ChIP-Atlas: Target genes

Potential target genes for Hdac3

Query protein: Hdac3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1722787 | Hippocampus
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Hdac3's Target genes

◢ Hdac3: Average

◢ SRX2599799: 3T3-L1

◢ SRX2599800: 3T3-L1

◢ SRX2599801: 3T3-L1

◢ SRX2599802: 3T3-L1

◢ SRX6871352: 3T3-L1

◢ SRX6871353: 3T3-L1

◢ SRX6871354: 3T3-L1

◢ SRX17156728: Bone Marrow Cells

◢ SRX17156729: Bone Marrow Cells

◢ SRX17156730: Bone Marrow Cells

◢ SRX17156731: Bone Marrow Cells

◢ SRX21934344: Brown adipocytes

◢ SRX14674610: Brown adipose tissue

◢ SRX14674620: Brown adipose tissue

◢ SRX14674621: Brown adipose tissue

◢ SRX14674622: Brown adipose tissue

◢ SRX14674623: Brown adipose tissue

◢ SRX14674624: Brown adipose tissue

◢ SRX14674625: Brown adipose tissue

◢ SRX14674626: Brown adipose tissue

◢ SRX1890321: Brown adipose tissue

◢ SRX1890322: Brown adipose tissue

◢ SRX3284078: Dorsal root ganglia

◢ SRX3284079: Dorsal root ganglia

◢ SRX3284080: Dorsal root ganglia

◢ SRX3284081: Dorsal root ganglia

◢ SRX3284082: Dorsal root ganglia

◢ SRX3284083: Dorsal root ganglia

◢ SRX3284084: Dorsal root ganglia

◢ SRX3284085: Dorsal root ganglia

◢ ERX2789780: ES cells

◢ ERX2789782: ES cells

◢ ERX2789783: ES cells

◢ ERX2789784: ES cells

◢ ERX2789785: ES cells

◢ ERX2789786: ES cells

◢ SRX4887836: ES cells

◢ SRX4887837: ES cells

◢ SRX4887838: ES cells

◢ SRX4887839: ES cells

◢ SRX1158925: Hippocampus

◢ SRX1158926: Hippocampus

◢ SRX1158927: Hippocampus

◢ SRX1722785: Hippocampus

◣ SRX1722787: Hippocampus

◢ SRX100289: Liver

◢ SRX100290: Liver

◢ SRX100291: Liver

◢ SRX100292: Liver

◢ SRX100293: Liver

◢ SRX2039594: Liver

◢ SRX2039595: Liver

◢ SRX2039596: Liver

◢ SRX2039597: Liver

◢ SRX2039598: Liver

◢ SRX2039599: Liver

◢ SRX206481: Liver

◢ SRX206483: Liver

◢ SRX2375597: Liver

◢ SRX2375598: Liver

◢ SRX2375599: Liver

◢ SRX2375603: Liver

◢ SRX2375604: Liver

◢ SRX2375609: Liver

◢ SRX2375610: Liver

◢ SRX5543268: Liver

◢ SRX5543269: Liver

◢ SRX5543270: Liver

◢ SRX5543271: Liver

◢ SRX5543272: Liver

◢ SRX5543273: Liver

◢ SRX679440: Liver

◢ SRX679441: Liver

◢ SRX679442: Liver

◢ SRX679443: Liver

◢ SRX997769: Liver

◢ SRX997770: Liver

◢ SRX997771: Liver

◢ SRX997772: Liver

◢ SRX997773: Liver

◢ SRX997774: Liver

◢ SRX997775: Liver

◢ SRX997776: Liver

◢ SRX9843666: Lung cancer

◢ SRX9843667: Lung cancer

◢ SRX9843668: Lung cancer

◢ SRX9843669: Lung cancer

◢ SRX9843285: Lung tumors

◢ SRX9843286: Lung tumors

◢ SRX9843287: Lung tumors

◢ SRX9843288: Lung tumors

◢ SRX105109: Macrophages

◢ SRX105110: Macrophages

◢ SRX22541700: Macrophages

◢ SRX22541701: Macrophages

◢ SRX22541702: Macrophages

◢ SRX22541703: Macrophages

◢ SRX5007209: Macrophages

◢ SRX5007210: Macrophages

◢ SRX897073: Macrophages

◢ SRX9702016: Macrophages

◢ SRX9702017: Macrophages

◢ SRX9702018: Macrophages

◢ SRX9702019: Macrophages

◢ SRX9702020: Macrophages

◢ SRX9702021: Macrophages

◢ SRX9702022: Macrophages

◢ SRX9702023: Macrophages

◢ SRX1655669: Pro-B cells

◢ SRX1655670: Pro-B cells

◢ SRX1655671: Pro-B cells

◢ SRX1655672: Pro-B cells

◢ SRX1668641: Quadriceps Muscle

◢ SRX1668642: Quadriceps Muscle

◢ SRX1668643: Quadriceps Muscle

◢ SRX13365787: RAW 264.7

◢ SRX13365791: RAW 264.7

◢ SRX13365795: RAW 264.7

◢ Hdac3: STRING

Ilf3
Amdhd2
Mfsd1
Hexa
Ube2q1
Dpp7
Atp6v0b
Atxn3
Neurl2
Ctsa
Ankrd12
Cdk4
Bax
Zmym6
Lamp1
Zzz3
Dvl2
Washc2
Kdm4c
Zfp507
Clcn7
Rragc
Igf2r
Vps11
Osgep
Apex1
Tomt
Lamtor1
Ten1
Acox1
Atp6v1c1
Trmo
Pip4p1
Slc35a5
Atg3
Ap5z1
Tpp1
Mcoln1
Gnpda1
Hps1
Wdr81
Napa
Zfp710
Spns1
Srsf2
Mfsd11
Gns
Mthfr
Clcn6
Sppl3
Atp6v0d1
Hps5
Gtf2h1
Gba
Dnajc13
Zfp607b
Nudt9
Cln3
Rcbtb1
Supt4a
Mtdh
Tom1
Ube2b
Ctsd
Sumf1
Lztfl1
Asmt
Scyl1
Ptprs
Med28
Uvrag
Nup188
Dolk
AW549877
Wbp2
Cuta
Cep162
Nagpa
Stau2
Rad9a
Arhgap12
Orai2
Cops7a
Thrap3
Trpm7
Sspn
Galm
Slc36a1
Wipf2
Natd1
Adnp2
Gtf2a1
Cnppd1
Retreg2
Rmnd1
Armt1
Zbtb40
Washc5
Nsmce2
Rnasek
Zfp655
Vps33a
Crebrf
Commd9
Commd4
Khdrbs1
Atp6v1h
Gpr19
Srek1
Dyrk1b
Eif4g1
Zfp292
Slc25a44
Grn
Ccnyl1
Scamp3
Lamtor4
Iba57
Ccdc9
Cttnbp2nl
Top3a
Smcr8
Slc38a7
Crebzf
Vamp3
Pcdh17
Senp7
Arid1b
Gabarap
Cd164
Ccdc186
Wdsub1
Gria1
Supv3l1
Bloc1s1
Txlna
Sgo1
Ubn1
Glyr1
Ubap2l
4933434E20Rik
Slitrk3
Sgta
Gid4
Cyren
Foxred2
Zfp119b
Ctps
Serf2
Nr1d2
Psmc3
Zfp119a
Cul5
Marchf8
Rmc1
Exd2
9130401M01Rik
Pemt
Ypel5
Ttc21a
Gorasp1
Zfp84
Unc45a
Ppp2r5c
Psmd3
Herpud2
Rcc1l
Prkar1b
Dnaaf5
Shpk
Ctns
Myo5c
Dcaf12
Slc39a7
Rxrb
Ncl
Sumo3
Dnajc11
Commd3
Zcchc9
Cand2
Arl2
Afg3l2
Mrm3
Glod4
Lipt2
Ddx59
Elovl5
Tpcn2
Nptn
Adam10
Npm1
Golga5
Smdt1
Tyr
Tpt1
Rps29
Sae1
Zfp653
Ppp6r1
Ifrd1
Spg21
Map2k2
Snapin
E4f1
Polr3d
Cry1
Cpne4
Hif1a
A430005L14Rik
Tef
Cdk19
Creb1
Phf20
Rbpj
Urgcp
Hsp90aa1
Safb2
Safb
Pink1
Eif1
Slc35b2
Neu1
Dhx35
Mtx1
Thbs3
Gnas
Pofut2
Dnajc16
Scrt2
Dgat2
Cluh
Tbcel
Cep192
Khdc4
Slc15a4
Esco1
Rida
Pop1
Immt
Tmem41b
Rbm14
Gm21992
Mapk8ip3
Tmem59l
Stt3b
Serpinb6a
Ripk1
Hpf1
Fam13b
Hnrnpl
Mrpl2
Klc4
Mcph1
Abcf1
Hlcs
Acot2
Eif2s1
Atp6v1d
Atg10
Susd6
Rheb
Chrac1
Ino80e
Hirip3
Zbtb49
Lyar
Snrpe
Tsg101
Rab8b
Vps37a
Cnot7
Mettl1
Eef1akmt3
Armc9
Ddhd2
Smarcd1
Gapvd1
Kifc1
Vapa
Sharpin
Maf1
Nup133
Gtf2ird2
Eif3b
Mettl23
Rabl6
Hdhd5
Mms19
Ubtd1
Dap
Phyhipl
Snrpa
BC024978
Zfp959
Mrpl23
Oasl1
Adprhl2
Med9
Qsox2
Hsdl1
Dnaaf1
Vac14
Zfp784
Zfp3
Zfp622
Morc2a
Kif11
Tm9sf1
Ilf2
Pbld2
Hnrnph3
Stx4a
Ppm1a
Idh2
Prep
Akap10
Wipi2
Kansl2
Smim14
Ube2cbp
Cdc20
Sec24c
Ppia
Slc26a2
Cutc
Cox15
Uba6
Ccdc171
Per2
H2ac12
H2bc12
Setx
Vps26c
Rpn1
Arcn1
Ndel1
Ptdss1
Mterf3
Erlin2
Psme3
Slc30a9
Fem1b
Cfap74
Tra2b
Cbx1
Zfp672
Rab1a
Nagk
Ssr1
H3f3b
Zfp513
Tarbp2
Eef1e1
Rgs7
Klf10
Senp8
Myo9a
Rae1
Cacul1
Slbp
Necap1
Cc2d1b
Pdlim7
Fam118a
Tubb4b
Mfsd5
Naa40
Alas1
Ybx1
Tnpo2
Zfp428
Map9
Cenpu
Ppif
Hjurp
A730008H23Rik
Arf6
Klhl12
Nsun6
Arl5b
Slc5a6
Atraid
Fbl
Ciart
Ptpa
Crat
Sart1
Paxip1
G6pc3
Fcna
Nme1
Pdp2
Gbp7
Dhx8
Alkbh7
Polg
Cdkn1a
Gramd1b
Adcy10
Rhobtb1
Socs2
Arntl
Tmcc3
Abca1
Tubb2a
Prkcsh
Ccdc151
Wrnip1
Dcaf1
Snrpc
Nr1d1
C3
Tmem171
Tnfaip3
Dpp9
Utp3
Rab5if
Ap5s1
Ech1
Sde2
Cbs
Zfp719
Naa35
Apoa2
Fam71e1
Emc10
Gbp10
Rpl27
Mrpl1
Spen
Ctla2b
Repin1
Ppdpf
Mtmr14
Aox1
Cltc
Pnpla3
Ahcyl1
Pla2g12a
Polr2a
Med4
Lpp
Spty2d1
Trib1
Rffl
Kbtbd7
Acaa1a
Cox20
Htra2
Adh1
Xrcc1
Rnase10
Denr
Ddx20
Coq8a
Myo18a
Dusp6
Aaas
Frat1
Ublcp1
Med23
Cst3
Nr6a1
Slc6a12
Rabgef1
Ifnar1
Trappc9
Irgm2
Tob2
Arsg
Sh3glb1
Tbl1xr1
Kxd1
Maz
Rara
A630076J17Rik
4931406C07Rik
Srebf1
Ube2j2
Mrpl44
Rbm25
Coq10b
Sh3gl1
Cep120
Nfkbia
Ptgr2
Ilrun
Idh1
Uspl1
Gatd1
Clp1
Tchhl1
Lgals3bp
Vta1
Arih2
Ccdc107
H4c3
Cox18
Gorasp2
Mrpl34
Myd88
H2-Q9
H2-Q7
Ubxn1
Gm3448
Gm3417
Nup54
Dlat
Tmem53
Lemd2
Rbks
Babam2
Eapp
Zfp113
Osgin1
Nuf2
Rdm1
Zbtb21
Polr2e
Clec2d
Slx4ip
Mkks
Dyrk1a
Gbp6
Tcf4
Acadm
Ist1
Rchy1
Tiparp
Hal
St6gal1
Cnot10
Dhx16
Med6
Rptor
BC003965
Mgst1
Mlf2
Stat3
Rpl29
Dnajb12
Ptp4a2
Kctd5
Nip7
Cog8
Elmod2
Ehd1
Cd276
Tfrc
Ccny
Stx16
Tcte3
Armh1
Rarb
Psap
Wdfy2
U2surp
Tomm40l
Gpn3
Fam216a
Gclm
Tatdn2
Arhgap23
Selenop
Pomp
Gtpbp4
Ahctf1
Dbi
3110009E18Rik
Ndufs2
Gstm7
Epg5
Ints10
Nudt15
Acnat2
Ccnt1
Zfp36l2
Cd300lf
H2-Q8
H2-Q6
Ptpn12
Por
Hpn
Mrpl30
Mitd1
Dnttip2
Dcp1a
Kifc5b
Ptk2
Hif1an
Slc39a13
Crem
Ift46
Rrn3
Prkag1
Fblim1
Flot1
Hexim2
Il1rn
Gmfb
Phb2
Emg1
Krr1
H2-L
H2-D1
Exosc4
Ap1g1
Spink10
Fbxo38
Ap4e1
Fam210a
Isy1
Mief1
Slc39a14
9030025P20Rik
Tspan4
Eif4ebp1
Znrf1
Gapdh
Rbm34
Smad6
Akap1
Pigm
Nlrp1b
Zfp658
Ubac2
Nudt1
Dohh
Rnmt
Lims1
Prkab1
Tfb2m
Dido1
Cnst
Fyco1
Stk38
Yipf2
Timm29
Plekhb1
Irf9
Cenpa
Gm3435
Abhd8
Uck1
Thumpd3
H2-K1
Rbm39
Chordc1
Zc3h6
Dglucy
Ccl24
Usp36
Echs1
Tor1aip2
Tor1aip1
Vps18
Etfdh
Ccnl1
4930579G24Rik
Psma6
Rnasel
Frg1
Setd5
Zcchc7
Rpl38
Ube2f
Mtmr4
Myl6b
Akr1b7
Depp1
Hnrnph2
Gla
Znrd1as
Znrd1
Pafah2
Tecpr2
Cinp
Irak2
Mrpl39
Picalm
Amz2
Pdap1
Bud31
Lonp2
Taco1
Pold3
Ankrd24
Ncbp3
Atg16l1
Slc25a45
Galk2
Camk2d
BC004004
Ppp1r11
Gstm1
Acadl
Acaa2
Rwdd3
Adk
Ermard
Cops2
Furin
Spag9
Ogt
Atxn7l1
Cdc42ep4
Atp5g2
Azin1
Slmap
Lsm4
Fbxl3
Rpl3
Rusc2
Srsf7
Itpkb
Tsku
Dmpk
Zc3h10
Klhl24
Zfp623
H4c14
Arap1
Nr1h2
Parp2
Ippk
Hsd3b7
Fus
Pcbp2
Polr3e
Spg11
Tchp
Atrnl1
Sec24a
Vps13d
Phf5a
Aco2
Zpr1
Mcur1
Ddx41
Cln8
Colgalt1
Lzts2
Ints1
Trappc8
Baz1b
Ccm2
Man1b1
Tmem101
Rpl9
Lias
Arpin
Ankrd40
Arrdc2
C9orf72
Ptcd1
Ndufs7
Gm20346
Cpsf4
Sirt6
Mlycd
Dclre1b
Ap4b1
Prkrip1
Yars
S100pbp
Arf4
Esyt2
Dusp1
Ticam1
Sh3pxd2a
Sass6
Uroc1
Polr2j
Trp53rkb
Timm10
Gstm4
Vps29
Rad9b
Mrpl52
Tex14
Irf2
Kat7
Ltbr
Gm20594
Dus1l
Tinf2
Fam149b
Ecd
Ppp6c
Gadd45g
Hspa4
Tesk1
D230025D16Rik
Ndufb7
Fam168a
Zfp384
Rarg
Hp
Tmem229b
Acadsb
Arpc2
Neil1
Caap1
Ifit3b
Rer1
Morn1
Vps33b
Atat1
Flt3l
Mdc1
Zfp317
Ikzf5
Elp5
Ctdnep1
Rcan1
Leprotl1
4932438A13Rik
Nr0b2
Tor4a
Hhex
Tssc4
Gbp3
Tmem140
Sphk2
Ptcd2
Mrps27
Gins4
Eif5
Ppip5k2
Gin1
Unc119
Fubp3
Cxxc1
Lrrc8a
Zfpl1
Prmt5
Cdca5
Surf6
Akt2
Acsl1
Smg7
Slc35a4
Apbb3
Tmed2
Cnpy3
Cdkn2aipnl
Pdss1
Fam222a
Junb
Oxnad1
Dph3
Prkce
Creld2
Alg12
Csrp3
Eps15
Dennd6b
Lsg1
Etv5
Rnf185
Ndufv1
Ppp4r3b
Vmp1
Vnn3
Cfap20
Cish
Acy1
Slc25a51
Lair1
Chchd5
Mrpl11
Orc4
Mbd5
Tada1
Psmc6
Gosr1
Pgghg
Acbd5
Mideas
Abr
Dlc1
Rps27l
Sft2d1
Ifi204
Mttp
Skil
Bod1l
Ciao3
Naa60
Rpia
Mtf2
Ubald1
Lrrc61
Ldha
Rapgef6
G6pc
Akap7
Pnrc1
Ing1
Rab43
Ddx24
Atf6
Slc9a1
Dennd4b
Tie1
Hacl1
Btd
Plekhf2
Sbno2
Btg2
Snx14
Diaph1
Nup153
Cdk11b
Nvl
Wdr36
Rxrg
Setdb1
Oser1
Gid8
Amacr
Hnrnpf
Wdfy1
Homer3
Ankrd11
Srp19
Bms1
Tjp2
Zfand2b
Rpl21
D10Wsu102e
Gbp9
Uap1
Taf1c
Shld1
Abhd11
Apof
Rps12
Rrm1
Rab13
Nolc1
Tmem167b
Pnp
Gale
Steap3
Eef2
Tut1
Sult2a8
Rpl13a
Retsat
Elmod3
Pgm1
Cfh
H2ac18
Elmo2
Ergic2
Rmnd5a
Nop14
Grk4
Npas4
Ndrg2
Rasgrp2
Rint1
Cyrib
Wwox
Pik3ca
Eif4a1
Plin3
Txnl4b
Dhx38
Sec31a
Shoc2
Bbip1
Fkbp1a
Cox7a2
Srr
Cyp3a59
H2ac19
Itgb1
Prlr
C1rl
Trp53
Epn1
Dnajc14
Calu
Gpx1
Slc29a1
Btg1
C1qbp
Gtf2f1
Usp2
N4bp2
Cited2
Mdfic
Ttpa
Slc45a4
Dusp28
Phlpp1
Sqor