ChIP-Atlas: Target genes

Potential target genes for Rara

Query protein: Rara
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX208055 | ES cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Rara's Target genes

◢ Rara: Average

◢ SRX018669: ES cells

◢ SRX10562781: ES cells

◣ SRX208055: ES cells

◢ SRX208062: ES cells

◢ SRX520462: F9

◢ SRX520468: F9

◢ SRX520474: F9

◢ SRX520479: F9

◢ SRX3301664: Forelimb

◢ SRX3301665: Forelimb

◢ SRX4369776: Germline stem cells

◢ SRX4369779: Germline stem cells

◢ SRX4369782: Germline stem cells

◢ SRX4369785: Germline stem cells

◢ SRX337439: Liver

◢ SRX018670: mESC derived neural cells

◢ SRX118692: mESC derived neural cells

◢ SRX118693: mESC derived neural cells

◢ SRX675957: Th1 Cells

◢ Rara: STRING

H3c6
Eapp
H3c2
Tex14
H4c3
H3c11
H3c3
Sfi1
H3c7
H2bc9
H2bc4
H2ac6
H2bc12
H2ac12
Sspn
H3c13
H2bc18
H4c11
H3c4
Gm3448
Gm3417
9030025P20Rik
H3c10
Srsf7
H2ac4
H2bc6
H2ac10
Tcte3
Gm3435
H2bc1
H2ac1
Mpp7
H4c1
H3c1
H3c8
Gtf2a1
H4c12
H3f3b
H2bc13
H2ac13
Polr2a
H4f16
Ermard
H2bc22
H2ac22
H4bc24
H2bc23
H2ac24
H2ac23
H4c9
H4c4
H2bc15
H2ac15
H2bc11
H2ac11
H3c15
H3c14
H2bc7
H2ac7
H2bc14
H2ax
Mphosph9
2810006K23Rik
H4c2
H4c18
Rps20
Atp1b2
H4c8
Insig1
H4c17
H4c6
H2bc3
H1f2
Gtf2b
H2bc21
H2ac21
H2ac20
Ubb
Jund
Csrnp2
Cdkn1a
Errfi1
H2bc8
H2ac8
Zbtb37
H1f4
Fam53c
Tsc22d1
Pcna
Arid5a
H1f3
Rcl1
Poldip3
Aplp2
Wiz
Prdx1
Ing1
Calr
Rps12
Taf4
Gadd45a
Hnrnpab
Pnp
Btg2
Spg11
Rpl3
Fyco1
Rps3
Skp1
Hexim1
Tmem87b
Nufip2
Sgf29
H2ac19
H2ac18
Sde2
Slbp
Hectd4
Uchl1
Fus
Ppp1r10
Mrps18b
Rnf19b
Arl15
Fut8
Actb
Arl6ip1
Btg1
Klf5
Txnip
Napepld
Hspa5
Nabp1
Dhx8
Utp14b
Acsl3
Sub1
Rps27rt
Rab13
Smc3
Jpt1
Zfp119a
Rft1
Mbtps1
Rdm1
Calm2
H4c14
Mat2a
Haus1
Atp5a1
Rack1
Dnajb9
2410002F23Rik
Taf13
Smarca5
Mcl1
Srsf3
Dynlt1b
Mylip
Arrdc2
Sf3b1
Eif4a1
Raver1
Cited2
Itpr1
Ccnt1
Slc9a1
Eif4g2
Dgat1
Kmt5b
Tmem209
Ssmem1
Nubp1
Snrpa
BC024978
Gfpt2
Ccdc12
Eloc
Snx11
Tjp2
Hnrnpa2b1
Cbx3
Mre11a
Ankrd49
Hsp90aa1
Ppp1r2
Taf1d
4931406C07Rik
Rpl13
Sap18b
Sap18
Ddx5
Cep95
Mrps35
Phf10
Tubb4b
Gls
Ints6
Ptpa
Crat
Aqr
Dusp1
Rps6
Znfx1
H2az1
Rpl17
Rplp0
Ccnq
Mtf2
Tmpo
Prpf3
Ccdc86
Fgf4
Mak16
Rps5
Taf4b
Rps28
Ndufa7
Rbm25
Cep43
Ippk
Calm1
Wsb1
Snrpb
Poli
Tob1
Sertad1
Zfp959
Rita1
Ddx54
Rps23
Serbp1
Ctsl
Ddb1
Rsrp1
Mknk2
Thoc1
AW209491
Hspa1l
Hspa1a
B4galt3
Pdss1
Hnrnph1
Rpl9
Lias
Rpl12
Lrsam1
Gm46430
Ubc
Uspl1
Ints14
Rps9
Slirp
Nrp
Alkbh1
Ddx11
Ankrd11
Caprin2
Ddx23
Ccnyl1
Gpx4
Srsf6
Timm44
Zfp119b
Hmgb2
Top2a
Rps2
Degs1
Sugp1
Mau2
Smndc1
Pole4
Gtf2f1
Tnrc6c
Vps52
Rps18
Srsf2
Mfsd11
Glul
Slc2a1
Upf3a
Otub1
Sgpl1
Depdc7
Srsf1
Sphk2
Rpl18
Drg1
Apc
Sin3b
Hells
Ccdc110
Dars
Ttc17
Zzz3
Slc38a2
Styxl1
Mdh2
Arc
Pcnp
Dck
Cenpt
Mrpl39
AU041133
Nop14
Grk4
Efcab14
Gk5
Fos
H2aw
Rplp2
Cabyr
Fam43a
Kpna2
Mrpl30
Mitd1
Ergic2
Gtpbp10
Paxip1
Dynll1
Smg5
Sf3b3
Cog4
Arhgap19
Ermp1
Hif1an
Gpx1
Mterf1b
Ywhaq
Zfp207
Tubgcp5
Ftl1
Rpsa
Tfrc
Impdh2
Serinc3
Ier5l
AW549877
Map3k7
Taf12
Rrp15
Mterf1a
Rpl8
Zc3h13
Ss18
Pitrm1
Snx5
Mgme1
Gm3752
Klf6
Amd2
Amd1
Matr3
Rpl37a
Resf1
Erdr1
Dhx9
Dmxl1
Marchf3
Lsm14a
Ppp1r8
Ociad1
Qrich1
Atf7ip2
Rbm39
Mrpl45
Eef1e1
Zfp982
Rpl23
Tmem270
Parpbp
Nup37
Aaas
Rbmxl2
Ier5
Pdhx
Apip
Rpl7a
Med22
Gbe1
Gm3739
Eif3a
Trip4
Kctd20
Rps24
Npm1
Rpl15
Nkiras1
Slc3a2
Surf4
Stkld1
Pfdn2
Nit1
Zfp981
Hnrnpf
Tm2d1
Dppa5a
Rcn2
Nop58
Rpl10a
Mrpl35
Srsf5
Slc25a30
Pik3r3
Hspa4
Hjurp
A730008H23Rik
Map1lc3b
Rbm4b
Tcf15
Commd1
Setd5
Dbr1
Dtd2
Chchd2
Rsrc2
Kntc1
Mphosph10
Mcee
Selenok
5730455P16Rik
Slc5a6
Atraid
BC005537
Cdkn2aip
Med21
Orc5
Lipo2
Gtf2a2
Ctdp1
Eif1
Clk1
Puf60
Cisd2
Frg1
Nsrp1
Mob1b
Ddx20
Rplp1
Seh1l
Mrps28
Topbp1
Ahctf1
Rnps1
Anln
9530077C05Rik
Rnf4
Zfp978
Sgk1
Trp53inp1
Mad2l1bp
Usp53
Gemin6
Mad2l1
Nat10
Kctd5
Msh6
P4hb
Urgcp
Bclaf1
Enc1
2310039H08Rik
Eif4b
Pigt
Dpy19l4
Tmem175
Gak
Wipf2
Ppil4
Rpl21
Selenof
Hs2st1
Pnn
Rbm8a
Nutf2
Grcc10
Hmga1b
Hmga1
Ssbp1
Psme4
Tcea1
Mrpl15
Mrpl12
Mrpl21
Ighmbp2
Gapdh
Zswim3
Acot8
Map2k2
Tdp2
Acot13
Garem1
Mtif2
Kit
Morc3
Tbrg1
Snip1
Dnali1
Gcsh
Crebzf
Sesn2
Mapk1
Gm2237
Nipa2
Zbtb11
Birc6
Prorsd1
Zdhhc3
Exosc7
Rdh14
Tra2b
Csde1
Sephs2
Add3
Rps27l
Nprl3
Thnsl1
Enkur
Otud6b
Slc25a3
Ncoa4
Atf6
Wnk1
Bbs10
Cep295
Smad4
Atp1a1
Vcl
Mettl25
Ccdc59
Psmb2
Rps10
Trmt2a
Ranbp1
Dnajb4
Fth1
Nasp
Fubp1
Yeats4
Vcpkmt
Ppp2r2a
Chd9
Cd81
Gclc
Rps7
Yes1
Hspa8
Smurf2
Cdh1
Rpl19
Rpl7l1
Rpl31
Smtn
Pabpc1
Ptp4a1
Rps13
Rab21
Eef1akmt4-ece2
Eef1akmt4
Alg3
Msra
Atg101
Tmem191c
Peli1
Trpm3
Epc1
Scfd1
Tmem129
Tacc3
Dhx30
Kif20a
Brd8
Zfp11
Nfe2l2
Ubr3
Hpf1
Ddit4
Cirbp
Tmem183a
Mob1a
Dus4l
Cog5
Tigar
Dhps
Cdc37l1
Rpl32
Snapc5
Cpsf1
Ube2s
Rpl35a
Iqcg
Nob1
Mrpl28
Hspa1b
Usp42
Fam204a
Abraxas1
Zfp433
Gm32687
Aars2
Wdr43
Inpp5k
Depdc1a
Canx
Hibadh
Phykpl
Zcchc17
Snrnp40
Eef1akmt2
Cpm
Pbrm1
Mfsd14a
Gm3005
Gtf3c2
Usp16
Zfp786
Ptpn2
Bzw2
Ankmy2
Rpl37
Ppp2r1b
Mtg1
Gorasp2
Utp3
Id1
Rpl27a
Atp9b
Tubgcp6
Mtfr2
Zfp980
Pradc1
Cct7
Sppl2a
Yif1b
Nup54
Ndufc1
Psmd7
Pou2f2
Tubb2b
Ier2
Clcn4
Arrdc3
Rnf169
Selenos
Rpl26
Sik2
Ddx52
Zfp944
Zfp758
Ccnf
Tmx3
Med15
Exo5
Tsnaxip1
Ranbp10
Psma2
Mrpl32
Hspa9
Saysd1
Tuba1a
Selenoh
Luc7l
Slc25a4
Nudt1
C330018D20Rik
Coq3
Grasp
Nol10
Gtf3c3
Lmln
Chuk
Cbx8
Btaf1
Rpl28
Atxn7l2
Alad
Rad51ap2
Rab8a
Eef2
Slc5a3
Mrps6
Sfpq
Cdc5l
Tmem179b
Atg16l1
Tango6
Rrm1
Nup85
Cox7c
Rbm12
Cpne1
Mecr
Polg2
Stmn1
Rpl13a
Chrac1
Sptbn1
Pih1d1
Aldh16a1
Rcc1
Rab7
Rc3h2
Hilpda
Slc30a6
Morc2a
Ube3a
Mybbp1a
2410141K09Rik
Wdr77
Atp5pb
Chchd1
Ints8
Spg7
Pafah1b1
Micos10
Ipo7
Fancc
Scnn1g
Kcnk5
Rnf149
Chmp2a
Cacybp
Topors
Smim27
Cks2
Cul1
H1f1
Bzw1
Anapc1
Rpn1
Zscan25
Srfbp1
Vps51
Sgo1
Zfp850
Nrd1
Top1
Ndufb8
Mtch2
Tbx3
Adss
Tatdn3
Nsl1
Kifc5b
Tmem97
Zfp868
Amdhd2
Fra10ac1
Dcp1a
Tpst1
Cox5a
Haus4
Ap4e1
Trap1
C87436
Ndufs2
Ddx39a
Prpf19
Polr2d
Tra2a
Ptpru
Malsu1
Cog6
Pdia3
Catsper2
Odc1
Vamp1
Rpl6
Commd2
Gtf2h3
Eif2b1
Cct4
Lin7c
Dnajc24
Nqo1
Cox16
Trmt5
Slc38a6
Taf3
Bex4
Hnrnpc
Uqcrq
Washc4
Ncapg2
Stat1
Ube2n
Trim52
Timm22
Cth
Eif5
Trmo
Rad23a
Cfl1
Asxl2
Cdc42se2
Rpl23a
Tmem80
Deaf1
Dnaja2
Dhx15
Prpf4
Cdc26
Abhd17a
Gspt2
Mff
Azin2
Akap8l
Zfp213
Slc25a5
Adprhl2
Akirin1
Stag1
Rab30
Smc5
1600014C10Rik
Ndufb1
Cpsf2
Atp7b
Alg11
Gmfb
Cers5
Rnf32
Pum1
Zfp597
Raf1
Rab33b
Taok1
Chmp5
Bag1
Tatdn1
Ndufb9
Rfc4
Eci1
Cox20
Phactr4
Ogfod1
Nudt21
Zfp219
Tagap1
Etfrf1
Casc1
G3bp1
Bcl2l1
Clk4
BC049762
Rrn3
Wdr74
Atf1
Rpain
Rsl1d1
Ints4
Abhd10
Tnrc6a
Mnd1
Psph
Cct6a
Xpo4
Mettl4
Pdlim7
Anapc10
Abce1
Zc3h18
Rala
Lamtor4
Phrf1
Ifrd1
Paip2
Rps19
Creb1
Ephb3
2510002D24Rik
Leng8
Tbrg4
Cep63
Anapc13
Lars2
Snrnp48
Msantd2
Pet117
Kat14
Tob2
Ksr1
Rsbn1l
Slc35e2
Marcksl1
Gadd45g
Ndufa2
Ik
Sp1
Nfat5
Tubd1
Rps6kb1
Serf2
Sfxn2
Arl3
Nras
Smim10l1
Sucla2
Hint3
Ndufa9
Atad1
Phf20l1
Zfp7
Rbm12b1
Dynlt1f
Dynlt1c
Wdr27
1600012H06Rik
Naa20
Akr1b3
Sqstm1
Higd1a
Ubn2
Inafm2
Kifc1
Suz12
Tmsb10
Acly
Gadd45b
Kat7
Psme3
Smc6
Gen1
Zcchc10
Tet2
Ranbp6
Cnpy2
Asb7
Akap11
Arl4d
Dnaja1
Slc20a1
Srp54c
Srp54b
Asph
Gsto1
H1f5
Xpo1
Tex19.1
Wdr61
1110004F10Rik
Uchl5
Ro60
Tmem14a
Vegfa
Slc25a39
Baiap2
Lrrc8a
Eif2b5
Anapc15
Sh3bp4
Zfp512
Taf8
Cdc73
Herc2
Naca
Hacd2
Tasor
Kdsr
Med4
B230219D22Rik
Prrc2a
Med17
Vapa
Lcmt2
Adal
Rab5a
Timmdc1
Rbx1
Cstf3
Sdha
Ccdc127
Ppp1r3c
Glce
Edrf1
Cnbp
Wdr45b
Vamp4
1810009A15Rik
Nsun4
Rnpc3
Arfgap1
Gtf3c5
Supt16
Stk31
Tbc1d31
Rpp25
Frmd6
Fbrsl1
Pms1
Ormdl1
Gpr19
Ubxn1
Ssb
Gm3500
Dennd6a
Palb2
Dctn5
Rpl41
Tgoln2