ChIP-Atlas: Target genes

Potential target genes for Sox9

Query protein: Sox9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: DRX028800 | Embryonic gonad
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Sox9's Target genes

◢ Sox9: Average

◢ SRX4554102: 3T3-L1

◢ SRX1271841: Atrioventicular canals

◢ SRX1035108: Chondrocytes

◣ DRX028800: Embryonic gonad

◢ DRX028798: Embryonic limb

◢ SRX1271842: Embryonic limb

◢ SRX1035119: Embryonic nose

◢ SRX1769357: Embryonic testis

◢ SRX1769358: Embryonic testis

◢ SRX450830: Epidermis

◢ SRX19952385: Gq-CNO

◢ SRX450826: Hair follicle stem cells

◢ SRX450828: Hair follicle stem cells

◢ SRX2208544: Intestinal stem cells

◢ SRX2208545: Intestinal stem cells

◢ SRX104231: Limbs and tails

◢ SRX15046886: MEF

◢ SRX15046887: MEF

◢ SRX4496821: mESC derived glial cells

◢ SRX4496822: mESC derived glial cells

◢ SRX4496823: mESC derived glial cells

◢ SRX130589: Neural tube

◢ DRX138318: Submandibular Gland

◢ SRX1023381: Unclassified

◢ SRX15441804: Unclassified

◢ SRX15441805: Unclassified

◢ SRX15441806: Unclassified

◢ SRX19952382: Unclassified

◢ SRX19952387: Unclassified

◢ SRX19952389: Unclassified

◢ Sox9: STRING

Tcstv3
Brox
Aida
Wdr77
Atp5pb
Cldn34d
Ptcd3
Polr1a
Rpl19
Cacnb1
Calm3
Cdk12
Ift27
Pknox1
Qrich1
Pik3r3
Phrf1
Arid4a
Arntl
Sharpin
Maf1
Gm35339
Pfdn4
Septin11
Tcp11l2
Tada3
Arpc4
Fus
Lrpprc
Cmc2
Cenpn
Cdiptos
Cdipt
Trir
Get3
Prkdc
Mcm4
Gipc1
Uchl3
Mat2a
Top2a
Dgat2
Taf15
Flad1
Denr
BC005537
Tigd5
Eef1d
Inip
Cenpe
Uqcrh
Lrrc41
Hyal2
Mblac1
Dcun1d4
Mlst8
Dolpp1
Dut
Mapk8ip1
Psmd5
Cutal
Eif3b
Ptcd2
Mrps27
Nr6a1
Dnm2
Cnot6
Por
Camta1
Rita1
Ddx54
Hexim1
Mgrn1
Srf
Dohh
Tepsin
Ndufaf8
Ap3m2
Mfsd13b
Cdr2
Prkci
Slc39a3
Oga
Wdr27
1600012H06Rik
Gnb2
Tctn2
Zswim4
Aldh4a1
Arrdc4
Tmem218
Mrps11
Mrpl46
Jun
Ppm1l
Lsg1
Atg101
Slbp
Tbc1d17
Akt1s1
Nphp4
Kcnab2
Cnot1
Sp2
Mia2
Dpp9
Dnmt1
Sash1
Styxl1
Mdh2
Tom1
Uros
Bccip
Rhbdd3
Ewsr1
Ube2d3
Fam227a
Cby1
Smim10l1
Hnrnpc
Cln8
Hs3st3a1
Abhd2
Eif2ak3
Ube2c
Tmem260
Atp5b
Mapk14
Slc26a8
Eed
Asah1
Ptdss1
Mterf3
Wasf1
Cdc40
Ankrd54
Atrnl1
Rmnd5a
Noct
Zfp383
Zfp27
Rbm39
Uhrf2
Gm12258
Trip10
Gpr108
Traf2
Prkaca
Arap1
Hrc
Ttll7
Psip1
Ankhd1
Pkia
Oxr1
Tmem102
Fgf11
Chrnb1
Elavl2
Eif4a3
Rpl22
Ttc41
Hsp90b1
Cdc25c
Fam76a
Ndufb1
Cpsf2
Ptov1
Tst
Mpst
Rnf5
Agpat1
Nucb2
Selenop
Samd4b
Gmfg
Cep135
Ncoa2
Map7d1
Naa35
Slc25a4
Hydin
Smc3
Frat1
Nudt2
Kif24
Rtn3
Nectin3
Ankfy1
Mvk
Mmab
Prr19
Pafah1b3
Fbxo33
Rps6ka5
C1d
Selenow
Ddx19b
Aars
Rtkn
Bcl6
Pin1
Nsun3
Siah1b
Fanci
Lrch4
Fbxo24
Rps7
Tspyl1
Glrx5
Pias2
Tmem198b
Dnajc14
Hdac2
Kmt5c
Ccdc85c
Raly
Tmbim6
Tcerg1
Per2
Kctd2
Atp5h
Paip2b
Usp1
Pawr
Crebzf
Rpl12
Lrsam1
Robo1
Pxmp4
Srek1ip1
Cwc27
Hspa4
Polg
Tnrc6b
Pan2
Nol6
Med30
Cd164
Wnt3
Srpk2
Zbtb40
Rab28
Rab5b
Timm17b
Pqbp1
Fchsd2
Dnajb4
Fubp1
Cep41
Atf7
Zswim1
Sel1l
Mtmr14
Gm5165
Atp8a1
Khsrp
Eif5
Madd
Nol8
Cenpp
Cic
Mob1a
Ift22
Sufu
Actr1a
Sos2
Rnpc3
Oscp1
Fam204a
2310022A10Rik
Timeless
Stip1
Tmem209
Ssmem1
Utp18
Mbtd1
Cfap77
Ttf1
Pip4k2b
Calcoco1
2610008E11Rik
Kat6b
Fdft1
Kansl2
Rpp38
Acbd7
Zfp687
Iqch
Aagab
Lamp1
Add1
Sipa1l1
Canx
Sarnp
Ormdl2
Sec23ip
Mcmbp
Isoc2b
P2ry2
Hdac1
Spsb3
Nubp2
Gripap1
Nudt1
Ly6g6f
Abhd16a
Ska2
Prr11
Mis12
Derl2
Kdm4b
Wrap53
Trp53
Zfp691
Pycr2
Myl12a
Srgap2
Fam72a
Mphosph8
Micos10
Cct5
Atpsckmt
Psmb2
Ephb2
Mucl3
Sh3glb2
Miga2
Wdr6
Paxip1
Tle2
Prpf40a
Arl6ip6
Rraga
Uba1
Immp1l
Elp4
Rlim
Uqcrq
Gdf9
Supt5
Scamp5
Spag8
Hint2
Gm20346
Anp32a
Zfp574
Grik5
Meis1
Srarp
Stxbp4
Cox11
Hnrnpr
Edrf1
Maco1
Tjp3
Pip5k1c
Galnt10
Uchl1
Uhrf1bp1
Rbm15
Wbp1
Ino80b
Acat2
Git2
Ankrd13a
Zfyve21
Xrcc3
Bub1
Ptch1
Pold4
Tmprss3
Prdm10
Ttbk2
Frem3
Smarcal1
Dcaf11
Ss18
Nudcd2
Hmmr
Flcn
Recql
Golt1b
Nr5a1
Rpusd3
Rbm27
Relch
Pign
Cemip
Rps19
Tbccd1
Dnajb11
Palb2
Dctn5
Zbtb5
Xrcc1
Pinlyp
Ensa
Tmem88
Naa38
Cyb5d1
Zfand3
Zfp143
Hbp1
Junb
Katnb1
Kdm4a
G3bp1
Tubb4b
Fam222a
Dcaf7
Sp1
Narf
Rcl1
Zfp869
Rpn2
Mroh8
Glce
Ap2a1
Ppp6r3
Rfx1
Psmb3
Pcgf2
Cfap73
Orai3
Ppm1b
Kctd9
Cdca2
Dcps
Gatad2a
Dbp
Car11
Ubald2
Rps6ka2
Osbp
Evi5l
Rab11b
Sult6b2
Kpna1
Tmem125
Kmt2a
T2
Fam53c
Il31ra
Wwox
Jag2
Sspn
Asmt
Gnai2
Akirin1
Myh14
Cenpu
Prox2
Olfr806
Atg12
Ap3s1
Abhd6
Ndst2
Eapp
Tex14
Slc35g3
Polr2a
Cbr3
Sod2
Ube2b
Cdkl3
H2-DMa
Brd2
Itgb4
Dlst
Wasl
Oasl1
Mtf2
Rps29
Cul2
Diaph1
Vmn2r102
Cltc
Bzw1
Ajuba
Fam20b
Fgd4
Dot1l
Rps27l
Dhrs3
Ppp1r13l
Sec14l1
Xpc
Lsm3
Zfp219
Tmem253
Pa2g4
Srxn1
Hexim2
Slc35e2
Rbm25
Proser1
Nhlrc3
Srsf7
Cd3eap
Mfsd8
Tspan4
Polr2l
Hjurp
A730008H23Rik
Smg9
Nemf
Znhit1
Plod3
Lrrc56
Hras
Akt2
Cdca7l
Ap2m1
Tmem41b
Mtss2
Calml3
Inka1
Rnasek
0610010K14Rik
Atp6v0c
Taf12
Bzw2
Ankmy2
Fbxl14
Fam227b
Dtwd1
Phlda3
Tmem250-ps
Cdt1
Igsf8
Arhgef1
H3c15
H3c14
H2ac19
H2ac18
Rab33b
Tjp2
Abhd18
Frat2
Dnajc16
Casp9
Tbck
Aimp1
Mmp15
Susd6
Pole3
Gm3448
Gm3417
Alad
4933430I17Rik
Yif1b
Tle3
Trappc9
Ctnnb1
Bcl9l
Nme1
Zfp821
Ubr4
Get4
Slc35b1
Ccser2
Cct8
Arl2
Gtf2a1
Uvssa
Nmral1
Tcte3
Slc14a2
Atg16l2
Slc30a5
Chmp7
Zxdc
Ints10
Mrpl21
Ighmbp2
Cfap20
Frmd6
Rbbp6
Htra2
Dqx1
Them6
Stat3
Bbs2
Nt5c3
Limch1
Lfng
Sema3b
9030025P20Rik
Rpl27
Ilf2
1700016H13Rik
Ints4
Fkbp3
Fancm
Ermard
Nuf2
Mapkapk5
Isy1
Cspp1
Cops5
Smim17
Taf9
Rad17
Myadm
Ak6
Angptl4
Spty2d1
Chordc1
Mtch2
Tob1
Ddx41
Birc2
Magi1
Tpt1
Mrpl30
Mitd1
Wdfy2
Utp3
Plekha1
Get1
Tecpr1
Plekhb1
Rusc2
Rarg
Ss18l2
Opa1
Fnbp1
Gfra4
Tmem107
Nfatc2ip
Sncg
Mmrn2
Gm3435
Kremen1
Zscan25
Clic4
Gramd1b
Fam149b
Ecd
Cnot3
Tcf3
Ttc14
Limk2
Zfp607b
Txnip
Sfi1
Rgs3
Frmd4b
Faf1
Gopc
Esyt2
Oprd1
Kpnb1
Med6
Zfp24
Tomm40
Snrpc
Kifap3
Niban2
Smim4
Nt5dc2
Hmgcs1
Nabp1
Armc1
Psmd3
Rps12
H4c3
H1f6
Tsga10
Actr3
Dffb
Cep104
Usp20
BC005624
Sema3f
Tmem262
Hes6
Rbbp9
Calm1
Gtf2f1
Wdr92
Pno1
Rab4b
Mia
H3f3b
Stk32c
Aard
Cactin
Plekha7
Trim41
Rbm5
Sigmar1
Nup107
Klhl21
Dgat1
Rer1
Morn1
Tfg
Ccnt2
Kctd14
Kansl3
Fer1l5
Iqcn
AW549877
Rps3a1
Nfat5
Zcchc14
Crtc1
Zfp526
Egr2
Dedd2
Eps15
Nup133
Srm
Aig1
Fitm2
Nacc2
Map3k7
Zfp654
Cggbp1
Ngdn
Cyth1
Bricd5
Fbxw7
Vta1
2900026A02Rik
Spink5
Spdye4b
Rbak
Gpn3
Fam216a
Pip4p1
Ist1
Evpl
Grb2
Fstl3
Bmf
Rel
Baz2a
Kpna3
Pop7
Lig4
Abhd13
Sde2
Sgms1
Ifna13
Gale
Arhgef4
Zfp385b
Tmco3
Dcun1d2
Rgl2
Ltbp1
Abcf2
3110082I17Rik
Dap3
Cipc
Supv3l1
Copz1
Rpl3
Gorasp2
Mef2a
Zfat
Bod1l
Eif4e
Ift140
Cramp1l
Anln
9530077C05Rik
Poc5
Fam3c
Ttll5
Rlbp1
Erg28
Arhgap11a
Mideas
Lemd1
Zc3h18
Arf2
Rasip1
Chchd2
Hnrnpa2b1
Cbx3
Ppp4r3b
Rnf7
Apobec2
Tmcc3
Oacyl
Sema4d
Aebp2
Mettl25
Hr
Ccdc59
Xpnpep3
St13
Jund
Colgalt1
Dhx32
Fam83b
Ltbp4
Spc25
G6pc2
Fdxr
Ssrp1
P2rx3
Sacm1l
Rbbp5
Npc2
Isca2
Kcnn1
Cep63
Anapc13
Slc33a1
Mdm2
Gpatch8
Rap2a
Malt1
Adnp
Haspin
Usp12
P4hb
Cdca8
9930104L06Rik
Cfap298
Rab6a
Dcp1a
Nlk
Zfpl1
Cdca5
Ep400
Yars
S100pbp
Pias4
Pex3
Pdcd4
Adat2
Dab1
Arl15
Slc2a9
Med23
Fra10ac1
Banp
Myl12b
Irf2bp2
Man1b1
Rwdd1
Galnt9
Wasf2
Nup54
Birc5
Aph1b
Ap1g1
Nrbf2
Timm13
H4bc24
H2bc23
H2ac24
H2ac23
Ube2j2
Cebpa
Med17
Mknk2
Txnl4b
Dhx38
Ptpn14
Atp5g1
Kdsr
Ss18l1
Psma7
Pmepa1
Kifc5b
Ttll10
Cpsf1
Vps26c
Rab21
Hspa5
Ireb2
Nomo1
Abcc6
Cox18
Dhx33
Jpt2
Klf7
Kbtbd3
Aasdhppt
Arid3b
Zmynd8
Stx16
Spring1
Rnft2
Slc25a25
Clptm1
Vwa1
Mafa
Rab40c
Smim38
Srd5a1
Nsun2
Tacc1
Ssbp2
Snrnp200
Btbd11
1810024B03Rik
Ier5
Ube2f
Sh3gl1
Chaf1a
Rbx1
Rad23b
Gm51425
Ndufs7
Ric8b
Nlrp10
Eif3f
Smim14
Tubg1
Retreg3
Cst6
Clasp2
Saysd1
Cirbp
Cwc22
Mllt11
Cdc42se1
Rin2
Plekhh2
Vapa
Tut7
Lsr
Fam187b
Tex2
Pradc1
Cct7
Tmed2
Ier5l
Yipf2
Timm29
Thap12
Trib1
Calr
Sun1
Commd1
Usp53
Smc6
Gen1
Ppat
Paics
Stt3a
Nedd4
Unkl
Ubald1
Mindy2
BC003965
Fem1b
Adamts19
Wdr36
Lancl2
Ufl1
Gm3739
Khdrbs1
Sh2d5
Mrpl1
Cdk11b
Ddx20
Otud6b
Mtres1
Ppp2r5a
Mrpl44
Hnrnpl
Stag1
Setd3
Mbnl2
Ccnk
Atp10a
Ing1
Atf2
Cacybp
Supt4a
Ggct
Upf1
Nvl
Plag1
Dst
Chmp5
Bag1
Mfsd4b4
Gas1
Ppwd1
Cenpk
Atg2a
Lsm14b
Eea1
Phf12
Oat
Tram1
Parp6
Nudt9
2310057M21Rik
Hdlbp