ChIP-Atlas: Target genes

Potential target genes for Hdac3

Query protein: Hdac3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9843668 | Lung cancer
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Hdac3's Target genes

◢ Hdac3: Average

◢ SRX2599799: 3T3-L1

◢ SRX2599800: 3T3-L1

◢ SRX2599801: 3T3-L1

◢ SRX2599802: 3T3-L1

◢ SRX6871352: 3T3-L1

◢ SRX6871353: 3T3-L1

◢ SRX6871354: 3T3-L1

◢ SRX17156728: Bone Marrow Cells

◢ SRX17156729: Bone Marrow Cells

◢ SRX17156730: Bone Marrow Cells

◢ SRX17156731: Bone Marrow Cells

◢ SRX21934344: Brown adipocytes

◢ SRX14674610: Brown adipose tissue

◢ SRX14674620: Brown adipose tissue

◢ SRX14674621: Brown adipose tissue

◢ SRX14674622: Brown adipose tissue

◢ SRX14674623: Brown adipose tissue

◢ SRX14674624: Brown adipose tissue

◢ SRX14674625: Brown adipose tissue

◢ SRX14674626: Brown adipose tissue

◢ SRX1890321: Brown adipose tissue

◢ SRX1890322: Brown adipose tissue

◢ SRX3284078: Dorsal root ganglia

◢ SRX3284079: Dorsal root ganglia

◢ SRX3284080: Dorsal root ganglia

◢ SRX3284081: Dorsal root ganglia

◢ SRX3284082: Dorsal root ganglia

◢ SRX3284083: Dorsal root ganglia

◢ SRX3284084: Dorsal root ganglia

◢ SRX3284085: Dorsal root ganglia

◢ ERX2789780: ES cells

◢ ERX2789782: ES cells

◢ ERX2789783: ES cells

◢ ERX2789784: ES cells

◢ ERX2789785: ES cells

◢ ERX2789786: ES cells

◢ SRX4887836: ES cells

◢ SRX4887837: ES cells

◢ SRX4887838: ES cells

◢ SRX4887839: ES cells

◢ SRX1158925: Hippocampus

◢ SRX1158926: Hippocampus

◢ SRX1158927: Hippocampus

◢ SRX1722785: Hippocampus

◢ SRX1722787: Hippocampus

◢ SRX100289: Liver

◢ SRX100290: Liver

◢ SRX100291: Liver

◢ SRX100292: Liver

◢ SRX100293: Liver

◢ SRX2039594: Liver

◢ SRX2039595: Liver

◢ SRX2039596: Liver

◢ SRX2039597: Liver

◢ SRX2039598: Liver

◢ SRX2039599: Liver

◢ SRX206481: Liver

◢ SRX206483: Liver

◢ SRX2375597: Liver

◢ SRX2375598: Liver

◢ SRX2375599: Liver

◢ SRX2375603: Liver

◢ SRX2375604: Liver

◢ SRX2375609: Liver

◢ SRX2375610: Liver

◢ SRX5543268: Liver

◢ SRX5543269: Liver

◢ SRX5543270: Liver

◢ SRX5543271: Liver

◢ SRX5543272: Liver

◢ SRX5543273: Liver

◢ SRX679440: Liver

◢ SRX679441: Liver

◢ SRX679442: Liver

◢ SRX679443: Liver

◢ SRX997769: Liver

◢ SRX997770: Liver

◢ SRX997771: Liver

◢ SRX997772: Liver

◢ SRX997773: Liver

◢ SRX997774: Liver

◢ SRX997775: Liver

◢ SRX997776: Liver

◢ SRX9843666: Lung cancer

◢ SRX9843667: Lung cancer

◣ SRX9843668: Lung cancer

◢ SRX9843669: Lung cancer

◢ SRX9843285: Lung tumors

◢ SRX9843286: Lung tumors

◢ SRX9843287: Lung tumors

◢ SRX9843288: Lung tumors

◢ SRX105109: Macrophages

◢ SRX105110: Macrophages

◢ SRX22541700: Macrophages

◢ SRX22541701: Macrophages

◢ SRX22541702: Macrophages

◢ SRX22541703: Macrophages

◢ SRX5007209: Macrophages

◢ SRX5007210: Macrophages

◢ SRX897073: Macrophages

◢ SRX9702016: Macrophages

◢ SRX9702017: Macrophages

◢ SRX9702018: Macrophages

◢ SRX9702019: Macrophages

◢ SRX9702020: Macrophages

◢ SRX9702021: Macrophages

◢ SRX9702022: Macrophages

◢ SRX9702023: Macrophages

◢ SRX1655669: Pro-B cells

◢ SRX1655670: Pro-B cells

◢ SRX1655671: Pro-B cells

◢ SRX1655672: Pro-B cells

◢ SRX1668641: Quadriceps Muscle

◢ SRX1668642: Quadriceps Muscle

◢ SRX1668643: Quadriceps Muscle

◢ SRX13365787: RAW 264.7

◢ SRX13365791: RAW 264.7

◢ SRX13365795: RAW 264.7

◢ Hdac3: STRING

Nr4a1
Iba57
Klf10
Asmt
Srebf1
Kctd11
Mtmr14
Ilf3
Acaa2
Mlycd
Etnk2
Sde2
Setx
Polr3h
Socs2
Spata33
Chmp1a
Arntl
Brpf1
Nme1
Kbtbd7
Per3
Zfp706
Atf3
Rarg
Opa3
Mms19
Ubtd1
Etfa
Abhd18
Sbno1
Tfrc
Slc25a20
Actn4
Wrnip1
Lsm14b
Gm14137
Fxr2
Il23a
Supt4a
Ifi204
Eci2
Trib1
Hif1an
Tcf4
Rin1
Gabarapl2
Eif4b
Serf2
Zfp213
Gga1
Ncapg2
Puf60
Rab8a
H2-K1
Zbtb10
Rer1
Morn1
Slc25a45
Ndufv1
Rab3gap2
Zfp740
Ankrd1
Faf1
1110002E22Rik
Ccnt1
Mrpl45
Echdc3
Alkbh7
Cbl
Nolc1
Sfr1
Seh1l
Klf11
Rnf39
Man1b1
Uck1
Dgat1
Nfkbia
Xpnpep3
St13
Gm3448
Gm3417
Tcte3
Ermard
Mbtps1
Ptp4a2
Ankrd40
Tmem229b
Cxcl10
Azin1
Otud1
Ndrg1
Gtf2f1
Fcho2
Cd2ap
Cfap20
Hyal1
Gprc5a
Zfp113
Arrdc2
Mcrs1
Limk1
Nr4a2
Dhx8
Golga5
Napa
Cdk4
Tns1
Rufy4
Denr
5031439G07Rik
Pold3
Dusp1
Phykpl
Ncaph2
Lmf2
Plekhf2
Pabpc1
Naa40
Gxylt1
Scaf11
Mmaa
Tarbp2
Krtap1-5
Tomt
Lamtor1
Zfp623
Fam107b
Rnf166
Ctu2
Bcas3
Cnot10
Akap1
Lin54
Sgk2
Zbed4
Hinfp
Srebf2
Gpbp1
Edrf1
Yif1b
Ep400
Orc4
Mbd5
Abhd11
Zyx
Fam32a
Map2k2
Fbxo31
Tsku
Gm3776
Rps16
Tomm40
Hjurp
A730008H23Rik
Strada
Kdm2a
Acaa1a
4931428F04Rik
H2-L
H2-D1
Pou2f1
Dph5
Spen
Ankrd24
Kat6a
Irf2bpl
Fam160b1
Tmem65
Bcl2l13
Yipf2
Timm29
Kifc1
Pex16
Klhl9
Hic2
Tom1l2
Drc3
Mlf2
Dclre1b
Ap4b1
Cars
Wdyhv1
Metap1
Fbrsl1
Tmie
Als2cl
Ovol1
Eif1
Sptan1
Sdhb
Ppp2ca
Cox18
Chrac1
Trim37
Usp53
Nrbp2
Fbxl13
Armc10
Phf1
Micall1
Ten1
Acox1
Psmd3
Ist1
Elp5
Ctdnep1
Creld2
Alg12
H3f3b
Trir
Tmco4
Adprh
Rnf38
Btg2
Aspscr1
Sac3d1
Snrpc
Thumpd3
Zfand5
Pcf11
Hspa4
Vapa
Rrm2b
Aaas
Tbc1d14
Ptpn2
Herpud2
Cish
Bnip3l
Ppp1r15a
Plekha4
Zfp119b
Zfp511
Tubgcp2
Polr2a
Gnas
Slc35a4
Apbb3
Serinc3
Trmt2a
Ranbp1
Sh3gl1
Mvd
Prdx1
Fosb
Fzr1
Ubxn1
Usp36
Ticam1
Atg10
Sprr1a
Rad9a
Exosc4
Mief1
Rtn4
Ulbp1
Smarcd2
Ddx41
Hspbp1
Cep63
Anapc13
Tmco6
Emp1
Rela
Zswim4
Dhx35
Nol8
Cenpp
Rab33b
Rab21
Ogfod3
Hexdc
Ccdc84
Ube4b
Gm3435
Utp14b
Acsl3
Eprs
Taf5
Rapgef3
Tsga10
Slc5a6
Atraid
Gdpd5
Ubap2l
4933434E20Rik
Ppm1a
Coro1b
Rel
Ppp1cb
1810037I17Rik
Cdip1
Poldip3
Atp2b1
Prkab2
Zdhhc12
Larp4b
Tmem54
Polr2e
Dennd4b
1190007I07Rik
Vps26c
Isca1
Gar1
Taf6
Cnpy4
Myo1h
Gpn3
Fam216a
Eif3d
Isyna1
Nr1d1
Kif23
Pcnx4
Sdc4
Cdk13
Casp8ap2
Ccnt2
Cdc34
Mrps15
Zfp119a
Cacfd1
Myl6b
Hspe1
Hspd1
Slc25a35
B3gnt3
Fam71e1
Emc10
Uspl1
U2surp
Dohh
Usp2
Wdr27
1600012H06Rik
Smim14
Gorasp2
Lrrc51
Stk19
Dxo
Ranbp3
Hmga1b
Hmga1
Zfp628
Rassf6
Rpl27
Idh1
Tinf2
Dnajc14
Tmem198b
Cdk12
Psmd8
Hspa8
Coa7
Rab5c
Dclk1
Spty2d1
Arhgap12
Coq10b
Mars1
Tob1
Mlst8
Rhebl1
Ankrd55
Tcta
Rhoa
Ptma
Spg7
Dgkz
Frat2
Fermt1
Atp6v0d1
Trappc9
Oga
Zfp438
Nbeal2
Osbpl9
Sfxn2
Arl3
Esrra
Tmem160
Esyt2
Tcf25
Tst
Mpst
Rad18
Krt19
9030025P20Rik
Ccm2
Nudt9
2310022A10Rik
Pld3
Gsta1
Slc35e1
Clcf1
Fbxl21
Homer3
Tmub2
Mtres1
Pygo2
Get4
Ptpn1
Med16
Nudt1
Tbc1d23
Trmu
Usp4
G2e3
Cct2
Pskh1
Zbtb2
Coa3
Cntd1
Ptbp3
Prkag1
Ppp4r3b
Ppp1ca
Abcf1
Tbc1d10c
Gcnt2
Srek1
Osbpl2
Zfp647
Setd5
Sf3b1
Ccar1
Eef1g
Dnajb6
Maff
Odc1
Mrps23
Morc2a
Ruvbl2
Gys1
Csnk1a1
Tnrc6c
Snx11
Pts
Ddx50
Rpsa
Chaf1b
Guk1
Lrrc42
Hspb11
Fosl1
Pdap1
Bud31
Chchd5
Bag3
Egln2
Ypel5
Styxl1
Mdh2
Maml1
Prss22
Hmgn2
Btaf1
Perp
Stx1a
Ap5z1
Ubald1
Ube2n
Syf2
Tfcp2
Ubl7
Pop7
Prr13
Jmjd7
Mal2
Zfp687
Pelp1
Ccdc107
Nup54
Nadk
Eif3h
Rbfox2
Tnfaip3
Ubr4
Ep300
Ythdc1
Qars
Sumo2
Zfp963
Urb1
Gm11563
Arih2
Zc3h10
Lrrc61
Smndc1
Bcl7b
Atp5k
Sdhaf2
Cpsf7
Atf6
Dguok
Chmp5
Bag1
Gtf2a1
Jund
Tnks2
Nr1h2
Yars
S100pbp
Zswim6
Ciao2b
Gfus
Cyp1b1
Hbegf
Tcf19
Cchcr1
Baiap2l1
Shoc2
Bbip1
Fam136a
Hmgxb3
Atg5
Bsdc1
Ubp1
Six5
Carm1
Trim15
Ippk
Pex12
Ube3c
Snx3
Slc25a3
0610010K14Rik
Otub1
Ptpre
B230219D22Rik
Qsox2
Epb41l1
Uck2
Sh3glb1
Hexim2
Pip4p2
Hint3
Ssna1
Anapc2
Lactb2
Kmt2b
Gpbp1l1
Taf6l
Tpt1
Rchy1
Inpp5k
Txnrd1
Nutf2
Psmc4
Lekr1
Uhrf2
Kiz
Rab11b
Auh
Rnf139
Cbx5
Dstn
Sdcbp2
Eif2s1
Atp6v1d
Prcc
Hdac5
Rab6a
Dusp5
Hsp90aa1
Tbl2
Sp1
Entpd7
Coq8b
Naa35
Pik3ca
Arrb2
Tmem129
Tacc3
Slc52a2
Fbxl6
Chp1
Lmna
Errfi1
Uvssa
Exd1
C2cd2l
Fbxo3
4931422A03Rik
Cdkn2d
Tonsl
Zfp707
Cldn3
Eps8l1
Aox1
Ilrun
Abtb1
Zer1
Usp19
Casc3
Tmem199
Poldip2
Rpl37
Tnk2
Dcaf12
Sgf29
Atf7
Cnnm3
Wdr18
Camta1
Vti1b
Aldoa
Hilpda
Arsa
Egr1
Pkmyt1
Isg20
Ets1
Flnc
Mideas
Cyth1
Efcab2
Nfkb2
Il1r1
Agpat2
Nup107
Atg16l2
Trim16
Dcakd
Ptges3
Klhl26
Usp10
Smu1
Czib
Hsdl1
Dnaaf1
Chkb
Nipal3
Hibch
Rheb
Zfand3
Nudt8
Capn10
Kat8
Smarca5
Adpgk
Calr3
Rbx1
Usp20
BC005624
1700030J22Rik
Mthfs
Cdc42
Zfp868
Parp16
Mthfsd
Plekhn1
Etnk1
Atp5g2
Immt
Tomm22
Gpr155
Cpsf1
Ascc1
Anapc16
Hexb
Hyou1
Zmynd15
Unkl
Adgrg1
Fn1
Entpd1
Tctn3
Rnaset2b
Cald1
Ccdc9
Rnaset2a
Pcif1
Marf1
Vps4a
Pum1
Dhx16
Fbxw7
Gpatch8
Tiprl
Tbrg4
Ddx17
Txlna
Map9
Glt28d2
Ebag9
Trpm4
Rbpj
Fbxl3
Ptcd1
Cpsf4
Rpl21
Anxa5
1810062G17Rik
Cutc
Cox15
Eif2b5
Lmbr1l
Vars
D17H6S56E-5
Tsnax
Nbeal1
Rnf216
Add1
Wipi2
Dnajb2
Epg5
Gtf2e2
Efcab14
Fasn
Pdcd6ip
Mphosph9
2810006K23Rik
Zfp318
Fbp2
Rpl29
Isy1
Plekhb1
Spag9
Cyrib
Dnaja1
Zfp672
Wdr47
Tagap1
Safb2
Safb
Gm4861
Dcbld2
Lpar2
Cystm1
Amotl2
Mon1a
Ralgapb
Gm45927
Clk2
Twf1
Vps8
Ptprn
Odaph
Tmed2
Oser1
Ankrd11
Zcwpw1
Mepce
Mrpl20
Bag6
Eftud2
Ccdc103
Gpcpd1
Slain2
Xrcc6
Desi1
Tubgcp6
Dnpep
Mgat1
Atp8b1
Troap
Drg1
Cep55
Gm10639
Rara
Srsf1
Nek11
Aste1
Jak2
Cep85
Cdkn2aip
Polr2f
1700088E04Rik
Mtmr4
Sirt6
Copg1
Ddit3
Tmem147
Zfp959
B3gntl1
Med31
4930563E22Rik
Herc4
Dop1b
H3f3a
Dhx34
Cxcl1
Upf3a
Specc1
Krtap2-4
Htra2
Med23
Srp19
Btg1
Them4
Cdt1
Irf1
Mrpl4
Esyt1
Fdxr
Nup50
Cetn3
Pald1
Castor1
Ddr1
Rabgef1
Pcbp2
Mesd
Ccndbp1
Tlnrd1
Pih1d1
Aldh16a1
Ppp1r8
Cant1
Nampt
Tbc1d22a
Mafa
Aatf
Tgfa
Arpc2
Tbc1d15
Cic
Clptm1l
Zfp24
Iffo2
Pnkd
Letmd1
Hnrnpd
Cers5
Gna11
Lcmt2
Adal
Lrfn4
Pigm
Sf3b2
Mrpl17
Thap7
Rnf44
Sema4b
D2hgdh
Tcf7l2
Cnnm4
Zfr2
Tigit
Crem
Skp1
Rsbn1
Ctsd
Twnk
Mrpl43
Rhbdd3
Ewsr1
Wdsub1
Rnf13
Rbm4b
Mad1l1
Prkca
Aph1c
Acadl
Trmo
P4ha1
Serhl
Raver1
Srcap
Slc20a1
Mfsd4b4
Impa2
Lss
Psap
Eif4g1
Mob4
Nub1
Rnft1
Setd3
Ccnk
Eif4e
Csnk1g2
Prdm4
Txndc11
Dctn6
Aldh9a1
Opn3
Sdf4
B3galt6
Rbm6
Pgam1
Map4k2
Xpot
Specc1l
Slc35e4
Slc38a2
2610507B11Rik
Thbs1
Dtnb
Igsf9
Cbx7
Polg
Vta1
Spg11
Atp6v1c1
Rmc1
Stag1
Psmg1
9130023H24Rik
Armc5
Txn1
Prrc2a
Pkn2
Dtd1
Pofut1
Plagl2
Coa4
Kctd20
Dyrk1b
Picalm
Cuta
Arfgap1
Klf3
Lap3
Slc12a7
Hmbs
Fetub
Lamp1
Amz2
Diaph1
Sirt1
Morc3
Sil1
Ralb
Acvr2b
Gtdc1
Dck
Ogdh
Mrpl54
Mrpl16
Cdk5r1
Gpc1
Celsr1
Ctla2b
Ptgr2
Susd6
Rpl23
Urgcp
Bbs5
Pole4
Xrra1
Spcs2
Ahsa2
Ppm1g
Atad3a
Gcat
Syvn1
L2hgdh
Dmac2l
Trim59
Cnksr1
Cacul1
Phf5a
Aco2
Rcan1
Nup153
Srr
Smg6
Arih1
Ddx5
Cep95
Phlda1
Csde1
Mcm7
Ap4m1
Nsun4
Gatad2a
Glt8d2
Rps8
Cep43
Zfp7
Prxl2c
Ttc21a
Gorasp1
Mif4gd
Pcgf3
Zfp57
Srsf3
Letm2
Pa2g4
Sft2d2
Slc35e2
Ccdc91
Ell
Mia3
Vstm5
Dcaf1
Cltc
Rbks
Babam2
Zpr1
Pnrc1
Taf13
Sart1
Nfat5
Chd1l
Mettl23