ChIP-Atlas: Target genes

Potential target genes for Sox9

Query protein: Sox9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4554102 | 3T3-L1
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Sox9's Target genes

◢ Sox9: Average

◣ SRX4554102: 3T3-L1

◢ SRX1271841: Atrioventicular canals

◢ SRX1035108: Chondrocytes

◢ DRX028800: Embryonic gonad

◢ DRX028798: Embryonic limb

◢ SRX1271842: Embryonic limb

◢ SRX1035119: Embryonic nose

◢ SRX1769357: Embryonic testis

◢ SRX1769358: Embryonic testis

◢ SRX450830: Epidermis

◢ SRX19952385: Gq-CNO

◢ SRX450826: Hair follicle stem cells

◢ SRX450828: Hair follicle stem cells

◢ SRX2208544: Intestinal stem cells

◢ SRX2208545: Intestinal stem cells

◢ SRX104231: Limbs and tails

◢ SRX15046886: MEF

◢ SRX15046887: MEF

◢ SRX4496821: mESC derived glial cells

◢ SRX4496822: mESC derived glial cells

◢ SRX4496823: mESC derived glial cells

◢ SRX130589: Neural tube

◢ DRX138318: Submandibular Gland

◢ SRX1023381: Unclassified

◢ SRX15441804: Unclassified

◢ SRX15441805: Unclassified

◢ SRX15441806: Unclassified

◢ SRX19952382: Unclassified

◢ SRX19952387: Unclassified

◢ SRX19952389: Unclassified

◢ Sox9: STRING

Cldn34d
Kmt2a
Tcstv3
Brox
Aida
Slc39a10
Nup107
Denr
Dagla
Hnrnpa2b1
Cbx3
Haspin
Cenpu
Ddx17
Aldh18a1
Wwox
Baz2a
Gpr137
Bad
Cwc22
Snx12
Zfp646
Zfp668
Tmem125
Qrich1
Cdk12
Ints10
Kansl3
Fer1l5
Psmd5
Cutal
Slc25a25
Naif1
Zfp523
Styxl1
Mdh2
Vmn1r2
Fut10
Atg101
Eapp
Ube2d3
Polq
Eps15
Rbm39
Spdl1
Tex14
Cipc
Atxn7l2
Ncbp3
Mms22l
Mettl18
BC055324
Mapk14
Slc26a8
Bzw1
Adgrl1
Eif4a3
Stxbp4
Cox11
Pradc1
Cct7
Zfp41
Arl14ep
Nudt3
Arf3
Wdr77
Atp5pb
Coq9
Ciapin1
Poldip3
Rps19
Ube2z
Tcam1
Smarcd2
Septin7
Ube2i
AW549877
Prpsap1
Hjurp
A730008H23Rik
Epc2
Zzz3
Lamp1
Gm4981
Rnf115
Polr3c
Capn15
Pcbp2
H3c15
H3c14
H2ac19
H2ac18
Gm51573
Mob1a
Tab1
B4galt7
Gpx8
Gins3
Hspa4
Mrpl12
Proser1
Nhlrc3
Dnajb4
Fubp1
Arhgef1
Dffb
Cep104
Rad1
Brix1
Gins2
Mrnip
Yipf4
Mdm2
Fam53c
Trim41
Sirt4
4931408C20Rik
Znrd1as
Znrd1
Nfkbiz
Zfp142
Bcs1l
Mtf2
Ift46
Arcn1
Hdgf
Ppp4r3b
Ckap2
Mcph1
Ireb2
Cct8
Cpsf1
Cpsf6
Ska2
Prr11
Atf7
Ptcd2
Mrps27
Glce
Slc25a4
Gm3448
Gm3417
Tcte3
Ermard
Nudt1
Smarcd1
Pfdn5
Eif1ad
Banf1
Usp3
Tfb2m
Cnst
Mrpl21
Ighmbp2
Ect2
Cox7a2
Nsun3
Rpl7l1
Prdm10
Cops4
Adgrf2
Xpc
Lsm3
Dnajc7
Nkiras2
Gm51598
Ttc14
Insr
Srsf7
Tmem107
Ahctf1
Cnot8
Exosc6
Smc2
Hps6
Armh3
Atf2
Rps28
Ndufa7
Ppil1
BC004004
Ncbp2
0610012G03Rik
Dck
Kazald1
Ssbp2
Sfi1
Ddx20
Eif4g2
Dicer1
Mak16
Mettl1
Eef1akmt3
Eif4enif1
Lyz1
Slc35e3
Ddhd2
Yod1
Pfkfb2
Taf12
Cdkn2aipnl
Washc1
Sgms1
Speer4c
Flcn
Rraga
Creld2
Alg12
Rubcn
Fyttd1
Slc39a9
Erh
Tbpl1
Tomm22
Stard7
Gm13285
Gm13278
Ifnz
Gm13277
Gm13276
Myef2
Arid1a
Cmc2
Cenpn
Trappc5
Fcor
Oga
Slc35g3
Polr2a
Tpst1
Phf23
Gabarap
Ppm1l
Rab33b
Pdia5
Git2
Ankrd13a
Rbm25
Cdc25c
Ankrd17
Txnip
Rap2b
Smim10l1
Rfwd3
Lrpprc
Ankfy1
Stat1
H4bc24
H2bc23
H2ac24
H2ac23
H4c18
Spring1
Rnft2
Rpn2
Mroh8
Srp68
C1qbp
Ssrp1
P2rx3
Lsm5
Ddx42
Ccdc47
Brpf1
Kif20b
Wdr27
1600012H06Rik
Smg8
Gtf3c6
Tut7
Lyz2
Asah1
Kdsr
Sass6
Calm3
Rgl2
Ndufa5
Asb15
Dbr1
Sod2
Akr1b3
Zcchc4
Rad18
Pxmp2
Pole
Fam133b
Gga1
Gfm1
Ska3
Mrpl57
Wdr90
Tln1
Creb3
Noct
Scamp1
Kpna1
Tjp3
Pip5k1c
T2
Iqch
Aagab
Phrf1
Prkdc
Cnot6
Gipc1
Il31ra
Mia2
Cdiptos
Cdipt
Rita1
Ddx54
Por
Slbp
Ccdc85c
Mcm4
Jag2
Taf15
Rpl22
Sspn
Arrdc4
Septin11
Asmt
Tigd5
Eef1d
Gnai2
Akirin1
Dut
Myh14
Rmnd5a
Sash1
Fus
Prox2
Ndufb1
Cpsf2
Arid4a
Olfr806
Aldh4a1
Cln8
Ptov1
Hdac2
Ift27
Kctd2
Atp5h
Atg12
Ap3s1
Arntl
Tmem260
Abhd6
Ndst2
Hyal2
Uqcrh
Lrrc41
Psip1
Uchl3
Ptcd3
Polr1a
Dohh
Tada3
Arpc4
Prkci
Galnt10
Ptdss1
Mterf3
Madd
Mlst8
Eif3b
Nol8
Cenpp
Eed
Cenpe
Cbr3
Ss18
Bcl6
BC005537
Dnmt1
Atrnl1
Gnb2
Lsg1
Sp2
Ube2b
Cdkl3
Junb
H2-DMa
Brd2
Rtn3
Polg
Itgb4
G3bp1
Paxip1
Dlst
Pknox1
Pik3r3
Raly
Wasl
Oasl1
Myl12a
Flad1
Zfp143
Mat2a
Tst
Mpst
Fbxo33
Uros
Bccip
Rps29
Mtmr14
Cul2
Srek1ip1
Cwc27
Diaph1
Vmn2r102
Smc3
Map7d1
Cltc
Sharpin
Maf1
Gm35339
Robo1
Cd164
Ajuba
Fam20b
Fgd4
Ankrd54
Oxr1
Dot1l
Rps27l
Dhrs3
Trir
Get3
Ppp1r13l
Sec14l1
Dgat2
Rfx1
Ly6g6f
Abhd16a
Paip2b
Zfp219
Tmem253
Pa2g4
Abhd2
Pkia
Srxn1
Hexim2
Rpl19
Rhbdd3
Ewsr1
Cacnb1
Slc35e2
Cd3eap
Mfsd8
Selenow
Tspan4
Polr2l
Nphp4
Kcnab2
Zfp869
Smg9
Nemf
Znhit1
Plod3
Dpp9
Hnrnpc
Lrrc56
Hras
Akt2
Cdca7l
Rab5b
Spsb3
Nubp2
Ap2m1
Crebzf
Dolpp1
Tmem41b
Mtss2
Eif2ak3
Calml3
Pfdn4
Inka1
Rnasek
0610010K14Rik
Cnot1
Fanci
Tepsin
Ndufaf8
Atp6v0c
Osbp
Bzw2
Ankmy2
Atp5b
Top2a
Fbxl14
Fam227b
Dtwd1
Phlda3
Tmem250-ps
Fam227a
Cby1
Cdt1
Igsf8
Per2
Gm5165
Sp1
Tom1
Tjp2
Ap3m2
Tcp11l2
Hrc
Abhd18
Frat2
Wasf1
Cdc40
Dnajc16
Casp9
Rnf5
Agpat1
Slc39a3
Mvk
Mmab
Tbck
Aimp1
Cic
Mmp15
Traf2
Susd6
Pole3
Alad
4933430I17Rik
Yif1b
Tle3
Rab11b
Trappc9
Ctnnb1
Bcl9l
Nme1
Stip1
Camta1
Zfp821
Ubr4
Mblac1
Get4
Slc35b1
Ccser2
Arl2
Gtf2a1
Uvssa
Tnrc6b
Nmral1
Prr19
Pafah1b3
Slc14a2
Ephb2
Atg16l2
Slc30a5
Chmp7
Zxdc
Tbc1d17
Akt1s1
Ube2c
Cfap20
Ankhd1
Frmd6
Dnm2
Rbbp6
Htra2
Dqx1
Them6
Stat3
Frat1
Bbs2
Nt5c3
Limch1
Lfng
Sema3b
9030025P20Rik
Rpl27
Ilf2
1700016H13Rik
Ints4
Fkbp3
Fancm
Nuf2
Mapkapk5
Gatad2a
Isy1
Fdft1
Cspp1
Cops5
Tmem218
Smim17
Taf9
Rad17
Myadm
Ak6
Angptl4
Spty2d1
Chordc1
Mtch2
Tob1
Ddx41
Birc2
Lrch4
Fbxo24
Mapk8ip1
Magi1
Fchsd2
Trip10
Khsrp
Gpr108
Tpt1
Prkaca
Mrpl30
Mitd1
Wdfy2
Utp3
Plekha1
Get1
Tecpr1
Plekhb1
Tcerg1
Rusc2
Rarg
Ss18l2
Opa1
Mis12
Fnbp1
Derl2
Gfra4
Hexim1
Nfatc2ip
Sncg
Mmrn2
Gm3435
Kremen1
Pip4k2b
Mrps11
Mrpl46
Zscan25
Cct5
Atpsckmt
Clic4
Tubb4b
Gramd1b
Fam149b
Ecd
Glrx5
Cnot3
Tcf3
Limk2
Zfp607b
Rgs3
Frmd4b
Faf1
Gopc
Esyt2
Oprd1
Kpnb1
Nudt2
Kif24
Med6
Zfp24
Tomm40
Snrpc
Zswim4
Zfp687
Kifap3
Niban2
Palb2
Dctn5
Smim4
Nt5dc2
Hmgcs1
Nabp1
Armc1
Psmd3
Rps12
H4c3
H1f6
Utp18
Tsga10
Mbtd1
Actr3
Usp20
BC005624
Sema3f
Tmem262
Hes6
Rbbp9
Calm1
Ttll7
Gtf2f1
Wdr92
Pno1
Rab4b
Mia
Zfand3
Pan2
H3f3b
Stk32c
Inip
Aard
Nectin3
Kmt5c
Cactin
Ttc41
Hsp90b1
Plekha7
Rbm5
Sigmar1
Klhl21
Prpf40a
Dgat1
Arl6ip6
Rer1
Morn1
Tfg
Ccnt2
Kctd14
Iqcn
Rps3a1
Nfat5
Zcchc14
Samd4b
Gmfg
Crtc1
Zfp526
Egr2
Dedd2
Nup133
Srm
Aig1
Fitm2
Nacc2
Map3k7
Zfp654
Cggbp1
Ngdn
Cyth1
Bricd5
Fbxw7
Vta1
2900026A02Rik
Spink5
Spdye4b
Rbak
Gpn3
Fam216a
Pip4p1
Ist1
Evpl
Grb2
Fstl3
Pin1
Bmf
Rel
Hdac1
Kpna3
Pop7
Rab28
Lig4
Abhd13
Sde2
Ifna13
Zfp574
Grik5
Gale
Ap2a1
Arhgef4
Xrcc1
Pinlyp
Uqcrq
Gdf9
Zfp385b
Tmco3
Dcun1d2
Ltbp1
Abcf2
3110082I17Rik
Dap3
Supv3l1
Copz1
Rpl3
Gorasp2
Mef2a
Zfat
Bod1l
Eif4e
Ift140
Cramp1l
Anln
9530077C05Rik
Poc5
Ubald2
Fam3c
Ttll5
Rlbp1
Erg28
Arhgap11a
Zbtb40
Mideas
Rps7
Lemd1
Zc3h18
Arf2
Meis1
Rasip1
Chchd2
Rnf7
Apobec2
Tmcc3
Oacyl
Sema4d
Hbp1
Aebp2
Mettl25
Hr
Ensa
Ccdc59
Xpnpep3
St13
Jund
Colgalt1
Dhx32
Fam83b
Ltbp4
Spc25
G6pc2
Fdxr
Zfyve21
Xrcc3
Sacm1l
Rbbp5
Npc2
Isca2
Kcnn1
Cep63
Anapc13
Slc33a1
Gpatch8
Rap2a
Malt1
Adnp
Nr6a1
Usp12
P4hb
Cdca8
9930104L06Rik
Cfap298
Rab6a
Dcp1a
Nlk
Zfpl1
Cdca5
Tmem198b
Ep400
Dnajc14
Yars
S100pbp
Pias4
Pex3
Pdcd4
Adat2
Dab1
Arl15
Slc2a9
Med23
Fra10ac1
Banp
Myl12b
Irf2bp2
Rps6ka5
Man1b1
Rwdd1
Galnt9
Wasf2
Nup54
Birc5
Aph1b
Ap1g1
Nrbf2
Timm13
Usp1
Smarcal1
Katnb1
Ube2j2
Cebpa
Kansl2
Med17
Mknk2
Txnl4b
Dhx38
Ptpn14
Atp5g1
Ss18l1
Psma7
Pmepa1
Kifc5b
Ttll10
Vps26c
Srgap2
Fam72a
Rab21
Hspa5
Nomo1
Abcc6
Cox18
Dhx33
Jpt2
Klf7
Kbtbd3
Aasdhppt
Arid3b
Zmynd8
Naa35
Nol6
Stx16
Clptm1
Vwa1
Mafa
Rab40c
Rtkn
Smim38
Srd5a1
Nsun2
Tacc1
Eif5
Snrnp200
Btbd11
1810024B03Rik
Ier5
Ube2f
Jun
Sh3gl1
Chaf1a
Rbx1
Rad23b
Gm51425
Ndufs7
Ric8b
Nlrp10
Eif3f
Smim14
Tubg1
Retreg3
Cst6
Clasp2
Saysd1
Cirbp
Mllt11
Cdc42se1
Rin2
Plekhh2
Vapa
Lsr
Fam187b
Tex2
Tmed2
Ier5l
Yipf2
Timm29
Thap12
Trib1
Calr
Sun1
Commd1
Usp53
Smc6
Gen1
Ppat
Paics
Stt3a
Nedd4
Unkl
Ubald1
Mindy2
BC003965
Fem1b
Adamts19
Psmb2
Wdr36
Lancl2
Ufl1
Gm3739
Khdrbs1
Sh2d5
Mrpl1
Cdk11b
Otud6b
Mtres1
C1d
Ppp2r5a
Mrpl44
Hnrnpl
Stag1
Setd3
Mbnl2
Ccnk
Atp8a1
Atp10a
Ing1
Cacybp