ChIP-Atlas: Target genes

Potential target genes for Rara

Query protein: Rara
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX520479 | F9
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Rara's Target genes

◢ Rara: Average

◢ SRX018669: ES cells

◢ SRX10562781: ES cells

◢ SRX208055: ES cells

◢ SRX208062: ES cells

◢ SRX520462: F9

◢ SRX520468: F9

◢ SRX520474: F9

◣ SRX520479: F9

◢ SRX3301664: Forelimb

◢ SRX3301665: Forelimb

◢ SRX4369776: Germline stem cells

◢ SRX4369779: Germline stem cells

◢ SRX4369782: Germline stem cells

◢ SRX4369785: Germline stem cells

◢ SRX337439: Liver

◢ SRX018670: mESC derived neural cells

◢ SRX118692: mESC derived neural cells

◢ SRX118693: mESC derived neural cells

◢ SRX675957: Th1 Cells

◢ Rara: STRING

Trim29
Adam5
Ilf2
Dcpp1
H4c8
Trib3
Tas2r134
Sumf1
Gtf2a1l
Eif2s3y
Slc38a5
Fxyd1
Ly6l
Mill1
Lilr4b
Stk3
Rps29
Mettl14
Slc44a3
Cxcl5
Gria3
Alox12b
Cnga1
Kcnn2
Selenbp1
Fanci
Il1b
Gm51598
Pak3
Etv3l
Depdc1a
Katna1
Gpr141
Gcm2
AU018091
Vmn1r205
Proca1
Gas1
Cbx4
Scgb2b1
Shox2
Musk
Alx4
Snorc
Ltbp1
Tgtp1
Ifna6
Olfr222
Pcx
Defb8
Ostn
Zic4
Pabpc5
Scgb2b2
Dclk3
Cyp2f2
Avpr1a
Ikzf4
Fam71f1
Nkx2-5
Cmas
Mboat1
Zp1
Dytn
Foxp2
En2
Iigp1
Cyren
Inmt
Asb2
Cyp2d9
Cxxc4
Coro6
Cdh26
Scgb2b3
Trarg1
Olfm5
Brk1
Wipf2
Rffl
Retnla
Lmo3
Gnb5
Trim34a
Rbks
Babam2
Slc2a9
Stbd1
Ppp6r3
Cyp3a16
Papln
Vgll4
Fuca2
Pomgnt2
Strip1
Lrrtm4
Zcchc9
Dcpp3
Akap17b
Pate4
Dysf
Cped1
Frmd4b
Cdx1
Agbl5
Igfbp2
Rpl37rt
Oxgr1
Mrgpra2a
0610010F05Rik
Prss51
Fuom
Rarb
Shank1
Fabp6
Erdr1
Zswim8
Slx4ip
Klri1
Cngb3
Olfr1200
Abcc3
Olfr971
Xlr4a
Ms4a4d
Crebzf
Hs1bp3
Gfpt2
Mlxipl
Trhr2
Zfp846
Zfp710
Ubc
Stau2
Gpm6a
Gm3173
Oxnad1
Dph3
Gnl2
Pros1
Emp2
Scn8a
Olfr813
Ankrd66
Lamp5
Ucn3
H2-Eb2
Rab27b
Slamf7
Runx1t1
Lsm6
Cd163l1
Kdm5a
Chic1
Echdc2
Chpf2
Prss47
Knl1
H2-M5
Tdpoz3
Slitrk3
Fbxo31
Adgra2
Oasl1
Plekhb1
Irak3
Herc6
Rftn2
Nt5c1b
Nxf2
Epha5
Smarca1
Dsg4
Casp14
Spink13
Pcdh7
Uck1
Arhgef19
Tnfsf10
Sacm1l
Rxfp1
Porcn
Gdpd2
Hivep3
Cfl2
Tpcn2
Tmem164
Nrarp
Ildr1
Arf4
Gnai2
Tmem248
Syngap1
Tm7sf3
Ciao2b
Olfr125
Ndp
Ces2a
Ces1f
Usp17lb
Meikin
Xlr4c
Pou3f2
Neurod4
Lrrn3
Il22ra2
Eif4e1b
Abcb7
Ptpmt1
Gm45337
Mknk1
Ccdc141
Dhx32
Fam3c
Gpr132
Grm4
Spp1
Ube2dnl2
Slc6a16
Pnp
Paip1
Mynn
Exosc2
Ttk
Nudt16
Ctnna3
Mdk
Tc2n
Prickle2
Serpinb12
Pcdhb9
Olfr1286
Ceacam11
Itih1
Fabp9
Cntnap5b
Vat1l
Olfr1208
Itgal
Fgf6
Cplx2
Fubp3
Ndufs8
Snupn
Ogfod2
Cox7a1
H2-Q8
H2-Q6
Zic1
Nek2
Olfr915
Ppdpf
Guf1
Atp5e
Cldn34c4
Acp6
Cox17
C130073F10Rik
Ttpal
Dpp9
Ubap1
Dusp9
Rarg
Rbpj
Pxn
Atxn2
Mpc1
Krtap6-1
Ak5
Cdyl
1700021F07Rik
Vash2
Pdzrn3
Mef2c
Lypd6
Krtap6-3
Guca1a
Cst11
Cabp2
Actrt1
Scaper
Epgn
Hoxd3
Pyroxd1
Olfr859
Abcc2
Alox5ap
4931429L15Rik
Bhmg1
Rapsn
Hoxa5
Zdhhc18
Otud5
Sema3g
Dennd6a
Frmd4a
Card6
Fam32a
4931406B18Rik
Slc43a1
Phf5a
Aco2
Il33
4930503B20Rik
B3gat1
Gpm6b
Slc6a14
Nfam1
Celf2
Arpp21
Enpp4
Dedd
Spata33
Chmp1a
Hagh
Fahd1
Pex2
Zfp438
Rasl10b
Sdha
Ccdc127
Dgat2
Sbno1
H2-Q9
H2-Q7
Taf6l
Pus7l
Irak4
Mrpl37
Cyb5rl
Cdk15
Cxcr3
Tfap2c
H2-Bl
Alkbh7
St3gal3
Zfp385a
Stard6
4930503L19Rik
Tex30
Agxt2
Cd22
Olfr658
Homer3
Arl6ip4
Rhox11
Tomm5
Rnase4
Ang
H2-K1
Rpl30
Cfap20dc
Rab8a
Mpv17l2
Plxdc2
Gabbr1
Gtpbp4
Dusp5
Agtpbp1
Tfrc
Tcp11
Mllt6
Dag1
Atg10
Pcmtd1
Paqr5
Dlg3
Fam50b
Slco1a5
Mecom
Dbx1
Mymx
H2-Q2
Muc1
Rara
Tspan9
Cox5b
Exd2
Yars
S100pbp
Pdcl3
Zfp930
Tpcn1
Iqcd
Rhobtb1
Lipe
Cacnb3
Eapp
Asmt
Tex14
H4c3
Mtf2
Mkrn1
Sspn
Slc15a1
Tmem191c
H3c6
H3f3b
Rdm1
Srsf7
Polr2a
H3c7
H2bc9
H4c4
H3c11
H4c18
H3c15
H3c14
Hspa5
H4c11
Ing1
H3c2
H4f16
H4c9
H3c3
H2ac19
H2ac18
Gm20594
H3c13
H2bc18
H2bc21
H2ac21
H2ac20
H2bc4
H2ac6
H2ax
Ifitm7
Bmerb1
Icam1
H4c12
Hnrnpab
Bmt2
H2bc12
H2ac12
H1f2
H1f4
Fam53c
Arrdc2
Gm3448
Gm3417
Jund
Nabp1
Rsrp1
H3c10
Btg2
Mphosph9
2810006K23Rik
H4c17
Ubb
Hspa8
Taf4
H4c1
Calr
Tcte3
Gm3435
Zbtb37
Atp2a2
Tob1
Arid5a
Taf13
Smarca5
9030025P20Rik
Gtf2a1
Ints6
H3c4
Mylpf
Hrob
Poldip3
H4c2
Sfi1
Hexim1
Rpl3
Letmd1
Slc9a1
Calm2
Sde2
Nufip2
Junb
Fus
Utp14b
Acsl3
Mpp7
Sgk1
Mbd3
Dppa2
Hsp90aa1
H3c1
Srsf5
Insig1
Sntb2
Csrnp2
Phc1
Haus1
Atp5a1
Ppp1r10
Mrps18b
Dnajb9
Pbld2
H2bc22
H2ac22
Klf6
H2bc6
Arl15
Ddit4
Calm1
H4c14
Rbm14
Gm21992
Gtf2b
Gpx1
Cltc
Sub1
Ctsl
Ier2
Znfx1
Ankrd28
Raf1
Atp1a1
Ndufs7
Ndufa6
Gpcpd1
Aplp2
Gadd45a
H2ac4
Cited2
Actb
Jpt1
Eif4g2
Rnf19b
Tsc22d1
Rnaset2b
BC005537
Clu
Mat2a
Lman1
Tubb4b
Kmt5b
Ermard
Prdx1
H2bc11
H2ac11
Errfi1
Rnaset2a
Srsf2
Mfsd11
Sf3b1
Cog6
Eif4a1
Ghdc
H1f3
Smc3
Mknk2
Mib2
H3c8
Pcna
P4ha1
Mcl1
Arl4d
Wsb1
Hsp90ab1
Srsf3
Dhx8
Zfp36l1
Btg1
Wsb2
Amd2
Amd1
Hnrnpa2b1
Cbx3
Gtf2f1
H2bc13
H2ac13
Amacr
Arl6ip1
Trp53inp1
H2bc1
H2ac1
Slc38a2
Ftl1
Vegfa
Ifrd1
Sephs2
Kctd5
H2ac10
H2bc8
H2ac8
Ier5
H2bc7
H2ac7
Clcn4
Spg11
Tuba4a
Dmxl1
H4bc24
H2bc23
H2ac24
H2ac23
Marchf3
Ddx5
Cep95
Slbp
Rita1
Gtf3c6
Dok4
Prdm14
Styxl1
Mdh2
Luzp1
Hjurp
A730008H23Rik
Zfand5
Cpt1a
Uspl1
Tnrc6c
Sqstm1
Rhob
Pabpc1
Ppp1r3c
Dusp1
Fos
Skp1
U2surp
Acly
Tob2
Klf7
Rcbtb1
Msh6
Vcl
Rnd3
Peli1
Slc25a39
H4c6
Cep43
Slc25a3
Dhcr24
Rps12
Gapdh
Fmc1
Ep400
Msmo1
Fyco1
Dnaja1
Prmt8
Pigt
Eef1a1
Hnrnph1
H2bc15
H2ac15
Mafb
Abr
Ccnyl1
Slc9a3r1
Maml1
Rps3
Epha2
Glul
Wdr77
Atp5pb
Rps20
P4hb
Jun
Trmt2a
Ranbp1
Mrpl39
Plk2
Clic4
Ncl
Pdia3
Mbtps1
Catsper2
Snrpe
Mterf1b
Herc2
Dhx9
Gtf2a2
Denr
Traf7
Snx18
Sap18b
Sap18
Cebpa
H2bc14
Ctnnb1
Ppp1r2
Mterf1a
Sirt3
Psmd13
Cirbp
Uqcrc1
Sirt1
Ttc41
Tra2b
Hsp90b1
Grcc10
Impdh2
Trpm3
Ipmk
Mad2l1bp
Idi1
Cpsf1
Itpr1
Fasn
Fam25c
Chd9
Tcta
Rhoa
Ankrd11
Hhex
Frmd6
Tti2
Mertk
Odc1
Exd1
Chp1
Vamp1
Ppp1r15a
Plekha4
Smg5
Eif4e
Usp37
Cnot9
Urgcp
Tsc22d2
Slc25a51
Ndel1
Slc25a30
Sesn2
Erf
Chchd1
Hmga1b
Hmga1
Napepld
Susd6
Map1lc3b
Gls
H2bc3
Klf10
Rps6
Paxip1
Creld1
Por
Txnip
Pdhx
Apip
Fdx1
Klhl21
Dnajb1
Mrpl1
Acer2
Caap1
Ncoa3
Iqgap3
Gpx4
Dnajb4
Chchd2
Nfkbia
Mrps28
Hspa1l
Hspa1a
Mylip
Rsrc2
Kntc1
Cdkn2aip
Rnf103
Med23
Kdm4c
Socs3
Dgat1
Ccdc110
Acy3
Arhgap19
Man1a
Knop1
Iqck
Fth1
Chordc1
Atp1b2
Wdr82
Sertad2
Rnf125
Tagap1
Serinc3
Rps2
Cd81
Rusc2
Rpl7a
Med22
Txn1
Rpl23
Zfp119b
Slc31a1
Fkbp15
Srp19
Nudt4
Slc35d1
Eif3a
D230025D16Rik
Taf1d
4931406C07Rik
Whamm
Acp5
Rpl13
Slx1b
Amdhd2
Ern1
Adpgk
Unk
Taco1
Zswim3
Acot8
Actn4
Irs2
Hspa1b
Rcl1
Gadd45g
Degs1
Rplp0
Cebpd
Sertad1
Smyd4
Rpa1
Lrrc28
Mapkapk2
Mapk14
Ddx3x
Rps24
Nrd1
Gclc
Rps27rt
Rab13
Atp5g3
Ncoa4
Glce
Cpm
H3f3a
Ccnt1
Sgf29
Mak16
Sbno2
Ppia
Nfe2l2
Eef2
Rpl9
Lias
Pcif1
Cyb5r4
Ulk2
Pdk1
Rps9
Rbbp6
Ints14
Baiap2
Wbp4
Shld2
Glud1
Elf1
Rbm39
Zfp119a
Vmn2r4
Tnnt1
Actg1
Nr6a1
Ptp4a1
Arrdc3
Nsrp1
Map2k4
Scnn1g
Zfp770
Dip2b
Cryzl2
Pik3r3
Mrpl44
Mapk1
Pigl
Ncor1
Ankrd39
Klf2
Rcn2
Npm1
Hmox2
Gadd45b
Palb2
Ndufaf3
Dctn5
Tuba1c
Rbm4b
Zfp959
Midn
Plec
Slc5a3
Mrps6
Commd1
Adk
Abcb8
Polr3e
Vps52
Rps18
Tmem39a
Naca
Bbs2
Trappc3
Sod1
Rpl17
Ost4
Map2k2
Irf5
Ddx24
Ccar1
Zfp963
Slc16a10
Rtn3
Rab33b
Csrnp1
Nfe2l1
Slc20a1
Rpl8
Etfrf1
Casc1
Plk3
Mtg1
Jak1
Nfkbiz
Ddost
Ctdp1
Unc5b
Ggcx
Epc1
Eif1
Slc2a1
Nme1
Tango2
Ksr1
Gm3667
Ttc7
Rnf38
Smurf2
Psmd3
Ppib
Med21
Taf4b
Preb
Snx29
Rnd1
Mob1b
Dnajc1
B2m
Paip2
Ssbp1
Id3
Hint1
Bsg
Gpat4
Pfn1
Gipc2
Rps3a1
Setd5
Rhou
Spry4
Edrf1
Cat
B4galt3
2410002F23Rik
Lgr4
Irf8
Pcf11
Atp5j
Kcnk5
Sgpl1
Tiparp
Pgrmc1
Net1
Fxr2
Herpud1
Top1
Cdk12
Bclaf1
Acer3
Lsm14a
Ubr3
Rpl15
Nkiras1
Usp53
Rapgef6
Psme4
Phf11d
Ctbs
Stra8
Snrpg
Sugt1
Ptma
Fbxo8
Cep44
Atp5b
Ywhag
Fam43a
Acad12
Trip4
Hs3st3b1
Mtr
Kbtbd7