
Cdca4
Hmgcr
D16Ertd472e
Vps4a
Egln3
Map3k21
Lrp3
Smim17
Cebpa
Fyco1
Fzr1
Natd1
Atg4d
Obsl1
Inha
Rap1gap2
Fcrlb
Adcy2
Lepr
Sst
Gipc2
Gm2102
Tmem51
Cdca7
Glrb
Lbx1
Cltc
Afg3l2
Iqsec3
Fmnl1
Fut9
Dll3
Insm1
Angptl4
Bricd5
Pgp
Emilin3
A4galt
Mtmr7
Sgtb