ChIP-Atlas: Target genes

Potential target genes for Sox9

Query protein: Sox9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX104231 | Limbs and tails
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Sox9's Target genes

◢ Sox9: Average

◢ SRX4554102: 3T3-L1

◢ SRX1271841: Atrioventicular canals

◢ SRX1035108: Chondrocytes

◢ DRX028800: Embryonic gonad

◢ DRX028798: Embryonic limb

◢ SRX1271842: Embryonic limb

◢ SRX1035119: Embryonic nose

◢ SRX1769357: Embryonic testis

◢ SRX1769358: Embryonic testis

◢ SRX450830: Epidermis

◢ SRX19952385: Gq-CNO

◢ SRX450826: Hair follicle stem cells

◢ SRX450828: Hair follicle stem cells

◢ SRX2208544: Intestinal stem cells

◢ SRX2208545: Intestinal stem cells

◣ SRX104231: Limbs and tails

◢ SRX15046886: MEF

◢ SRX15046887: MEF

◢ SRX4496821: mESC derived glial cells

◢ SRX4496822: mESC derived glial cells

◢ SRX4496823: mESC derived glial cells

◢ SRX130589: Neural tube

◢ DRX138318: Submandibular Gland

◢ SRX1023381: Unclassified

◢ SRX15441804: Unclassified

◢ SRX15441805: Unclassified

◢ SRX15441806: Unclassified

◢ SRX19952382: Unclassified

◢ SRX19952387: Unclassified

◢ SRX19952389: Unclassified

◢ Sox9: STRING

T2
Cldn34d
Tcstv3
Brox
Aida
Kpna1
Nfe2
Myh14
Vmn2r102
Fgd4
Oasl1
Foxp2
Apobec2
Clasp2
Rbbp9
Il31ra
Kctd14
Limch1
Rarg
Sema4d
Oat
Otogl
Lrrc75b
Psma8
Zfp637
Abtb2
Smg9
Wwox
Gpsm2
Ccser2
Ncaph
Prrg4
Fanci
Rlbp1
Smim38
Mtf2
Sspn
Ap2m1
Kcnj16
Mbnl2
Sema3b
Col9a3
Olfr806
Plod2
H2-DMa
Brd2
Ifna13
Marcksl1
Cpa5
Ap3m2
Dchs2
Aadacl2fm1
Rab4b
Mia
Papss2
Eipr1
Gfpt1
Csf2ra
Ptpn14
Pgpep1
Mycbpap
Zbtb18
Arhgef1
Tle3
Unc13c
Mfsd8
Rgs3
Sphk1
Asmt
Duxbl3
Duxbl2
Duxbl1
Esr1
Nhsl1
Bcl9l
Mical1
Mtss2
Slc26a1
Sorbs2
Cdh12
Pp2d1
Prickle1
Tmem125
Ak1
Stap2
Mpnd
Cep41
Plekhf2
Cnn3
Stat5b
Arhgef19
Dstyk
Chadl
Rara
Pygo2
Pbxip1
Abhd6
Sox5
Actg1
Ttll10
Gzmm
H2-T24
Slc14a2
Kcnn4
Acsbg1
Myadm
Fmnl2
Ccdc90b
Fzd2
Slc35a3
Zfp24
Me1
Nfatc1
Cyth1
Nedd4
Col9a1
Cemip2
Ppdpf
Calcoco1
Rbm5
Zfp143
1700034J05Rik
Tns2
Mtss1
Calml3
Mbnl1
Uchl4
Zfp598
Nynrin
Clip3
Slc35e3
Ankfn1
Pacs2
Cxxc5
Slc27a1
Col6a1
Cobll1
Spire1
Rcn1
Acsm3
Rtkn
Magi1
F830045P16Rik
Tnrc6b
Clec2g
Pnmal2
Ss18l2
Cbx5
Bambi
Cabcoco1
Inka1
Phldb1
Efnb3
Scx
Igsf8
Tmem63a
Vangl2
Plekhb1
Gpx4
Aanat
Veph1
Cracd
Rab34
Proca1
Rab8a
Ankar
Lekr1
Dusp11
Il25
Cmtm5
Ppp2r1a
A930018P22Rik
Rpl27
Srpk2
Fxyd3
Gpsm3
Bahcc1
Mrpl36
Syt8
Agt
Mlst8
Bricd5
Tnrc18
Pgp
Vdr
Mcam
Ccdc34
Greb1l
Wrnip1
Tjp3
Pip5k1c
Oga
Kmt2a
Iqch
Aagab
Cmc2
Cenpn
Lrpprc
Phrf1
Fam53c
Prkdc
Calm3
Flcn
Cnot6
Ptcd2
Mrps27
Gipc1
Mia2
Cdiptos
Cdipt
Rita1
Ddx54
Por
Ppm1l
Denr
Slbp
Ccdc85c
Git2
Ankrd13a
Mcm4
Jag2
Taf15
Rpl22
Arrdc4
Septin11
Tigd5
Eef1d
Gnai2
Akirin1
Dut
Asah1
Rmnd5a
Atg101
Prdm10
Cenpu
Sash1
Fus
Prox2
Ndufb1
Cpsf2
Arid4a
Aldh4a1
Cln8
Ptov1
Hdac2
Ift27
Kctd2
Atp5h
Atg12
Ap3s1
Arntl
Tmem260
Ndst2
Hyal2
Uqcrh
Lrrc41
Psip1
Uchl3
Ptcd3
Polr1a
Dohh
Tada3
Arpc4
Prkci
Noct
Eapp
Galnt10
Ptdss1
Mterf3
Madd
Eif3b
Nol8
Cenpp
Eed
Tex14
Rpn2
Mroh8
Cenpe
Slc35g3
Polr2a
Cbr3
Ss18
Bcl6
BC005537
Dnmt1
Wdr77
Atp5pb
Atrnl1
Gnb2
Lsg1
Sod2
Sp2
Ube2b
Cdkl3
Junb
Rtn3
Polg
Itgb4
G3bp1
Paxip1
Dlst
Pknox1
Pik3r3
Raly
Wasl
Myl12a
Flad1
Mat2a
Tst
Mpst
Fbxo33
Uros
Bccip
Rps29
Mtmr14
Cul2
Srek1ip1
Cwc27
Diaph1
Smc3
Map7d1
Cltc
Bzw1
Sharpin
Maf1
Gm35339
Robo1
Cd164
Ajuba
Fam20b
Ankrd54
Oxr1
Dot1l
Rps27l
Dhrs3
Trir
Get3
Ppp1r13l
Sec14l1
Dgat2
Xpc
Lsm3
Rfx1
Qrich1
Ly6g6f
Abhd16a
Ska2
Prr11
Paip2b
Zfp219
Tmem253
Pa2g4
Abhd2
Pkia
Srxn1
Hexim2
Rpl19
Rhbdd3
Ewsr1
Cacnb1
Slc35e2
Cdk12
Rbm25
Proser1
Nhlrc3
Srsf7
Cd3eap
Selenow
Tspan4
Polr2l
Hjurp
A730008H23Rik
Nphp4
Kcnab2
Zfp869
Nemf
Znhit1
Plod3
Dpp9
Hnrnpc
Lrrc56
Hras
Akt2
Cdca7l
Rab5b
Spsb3
Nubp2
Crebzf
Dolpp1
Tmem41b
Eif2ak3
Pfdn4
Rnasek
0610010K14Rik
Cnot1
Tepsin
Ndufaf8
Atp6v0c
Taf12
Osbp
Bzw2
Ankmy2
Atp5b
Top2a
Fbxl14
Fam227b
Dtwd1
Phlda3
Tmem250-ps
Fam227a
Cby1
Cdt1
Per2
Gm5165
H3c15
H3c14
H2ac19
H2ac18
Sp1
Tom1
Rab33b
Tjp2
Tcp11l2
Hrc
Abhd18
Frat2
Wasf1
Cdc40
Dnajc16
Casp9
Rnf5
Agpat1
Slc39a3
Mvk
Mmab
Tbck
Aimp1
Cic
Mmp15
Traf2
Susd6
Pole3
Gm3448
Gm3417
Alad
4933430I17Rik
Yif1b
Rab11b
Trappc9
Ctnnb1
Nme1
Stip1
Camta1
Zfp821
Ubr4
Mblac1
Get4
Slc35b1
Cct8
Arl2
Gtf2a1
Uvssa
Nmral1
Prr19
Pafah1b3
Tcte3
Ephb2
Atg16l2
Slc30a5
Chmp7
Zxdc
Tbc1d17
Akt1s1
Ints10
Mrpl21
Ighmbp2
Ube2c
Cfap20
Ankhd1
Frmd6
Dnm2
Rbbp6
Htra2
Dqx1
Them6
Stat3
Frat1
Bbs2
Nt5c3
Rbm39
Lfng
9030025P20Rik
Ilf2
1700016H13Rik
Ints4
Styxl1
Mdh2
Fkbp3
Fancm
Ermard
Nuf2
Mapkapk5
Gatad2a
Isy1
Fdft1
Cspp1
Cops5
Tmem218
Smim17
Taf9
Rad17
Ak6
Angptl4
Spty2d1
Chordc1
Mtch2
Tob1
Ddx41
Birc2
Lrch4
Fbxo24
Mapk8ip1
Fchsd2
Trip10
Khsrp
Gpr108
Tpt1
Prkaca
Mrpl30
Mitd1
Wdfy2
Utp3
Plekha1
Get1
Tecpr1
Tcerg1
Rusc2
Opa1
Mis12
Fnbp1
Derl2
Gfra4
Tmem107
Hexim1
Nfatc2ip
Sncg
Mmrn2
Gm3435
Kremen1
Pip4k2b
Mrps11
Mrpl46
Zscan25
Cct5
Atpsckmt
Clic4
Tubb4b
Gramd1b
Fam149b
Ecd
Glrx5
Cnot3
Tcf3
Ttc14
Limk2
Zfp607b
Txnip
Sfi1
Frmd4b
Faf1
Gopc
Esyt2
Oprd1
Kpnb1
Nudt2
Kif24
Med6
Tomm40
Snrpc
Zswim4
Zfp687
Kifap3
Niban2
Palb2
Dctn5
Smim4
Nt5dc2
Hmgcs1
Nabp1
Armc1
Psmd3
Rps12
H4c3
H1f6
Utp18
Tsga10
Mbtd1
Actr3
Dffb
Cep104
Usp20
BC005624
Sema3f
Tmem262
Hes6
Calm1
Ttll7
Gtf2f1
Wdr92
Pno1
Zfand3
Pan2
H3f3b
Stk32c
Inip
Aard
Nectin3
Kmt5c
Cactin
Ttc41
Hsp90b1
Plekha7
Trim41
Sigmar1
Nup107
Mapk14
Klhl21
Prpf40a
Dgat1
Arl6ip6
Rer1
Morn1
Tfg
Ccnt2
Kansl3
Fer1l5
Iqcn
AW549877
Rps3a1
Nfat5
Zcchc14
Samd4b
Gmfg
Crtc1
Zfp526
Egr2
Dedd2
Eps15
Nup133
Srm
Aig1
Fitm2
Nacc2
Map3k7
Hspa4
Zfp654
Cggbp1
Ngdn
Slc26a8
Lamp1
Fbxw7
Vta1
2900026A02Rik
Spink5
Spdye4b
Rbak
Gpn3
Fam216a
Pip4p1
Ist1
Evpl
Grb2
Fstl3
Pin1
Bmf
Rel
Baz2a
Hdac1
Kpna3
Pop7
Rab28
Eif4a3
Lig4
Abhd13
Sde2
Sgms1
Zfp574
Grik5
Gale
Ap2a1
Arhgef4
Xrcc1
Pinlyp
Uqcrq
Gdf9
Zfp385b
Tmco3
Dcun1d2
Rgl2
Ltbp1
Abcf2
3110082I17Rik
Dap3
Cipc
Supv3l1
Copz1
Ube2d3
Rpl3
Gorasp2
Mef2a
Glce
Zfat
Bod1l
Eif4e
Ift140
Cramp1l
Anln
9530077C05Rik
Poc5
Wdr27
1600012H06Rik
Ubald2
Fam3c
Ttll5
Erg28
Arhgap11a
Zbtb40
Mideas
Rps7
Lemd1
Zc3h18
Arf2
Meis1
Rasip1
Mob1a
Chchd2
Hnrnpa2b1
Cbx3
Ppp4r3b
Rnf7
Tmcc3
Oacyl
Hbp1
Aebp2
Mettl25
Hr
Ensa
Ccdc59
Xpnpep3
St13
Jund
Colgalt1
Dhx32
Fam83b
Ltbp4
Spc25
G6pc2
Fdxr
Zfyve21
Xrcc3
Ssrp1
P2rx3
Sacm1l
Rbbp5
Npc2
Isca2
Kcnn1
Cep63
Anapc13
Slc33a1
Mdm2
Gpatch8
Rap2a
Malt1
Adnp
Nr6a1
Haspin
Usp12
P4hb
Cdca8
9930104L06Rik
Cfap298
Rab6a
Dcp1a
Atf7
Nlk
Zfpl1
Cdca5
Tmem198b
Ep400
Dnajc14
Yars
S100pbp
Pias4
Pex3
Pdcd4
Adat2
Dab1
Arl15
Slc2a9
Med23
Fra10ac1
Banp
Myl12b
Irf2bp2
Rps6ka5
Man1b1
Rwdd1
Galnt9
Wasf2
Nup54
Birc5
Aph1b
Ap1g1
Nrbf2
Timm13
Usp1
Smarcal1
Katnb1
H4bc24
H2bc23
H2ac24
H2ac23
Ube2j2
Cebpa
Kansl2
Med17
Mknk2
Txnl4b
Dhx38
Atp5g1
Kdsr
Cdc25c
Ss18l1
Psma7
Dnajb4
Pmepa1
Kifc5b
Cpsf1
Vps26c
Psmd5
Cutal
Srgap2
Fam72a
Rab21
Hspa5
Ireb2
Nomo1
Abcc6
Cox18
Dhx33
Jpt2
Klf7
Kbtbd3
Aasdhppt
Arid3b
Zmynd8
Naa35
Nol6
Stx16
Spring1
Rnft2
Slc25a25
Clptm1
Vwa1
Mafa
Rab40c
Srd5a1
Nsun2
Tacc1
Eif5
Ssbp2
Snrnp200
Btbd11
1810024B03Rik
Ier5
Ube2f
Jun
Sh3gl1
Chaf1a
Rbx1
Rad23b
Gm51425
Ndufs7
Ric8b
Nlrp10
Eif3f
Smim14
Tubg1
Retreg3
Cst6
Saysd1
Cirbp
Cwc22
Mllt11
Cdc42se1
Rin2
Plekhh2
Vapa
Tut7
Lsr
Fam187b
Tex2
Pradc1
Cct7
Tmed2
Rps19
Ier5l
Yipf2
Timm29
Thap12
Trib1
Calr
Sun1
Commd1
Usp53
Smc6
Gen1
Ppat
Paics
Stt3a
Unkl
Ubald1
Mindy2
BC003965
Fem1b
Adamts19
Psmb2
Wdr36
Lancl2
Ufl1
Gm3739
Khdrbs1
Sh2d5
Mrpl1
Cdk11b
Ddx20
Otud6b
Mtres1
C1d
Ppp2r5a
Mrpl44
Hnrnpl
Stag1
Setd3
Ccnk
Atp8a1
Atp10a
Ing1
Atf2
Cacybp
Supt4a
Ggct
Upf1
Nvl
Plag1
Fubp1
Dst
Chmp5
Bag1
Mfsd4b4
Gas1
Ppwd1
Cenpk
Atg2a
Lsm14b
Kat6b
Eea1
Dbp
Car11
Sel1l
Phf12
Tram1
Parp6
Nudt9
2310057M21Rik
Hdlbp
Epg5
Psmb3
Pcgf2
Rtn2
Kif13b
H4c18
Dsg2
Ccdc126
Ppp3cb
Slc25a42
Dlc1
Herc2
Aff1
Ablim1
Sema4b
Polr3g
Mblac2
Fam89a
Arid1a
Map3k5
Ccna2
P4ha1
Rab5if