ChIP-Atlas: Target genes

Potential target genes for Hdac3

Query protein: Hdac3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX14674625 | Brown adipose tissue
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Hdac3's Target genes

◢ Hdac3: Average

◢ SRX2599799: 3T3-L1

◢ SRX2599800: 3T3-L1

◢ SRX2599801: 3T3-L1

◢ SRX2599802: 3T3-L1

◢ SRX6871352: 3T3-L1

◢ SRX6871353: 3T3-L1

◢ SRX6871354: 3T3-L1

◢ SRX17156728: Bone Marrow Cells

◢ SRX17156729: Bone Marrow Cells

◢ SRX17156730: Bone Marrow Cells

◢ SRX17156731: Bone Marrow Cells

◢ SRX21934344: Brown adipocytes

◢ SRX14674610: Brown adipose tissue

◢ SRX14674620: Brown adipose tissue

◢ SRX14674621: Brown adipose tissue

◢ SRX14674622: Brown adipose tissue

◢ SRX14674623: Brown adipose tissue

◢ SRX14674624: Brown adipose tissue

◣ SRX14674625: Brown adipose tissue

◢ SRX14674626: Brown adipose tissue

◢ SRX1890321: Brown adipose tissue

◢ SRX1890322: Brown adipose tissue

◢ SRX3284078: Dorsal root ganglia

◢ SRX3284079: Dorsal root ganglia

◢ SRX3284080: Dorsal root ganglia

◢ SRX3284081: Dorsal root ganglia

◢ SRX3284082: Dorsal root ganglia

◢ SRX3284083: Dorsal root ganglia

◢ SRX3284084: Dorsal root ganglia

◢ SRX3284085: Dorsal root ganglia

◢ ERX2789780: ES cells

◢ ERX2789782: ES cells

◢ ERX2789783: ES cells

◢ ERX2789784: ES cells

◢ ERX2789785: ES cells

◢ ERX2789786: ES cells

◢ SRX4887836: ES cells

◢ SRX4887837: ES cells

◢ SRX4887838: ES cells

◢ SRX4887839: ES cells

◢ SRX1158925: Hippocampus

◢ SRX1158926: Hippocampus

◢ SRX1158927: Hippocampus

◢ SRX1722785: Hippocampus

◢ SRX1722787: Hippocampus

◢ SRX100289: Liver

◢ SRX100290: Liver

◢ SRX100291: Liver

◢ SRX100292: Liver

◢ SRX100293: Liver

◢ SRX2039594: Liver

◢ SRX2039595: Liver

◢ SRX2039596: Liver

◢ SRX2039597: Liver

◢ SRX2039598: Liver

◢ SRX2039599: Liver

◢ SRX206481: Liver

◢ SRX206483: Liver

◢ SRX2375597: Liver

◢ SRX2375598: Liver

◢ SRX2375599: Liver

◢ SRX2375603: Liver

◢ SRX2375604: Liver

◢ SRX2375609: Liver

◢ SRX2375610: Liver

◢ SRX5543268: Liver

◢ SRX5543269: Liver

◢ SRX5543270: Liver

◢ SRX5543271: Liver

◢ SRX5543272: Liver

◢ SRX5543273: Liver

◢ SRX679440: Liver

◢ SRX679441: Liver

◢ SRX679442: Liver

◢ SRX679443: Liver

◢ SRX997769: Liver

◢ SRX997770: Liver

◢ SRX997771: Liver

◢ SRX997772: Liver

◢ SRX997773: Liver

◢ SRX997774: Liver

◢ SRX997775: Liver

◢ SRX997776: Liver

◢ SRX9843666: Lung cancer

◢ SRX9843667: Lung cancer

◢ SRX9843668: Lung cancer

◢ SRX9843669: Lung cancer

◢ SRX9843285: Lung tumors

◢ SRX9843286: Lung tumors

◢ SRX9843287: Lung tumors

◢ SRX9843288: Lung tumors

◢ SRX105109: Macrophages

◢ SRX105110: Macrophages

◢ SRX22541700: Macrophages

◢ SRX22541701: Macrophages

◢ SRX22541702: Macrophages

◢ SRX22541703: Macrophages

◢ SRX5007209: Macrophages

◢ SRX5007210: Macrophages

◢ SRX897073: Macrophages

◢ SRX9702016: Macrophages

◢ SRX9702017: Macrophages

◢ SRX9702018: Macrophages

◢ SRX9702019: Macrophages

◢ SRX9702020: Macrophages

◢ SRX9702021: Macrophages

◢ SRX9702022: Macrophages

◢ SRX9702023: Macrophages

◢ SRX1655669: Pro-B cells

◢ SRX1655670: Pro-B cells

◢ SRX1655671: Pro-B cells

◢ SRX1655672: Pro-B cells

◢ SRX1668641: Quadriceps Muscle

◢ SRX1668642: Quadriceps Muscle

◢ SRX1668643: Quadriceps Muscle

◢ SRX13365787: RAW 264.7

◢ SRX13365791: RAW 264.7

◢ SRX13365795: RAW 264.7

◢ Hdac3: STRING

Cdkn1a
Polr2a
Sde2
Gramd1b
Nme1
Mrpl44
Pomp
Asmt
Sspn
Socs2
H4c3
Sirt1
Gm3488
Junb
Hjurp
A730008H23Rik
Nabp1
Mettl25
Ccdc59
Kansl3
Uspl1
Ppdpf
Itgb1
Comtd1
Irf2
Htra2
Cltc
Utp3
Tob1
Ctla2a
Gadd45a
Med4
Ctla2b
Pex3
Adat2
Ptp4a2
Taf4
Ctnnb1
Btg1
Adprhl2
Atf3
Gm3448
Gm3417
Tcte3
Ermard
Irak2
Kat6a
BC005537
Calm1
Stx16
Gins4
Vta1
Mrpl39
Snx18
Srsf7
Ciao3
H3f3b
Ddx5
Cep95
Hspa8
Myo18a
Nsfl1c
Nsun6
Arl5b
H2ac18
H2ac19
H3c15
H3c14
Klf2
Mob4
Fkbp1a
Rpl21
Knl1
Spty2d1
Vps13d
Opa1
Ube2j2
Rusc2
Prmt5
P4ha1
Nrep
Kifc1
Sh2d3c
Eps15
Thrap3
Rgcc
Ccny
Isy1
Fam149b
Ecd
Ublcp1
Rpl29
Wsb1
Polr3f
Dzank1
Med18
Fam124b
Gorasp2
Rps17
Zhx3
Calm2
Gdi2
Dcp1a
Trp53rkb
Ppip5k2
Gin1
Nfat5
Srsf3
Podxl
Tab1
Nuf2
Cirbp
Mcl1
Piezo1
Rpl27
Ep400
Med23
Rhob
Dnajc16
Zfand5
Sertad1
Mtmr14
Gm13285
Gm13290
Gm13289
Gm13288
Galk2
Cops2
Usp47
Tubb4b
Rpl3
Tmem135
Nhlrc3
Fzd4
Proser1
Rbm34
Bcl6b
Mterf1a
Mcf2l
Fmnl3
Rps29
Egfl7
Hes1
Slc5a3
Mrps6
Zfp317
Adrm1
9030025P20Rik
Chordc1
Ccnl1
Arl8b
Fam227b
Dtwd1
Mpp7
Rps20
C2cd5
Mrpl1
Sh3glb1
Mapk1ip1l
Pafah2
Rpl23
Mvd
Pcdh12
Gm3435
Ddx18
Zranb2
Nudt15
Smg7
Tchp
Cdkn2aipnl
Arhgap31
Rb1cc1
Haspin
Nup54
Polr3e
N4bp2
H3f3a
Hspa5
C1qbp
Cpsf1
Cilk1
Slc25a38
Jun
Dus1l
Ptcd2
Mrps27
Eif4a1
Rsrp1
Spink10
Fbxo38
Rapgef1
Maz
Tcf4
Nus1
Gm3667
Mrps16
Kdm3b
Rbm39
Gtf2b
Btbd8
Vti1b
Klhdc4
Ankrd11
Sf3a3
Dffb
Cep104
Gm10406
Dhx8
Arih2
Commd2
Synm
Tnfaip3
Fbxw2
Ccn1
Trappc3
Sod1
Pih1d2
Nkapd1
Chd9
Trmu
Prkcsh
Ccdc151
H4c14
Agfg1
Camsap2
Denr
Dclre1b
Ap4b1
Cops7a
Rpl5
Trmt11
Tada3
Arpc4
Abca1
Med6
Eef1a1
Myl12a
Tbck
Aimp1
Ube2q1
Cep120
Entpd1
Tctn3
Mphosph9
2810006K23Rik
Ptprb
Pdap1
Bud31
Dusp1
Ubb
Ints14
Arl4a
Arl4d
Aaas
Mrpl21
Ighmbp2
Atf4
Polr2j
Drg2
Aars2
Tmem203
Ndor1
Actb
Pdss1
Acer2
Sdhaf3
Mettl23
Tcim
Tesk1
Kdm1a
Btg2
Mrps31
Dnttip2
Klhl21
Psmg3
Depp1
Tsfm
Uros
Bccip
Arntl
Xpnpep3
St13
Snrpd1
Zfp560
Sf3b1
Pak1ip1
Gtf2a1
Rab33b
Tcp11l2
Gm3500
Setdb1
Mrpl12
Insig1
Slfn5
Gabpb2
Klhl24
Phlda1
Dnajb1
Rnf7
Mylip
Sh3bp5
Pigo
Arhgap27
Ap4e1
Rer1
Morn1
Cdk13
Erlin2
Arid5a
Dhx33
Rps6
Prdx1
Fth1
Zfp784
Ipo13
Rab12
Rbm25
Lims2
Tmem14a
Amz2
Pbld2
Hnrnph3
Gucd1
Snrpd3
Glul
Syn2
Rgl2
Smg8
Slc10a6
Pxn
Coq5
Zc3h10
Spg11
Stam
Slc9a1
Dpy19l4
Cul3
Ccdc107
Pigm
Tbpl1
Etv6
Mrpl20
Gm13287
Znfx1
Cnnm2
Sqstm1
Srsf2
Mfsd11
Cited2
Fitm2
Ddx47
Mcc
Rabgef1
Gpx1
Polg
Tob2
Rbks
Babam2
Rps12
Ncdn
AU040320
Slc35e2
Raf1
Med7
Itpr1
Tatdn3
Nsl1
Gm3411
Gmfb
Zswim6
Rps19bp1
Nufip2
Dync1li2
Skil
Srsf1
Trmt10c
Ddx24
Calm3
Zc3h11a
Zbed6
Septin7
Ilf2
Arl15
Psmb3
Vhl
Lsm4
Dnaja1
Wdr25
Wars
Kifc5b
Ndufa10
Arrdc2
Ssrp1
Cdc42
Zfp868
Gtf3c4
Ddx31
Snrpc
Tbl1xr1
Cdiptos
Cdipt
Rap2a
Ube2d3
Rbm8a
Grk5
Dgat2
H2-K1
Fus
Trp53
Wrap53
Sgk1
Eif4e2
Mtg1
Fos
Mterf1b
Tbc1d7
Ulk2
Cstf1
Aurka
Ddx20
Ep300
Nedd9
Taf12
Flvcr1
Cd164
Ahcyl1
Cnot10
Rpl15
Nkiras1
Get1
Pofut2
Mtres1
Cenpu
Mtdh
Asb6
Scrib
H4c4
Hsp90aa1
Scnn1g
Kctd5
Pnrc1
Tie1
Sec31a
Cacybp
Bnip2
Calr
Ccdc71
Klhdc8b
Rfx3
Nfe2l2
Trio
Rpl10a
Cfap298
Usp4
Clic4
Ubxn1
Rint1
Fchsd2
Ciz1
H2ax
Nup85
Atp6v0c
Elf1
Wbp4
Pcna
Phrf1
Ndufa9
Ifrd1
Kdm5a
Errfi1
Wdr92
Pno1
Ago1
Rbbp6
Ubc
Ndufs2
Mrpl30
Mitd1
Zfp622
Gpd2
B4galt7
Tor4a
Mtf2
Rab1a
Pde4b
Fra10ac1
Pnp
Tcea1
Trpm3
Eif3g
Ubl3
Dhx16
Ldha
Gtf2f1
Klhl20
Tmem182
Hspb1
Trim65
Arhgef37
Rpl7a
Med22
Snx14
Becn1
Gar1
Fyco1
Tbkbp1
Ddit4
Tcf12
Cenps
Zc3h4
Acp2
Rad1
Brix1
Dcaf12
Avl9
Nob1
Ndufs7
Nelfa
Uchl5
Ro60
Crls1
Virma
Zfp119a
Usp20
BC005624
Tma16
Otud7b
Ptpn21
Fam133b
Khdrbs1
Vcl
Cdc42ep1
Ndufb7
Mis18bp1
Dmap1
Eif2s1
Atp6v1d
Ap1g1
Tmed2
Taf13
Agbl5
Mesd
Ccdc126
Sppl2a
Zfp846
Tlnrd1
Supv3l1
Pgrmc1
Sh3gl1
Mrpl34
Abhd8
Usp16
B2m
Sbf2
Mettl9
Nptn
Ndufs4
Krcc1
Tm9sf4
Tspan13
Ube3b
Kctd10
Islr2
Trim25
Sowahc
Septin10
Rps13
Dnm2
Ddx41
Sphk2
Nop14
Grk4
Rpl18
Tut7
Ipo4
Kmt2c
Atg101
Gfm1
Zfp568
Zdhhc7
Rptor
Stat3
Slc39a13
Rpl9
Lias
Srsf5
Psmd12
Ddost
Ets2
Nudt5
Cdc123
Ier2
Fbxw7
Abhd4
Dad1
Zcwpw2
Azi2
Ints13
Fgfr1op2
Tdp2
Acot13
Ythdf3
Ccdc110
Tns2
Vps18
Prkce
Tmem222
Arnt
Sacm1l
Ints7
Dtl
Ifngr1
AA467197
Exosc4
Ubac2
Stoml2
Fcho2
Adnp
Bhlhe40
Jund
Srsf4
Homer1
Ptpn2
Cpeb4
Rdm1
Hspa4
Srd5a3
Psmb2
Arpc3
Gpatch8
Top3b
Stn1
Suds3
Vps4a
Crbn
Amotl2
Cox5a
Hnrnph1
Klhl18
Kif9
Mat2a
Dpp8
Gm13275
Phactr4
Nog
Crem
Sass6
Akap7
Cox7a2
Rps3a1
Hbs1l
Pfkfb3
Nfkbiz
Lrrc59
Hnrnpa2b1
Cbx3
Wwp1
Smg9
Rccd1
Gm3752
Man1a
Ahdc1
Gale
Cbl
Tnrc6c
Hipk1
Pcf11
B9d1
Wwox
Rpl37
Cct4
Usp30
Vdac2
Polr2e
Rpl38
Esyt2
Tut1
Hspa1b
Arid1a
Tmem65
Urgcp
Slc35f5
Rpp14
Htd2
Tnpo3
Mff
Spry1
Ccdc57
Ankle1
Sinhcaf
Dnaja4
Vegfa
Id1
Saal1
Rpl26
Prex2
Pde8a
Zfp212
Amd2
Amd1
Gnb2
Ftl1
Vps25
Lsm14a
Ptpru
Tomt
Lamtor1
Utp14b
Acsl3
Polr3b
Naca
Tuba1b
Fasn
Cryzl2
Gm13272
Psmd3
Pcbp2
Txnip
Cstf2t
Sf3b2
Cebpa
Tpm1
Ndufa12
Tor1b
Nle1
Ythdf2
Ctbs
Yaf2
Tex14
Zfpl1
Cdca5
Diaph1
Hspa1l
Hspa1a
Rab7
Rpl31
Lyl1
Rad51c
Zfp869
Dgkh
Ube2i
Rasip1
Slc36a1
Srp19
Srr
Smg6
Ppp2r5a
Rplp0
Nr4a1
Ppp2r5b
Csnk1d
Cox20
Tssc4
Ing1
Sap18b
Sap18
Hsp90ab1
Mrpl58
Chchd1
Trappc9
Zfp113
Shoc2
Bbip1
Epn1
Sdad1
Sgms1
Cd47
Nmnat1
Lzic
Arhgef12
Dnajc24
Gls
Wtap
Thg1l
Faf1
Trp53rka
Srp54c
Srp54b
Leng8
Rbm17
Abcf2
0610012G03Rik
Ncbp2
Dctn1
Uba2
Ap2s1
Gpn3
Fam216a
Snrpe
Sft2d1
Bcl2l1
Inpp5e
Ppp6r3
Lyrm4
Fars2
Trappc5
Gm3264
Gm3696
Zmym2
Usp36
Atg16l1
Ppp6c
Rasal2
Snrnp200
1810024B03Rik
Slain2
Clk1
Erap1
Pigq
Nip7
Cog8
Elmod2
Oxnad1
Dph3
Mrps30
Fmc1
Nipsnap2
Foxj3
Frg2f1
Zfp661
Extl3
Mrps5
Ier5l
Mief1
Prkab1
Tomm22
Zfp36l1
Impdh2
Hexim1
Sys1
Zfp119b
Rnf214
Pcsk7
Tra2a
Slc20a1
Ltv1
Gda
Zdhhc1
Leprotl1
Ppp4r3b
Ddx46
Ier5
Thoc1
Nol7
Lbh
Mapkapk2
Zfp36l2
Nolc1
Pparg
Zyx
Rhog
Smim12
Srpr
Foxred1
Dnajc11
Rpl17
Tgds
Mrps36
Casz1
Zfp36
Tmem101
Pemt
Rps7
Skp1
Zfat
Txndc9
Eif5b
Itfg2
Ext1
Smarce1
Dusp6
Kxd1
Psma6
Fam53c
Tmem30a
Zfp1
Tmed5
Ccdc18
Rnf187
S100a10
Atxn7l2
Asb7
Tgfb3
Fam171a1
Eif1
Stat1
Ints6
Prr14l
Nol8
Cenpp
Ptma
Banp
Srcap
Cdk9
Ctnnd1
Rabep2
Dhx40
Taco1
Eif5
Rpia
Eef2
Wdr27
1600012H06Rik
Abhd18
Zfp62
Med13
Nrd1
Hspa9
Id3
Stk35
Nipbl
Setd4
Ywhae
Arid4a
Yipf2
Timm29
Adk
Ap3m1
Serinc3
Rps6ka2
Srsf9
Map4
Txn2
Ddx23
Sem1
Canx
Myo1d
Tiparp
Tfrc
Spag9
Ap1m1
Pdk4
Eloa
Pygo2
Nsrp1
Ccni
2010109A12Rik
Ndufc1
Ankrd2
Elk4
Lig4
Tmem14c
Fbf1
Abhd13
R3hcc1l
Ap5z1
Cluh
Idh1
Tfb2m
Cnst
Gosr2
Trir
Hps5
Gtf2h1
Usp19
Ndufaf5
Esf1
Tmem33
Aurkaip1
Dpep2
Snrpb2
Rhot1
Rnaset2b
Nucb1
Rnaset2a
Taf9
Rad17
Ak6
Nsmce4a
Pds5b
Ext2
Lrrc8a
Pradc1
Cct7
Pcnp
E2f4
Cdk5rap2
Ppm1a
Mef2a
Pcid2
Cul4a
Rps14
Jdp2
Epas1
Secisbp2
Gm13276
Gtf2h2
Lancl2
Chsy3
Ccnt1
Hnrnpf
Mapk14
Tmem41b
Rangap1
Ercc3
Ppard
Mtmr10
Tmem39a
Stk19
Dxo