ChIP-Atlas: Target genes

Potential target genes for CTCF

Query protein: CTCF
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX085406 | Kc167
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CTCF's Target genes

◢ CTCF: Average

◢ SRX11499361: 0-14h embryos

◢ SRX11499362: 0-14h embryos

◢ SRX11499363: 0-14h embryos

◢ SRX11499364: 0-14h embryos

◢ SRX11499365: 0-14h embryos

◢ SRX11499366: 0-14h embryos

◢ SRX11499367: 0-14h embryos

◢ SRX11499368: 0-14h embryos

◢ SRX287743: 14-16h embryos

◢ SRX287744: 14-16h embryos

◢ SRX474576: 5-13h embryos

◢ SRX474577: 5-13h embryos

◢ SRX474578: 5-13h embryos

◢ SRX671941: 5-13h embryos

◢ SRX7889132: Central Nervous System

◢ SRX7889133: Central Nervous System

◢ SRX7889134: Central Nervous System

◢ SRX7889135: Central Nervous System

◢ SRX7889142: Central Nervous System

◢ SRX9660889: Central Nervous System

◢ SRX9660890: Central Nervous System

◢ SRX14474253: Cultured cell lines

◢ SRX14474261: Cultured cell lines

◢ SRX14474277: Cultured cell lines

◢ SRX14474281: Cultured cell lines

◢ SRX2010897: Embryos

◢ SRX6780074: Embryos

◢ SRX645427: Eye-antennal disc

◢ SRX085404: Kc167

◢ SRX085405: Kc167

◣ SRX085406: Kc167

◢ SRX100250: Kc167

◢ SRX100251: Kc167

◢ SRX1021223: Kc167

◢ SRX252226: Kc167

◢ SRX749039: Kc167

◢ SRX749040: Kc167

◢ SRX749041: Kc167

◢ SRX016158: S2

◢ SRX016160: S2

◢ SRX191913: S2

◢ SRX191914: S2

◢ SRX2638363: S2

◢ SRX2638364: S2

◢ SRX027388: White prepupae

◢ CTCF: STRING

nAChRalpha6
Fkbp59
CG4537
CG34183
CG9171
CG3546
CG3527
CG11444
CG11436
NLaz
CG31659
Cpr30B
CG17855
CG13113
GlyP
CG4259
pan
Cyp318a1
Cyp311a1
Unc-115a
Unc-115b
Edg84A
Ccp84Ag
p24-2
CG32939
CG18542
galla-2
OXA1L
CG6409
Cpr67Fa1
Pcf11
Cyp6a23
Cyp6a22
Cyp6a17
gcm
Mtpalpha
CG31709
l(1)sc
Or67c
can
Or67d
CG14459
Ca-beta
Vm32E
eya
Wdr62
CG31663
CG15358
capu
CG14423
CG3603
CG17959
lectin-46Cb
CG1648
CG1688
Sprn
CG5906
CCDC151
beat-IIIc
nrv3
jp
brwl
CG46468
Moca-cyp
l(2)34Fd
l(2)34Fc
Rab14
Pgant35A
CG43052
Vsx2
bbg
Mpcp2
CG43246
CG42814
CG42813
CG31068
Spn28Da
CG7102
Spn28Db
CG14270
CG10804
CG10803
CG10802
Lmpt
cindr
His2B:CG33908
His2B:CG33906
His2B:CG33900
His2B:CG33888
His2B:CG33886
His2B:CG33884
His2B:CG33880
His2B:CG33878
His2B:CG33876
His2B:CG33874
His2B:CG33872
His2B:CG33870
His2B:CG33910
His2B:CG33904
His2B:CG33902
His2B:CG33898
His2B:CG33896
His2B:CG33894
His2B:CG33892
His2B:CG33890
His2B:CG33882
Rlip
CG5697
CG32461
Calx
CG43446
Hk
CG13465
BobA
CG7924
CG34244
CG7906
CG32117
CG12520
CG34260
east
PIG-K
CG8519
pHCl-1
CG10041
CG10038
siz
eater
CG17189
CG14259
chn
mtgo
CG5897
CG32816
CG3777
Abd-B
pyd
osk
Svil
CG13962
SIFaR
Eh
TfAP-2
CheA56a
CG30122
CG31275
Mp
Wnt4
lace
vir-1
CG6405
CG6388
CG5446
Spn75F
lectin-28C
CG14535
TwdlE
unc-5
prage
Adar
CG14416
rdgC
Dlg5
CG4970
CG14930
CG14929
CG4020
CG12236
abd-A
CG43880
tna
LManII
LManI
CG43271
Sfp36F
CG5790
CG43362
CG14762
DCX-EMAP
mRpS33
CG31279
CG17565
CG14881
Syn2
CG1077
Osi1
sr
2mit
ind
CG43680
CG43679
CG43678
CG18581
CG13461
CG12310
Cpr100A
CG15545
Cyp12e1
CG16721
Usp30
CG12863
scyl
tzn
Spc105R
CG3698
CHES-1-like
CG15478
CG15556
Gycbeta100B
CG5062
CG31008
CG31007
SteXh:CG42398
CG31823
CG31821
CSN3
CG13255
CG11456
CG1354
CARPB
Snp
CG13501
CG13500
CG3638
CG11403
tow
CG32107
CG10943
CG43980
CG32445
CG32444
Atox1
CG9344
CG9313
CG34115
CG15650
CG15649
CG9263
CG16853
CG16852
CG15638
Alp13
Bub1
Bsg25D
Galphao
CG12895
CG10481
CG6118
Act88F
alpha-Man-IIb
CG9593
mthl8
CG12617
elgi
Pka-C3
GXIVsPLA2
CG17032
N
Cpr76Bc
Cpr76Bb
Cpr76Ba
CG42495
Cyp6a18
CG32295
Spn
SNF4Agamma
cm
CG4593
CG42308
CG32736
CG3032
RpS7
CecB
CecA2
CecA1
Anp
CG12061
Nc73EF
Cpr73D
inv
CG34458
CG34457
prd
ovo
Dys
RpS21
CG3104
CG2991
CG15025
CG10365
nau
CG10232
TotX
RhoGAP100F
Rift
FeCH
CG44437
Nrt
cib
brn
Xpac
CG6379
CG15375
CG34289
CG13481
Ama
bcd
LanB2
mthl14
E(bx)
CG44837
Sfp84E
Os-C
CD98hc
mIF2
Ppn
CG31036
CG15517
CG15515
scrib
Myd88
Pop2
Grip163
CG6928
rswl
Prp19
CG5189
CG30120
Hers
Nepl16
CG34027
CG33285
Ent2
CG9596
IFT52
COX5BL
COX5B
phyl
Oaz
CG34313
CG32832
CG31743
CG17746
CG12078
mRpS18C
CG2218
CG15536
CG15535
CG15533
CG42740
CG2217
CG12991
CG12992
sm
mdlc
CG4390
CG17193
CG42753
CG43277
CG18367
Spx
Rbcn-3A
Nepl18
Nepl17
Mnt
Parg
Tlk
Rala
Indy
CG13872
stc
CG15269
stl
CycB
AdamTS-A
CG7328
dpr4
Rubicon
CAH3
Ptp61F
312
Gr89a
Decay
Cad89D
CG6142
SmydA-4
Drp1
CG15615
CG9005
ftz-f1
CG5213
CG17450
GCS2alpha
Dsk
RpS26
CG34112
CG9855
CG9853
CG14647
eIF3d1
GILT3
GILT2
CG18754
CG16710
PK1-R
CG9920
CCHa1
nrv2
CG43610
CG17376
CG17377
CG34274
CG4597
PhKgamma
ome
CG43121
PGRP-LA
PGRP-LC
Galphai
CG43439
CG32388
CG32795
w
aft
fab1
CG33981
CG12007
Fancm
CG2493
Tsp
Nhe3
CG11327
dnt
CG13086
CG42784
Gpdh1
CG9044
CG13280
mdy
Gug
CG6983
CG7329
Crys
Or33c
Or33b
dco
Sox100B
CG13293
CG14082
Ntmt
CG46338
CG30010
Lime
CG13907
Usp10
mRpL13
CG10602
scpr-B
scpr-A
CG5214
CG17734
CG43332
ver
nst
eIF2beta
Gcn5
CG34417
Got1
Ccp84Aa
CG43133
CG1724
CG2924
Vml
CG2918
snu
Sid
CG33346
CG10222
flr
CG43693
vas
solo
TfIIS
ck
CG33679
PDZ-GEF
CG12009
Dll
CG42851
SP555
CG14042
Adgf-E
His2A:CG33865
His2A:CG33862
His2A:CG33850
His2A:CG33847
His2A:CG33844
His2A:CG33841
His2A:CG33838
His2A:CG33835
His2A:CG33832
His2A:CG33808
cnir
SerRS
CG17260
CG17258
CG17221
GABPI
CG33128
CG31928
CG31926
CG31661
Asator
bun
RapGAP1
sky
RPA2
Mtp
CG9272
CG43739
CG9782
wcy
CG4955
CG4949
mam
mthl2
TM9SF3
Eaf6
Pex3
Pdi
CG32147
FucTA
CG1090
glu
LSm7
ChLD3
BuGZ
Usp47
DnaJ-1
knrl
CG12853
ADPS
Lap1
CG31076
CG31075
TwdlC
CG7276
CG7275
CG13455
CG12355
lbm
Tsp42El
Tsp42En
salr
MESK2
CG43290
nxf4
CG31496
Tsp68C
Hml
CG8757
CG8750
CG17169
CG17162
CG17159
Ldh
CG31909
cpo
Rim
su(w[a])
TfIIA-S-2
CG14631
Ugt37B1
CG42268
Ptpmeg2
CG3106
for
Rrp46
Irp-1B
CG6345
CG7381
Paip2
CG7091
CG31342
asl
Gr59d
Gr59c
mRpL2
Ufd1-like
NaPi-III
FoxK
pav
CG14997
ImpL2
Prp31
Msh6
CG7011
CG6878
gammaSnap2
ATPsynepsilonL
knk
PsGEF
CG12689
CG7094
ect
CG13699
Cluap1
CG17600
CG17598
CG17601
Spn77Ba
Spn77Bb
Lk6
Tpst
CG46311
CG32633
RpS11
CG8858
Pax
lectin-37Db
lectin-37Da
Lectin-galC1
CG7573
Gp150
CG43206
Lsd-2
CG9065
CG5599
CG33178
CG33177
CG15027
Smyd5
Oga
Nelf-A
CG3337
shot
DJ-1alpha
Yip1d1
Vha68-1
Tor
mbl
wgn
Men
Pde1c
CycY
Gr98d
Gr98c
Gr98b
CG1421
CG1428
piwi
TTLL4A
CG12253
CG6330
His3:CG33830
His3:CG33827
His3:CG33824
His3:CG33821
His3:CG33818
CG5890
CG5886
CG14545
CG3358
CkIIalpha-i3
CG13896
CG13895
vri
Sox21a
THADA
CG14731
Tak1
CG42579
His4:CG33909
His4:CG33905
His4:CG33903
His4:CG33901
His4:CG33889
His4:CG33887
His4:CG33885
His4:CG33883
His4:CG31611
CG14903
CG14891
RagA-B
CG11970
CAHbeta
CG8818
CG8569
CG33632
CG9304
CG34029
Nmdar1
CG43845
Rbp6
CG6512
dpr20
futsch
Rh50
Chs2
ro
T48
CG5500
Nhe2
CG46307
sbr
scramb1
RpI135
CG4213
CG32055
par-1
RpL37b
CG9876
CG42703
CG2111
sev
Cib2
stg
SP1029
CG45544
CG8945
CG4991
CG16700
Acp62F
CG14907
modSP
CG14906
CG33226
CG30287
CG30286
CG30283
CG12773
CG11417
png
cype
TotM
Ncoa6
CG14022
tou
ppk7
ppk14
CG9500
Lasp
Dab
CG43954
pk
CG30384
chif
CG4455
CG42231
DNaseII
CG7794
CG7785
CG3091
CG3078
temp
CG3071
nmdyn-D6
mRpS25
CG14414
fal
Gbs-76A
CG8728
CG34430
CG30380
CG30379
CG34431
Mbs
Diap1
Aps
velo
Ist1
CG8549
Cpr67Fb
RpS3A
Sytalpha
Oli
CG6870
CG12075
RhoGEF64C
CG7514
CG18418
CG15876
axo
CG4293
Appl
Mef2
CG8306
CG5089
Vha13
Nup58
CG6195
CG31220
CG31219
Zasp66
GAPsec
CG11873
Nuak1
CG42354
Tpi
CG31029
Tsp96F
CG3588
sick
SppL
Victoria
TotF
l(3)mbn
Socs36E
CG5783
CG17681
CG15155
CG13970
Loxl1
CG11334
CG11333
Inos
fa2h
CG33120
CG31752
CG10600
Npc2b
Reck
vnc
CG6674
CG42455
dpr6
CG34342
ZnT77C
ND-39
CG32425
CG18281
fuss
Pif1
Pgant4
CG31776
Abl
goe
Twdlalpha
Prm
Fhos
CG13306
zip
uzip
CG12986
CG3092
CG9692
CG13323
yellow-d2
yellow-d
Golgin245
CG32452
ArfGAP3
CG11370
caps
Son
Kap-alpha3
CG9399
CG9396
CG16790
Dh31-R
CG4734
CG17047
CG6465
Ubr1
side-VI
SrpRbeta
CG6511
CG32022
BBS4
CG13566
alpha-Catr
CG16787
Fmo-1
Alas
Pez
Cpr
CG7509
CG18808
RpS28a
Mgat2
Axn
CG12926
GstT2
Gmap
CG13192
bark
CG31960
ppl
pzg
CG12974
shep
wit
Faa
CG32259
CG30076
E(Pc)
mRNA-cap
CG32599
mud
Cdlc2
CG33923
CG33922
CG14610
Fer1
CG4829
pkaap
crp
CG17329
CG13258
QC
CG32413
CG13288
CG10486
CG45065
CG45064
slif
CG15309
CG14072
His3.3B
fh
Bap111
mtd
CG7367
baf
rtv
Lint-1
Dlic
RpS9
CG3408
CG33703
CG33702
beta3GalTII
Gle1
Vps25
mus304
RpIIIC53
CG7341
CG32195
RpL37a
hwt
CG9926
CG31517
Art9
Art6
CG6966
Toll-7
Xrp1
CG10512
CG33056
CG33054
Poc1
CG10171
CG43867
CG3713
CG14635
CG12869
CG7956
kug
Tom20
Gabat
CG7668
CG15765
AgmNAT
CG44329
Ufl1
CG1943
CG34054
CG30026
CG7763
CG43778
CG5504
Sesn
CG46429
Alg3
CG43336
CG43335
CG14851
CG14850
Cys
CG8087
CG8066
CG31313
CG14852
ball
Lerp
IntS12
His2Av
SPARC
tbrd-1
TfIIA-S
Pli
CG31191
Atpalpha
sgg
lz
c11.1
scaf
Cndp2
Naprt
Pen