ChIP-Atlas: Target genes

Potential target genes for CTCF

Query protein: CTCF
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX14474253 | Cultured cell lines
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CTCF's Target genes

◢ CTCF: Average

◢ SRX11499361: 0-14h embryos

◢ SRX11499362: 0-14h embryos

◢ SRX11499363: 0-14h embryos

◢ SRX11499364: 0-14h embryos

◢ SRX11499365: 0-14h embryos

◢ SRX11499366: 0-14h embryos

◢ SRX11499367: 0-14h embryos

◢ SRX11499368: 0-14h embryos

◢ SRX287743: 14-16h embryos

◢ SRX287744: 14-16h embryos

◢ SRX474576: 5-13h embryos

◢ SRX474577: 5-13h embryos

◢ SRX474578: 5-13h embryos

◢ SRX671941: 5-13h embryos

◢ SRX7889132: Central Nervous System

◢ SRX7889133: Central Nervous System

◢ SRX7889134: Central Nervous System

◢ SRX7889135: Central Nervous System

◢ SRX7889142: Central Nervous System

◢ SRX9660889: Central Nervous System

◢ SRX9660890: Central Nervous System

◣ SRX14474253: Cultured cell lines

◢ SRX14474261: Cultured cell lines

◢ SRX14474277: Cultured cell lines

◢ SRX14474281: Cultured cell lines

◢ SRX2010897: Embryos

◢ SRX6780074: Embryos

◢ SRX645427: Eye-antennal disc

◢ SRX085404: Kc167

◢ SRX085405: Kc167

◢ SRX085406: Kc167

◢ SRX100250: Kc167

◢ SRX100251: Kc167

◢ SRX1021223: Kc167

◢ SRX252226: Kc167

◢ SRX749039: Kc167

◢ SRX749040: Kc167

◢ SRX749041: Kc167

◢ SRX016158: S2

◢ SRX016160: S2

◢ SRX191913: S2

◢ SRX191914: S2

◢ SRX2638363: S2

◢ SRX2638364: S2

◢ SRX027388: White prepupae

◢ CTCF: STRING

CG5062
wcy
CG4955
CG4949
Ubr1
CG1354
CARPB
CG43407
Acp76A
sr
salr
Cib2
mib1
Abd-B
gsb-n
GlyP
CG4259
wor
CG44869
fl(2)d
CG6329
CG13339
Rubicon
CAH3
CG13465
BobA
vvl
mRpS33
CG31279
CG17565
CG14881
ftz-f1
CG5151
CG34112
CG9855
CG9853
CG14647
galectin
CG11374
Fas3
sgg
Pdp1
CG3662
PGAP2
Clp
CG15880
Saf6
Pex12
Toll-7
Lasp
Dab
CG43954
Svil
CG43693
Nc73EF
Cpr73D
CG10041
CG10038
Myd88
mub
CG9896
Pde1c
CycY
RpS21
CG3104
CG2991
caps
primo-2
primo-1
kmr
CG31469
Ubc87F
ZnT77C
ND-39
CG32425
CG18281
alpha-Man-IIb
stl
CycB
Ptpmeg2
CG3106
lectin-28C
CG14535
TwdlE
Tlk
NLaz
CG31659
Vha44
Hmgs
Drp1
Arpc5
CG14947
Mef2
mRpL2
Ufd1-like
NaPi-III
FoxK
MESK2
CG4020
CG12236
CG12398
fiz
CG14406
CASK
prd
CG3808
CG18135
egl
CG34105
CG13560
CG12491
CG11300
scpr-B
scpr-A
CG5214
CG17734
HisRS
CG6470
Bx
CG6481
Ggt-1
shot
DJ-1alpha
bun
Synd
CG31223
AdSS
CG13192
CG10947
CG10949
Arpc2
Dhap-at
CG5112
CG33494
unc-5
CG34172
CG10874
mthl14
E(bx)
Usp47
DnaJ-1
CSN3
CG13255
CG11456
pkaap
crp
CG17329
CG13258
svp
N
CG3588
CG34268
mtd
CG31538
CG33120
CG31752
CG10600
Got1
mus304
RpIIIC53
CG7341
CG32195
eIF3d1
GILT3
GILT2
CG18754
CG16710
esn
CG12863
Had2
Gmap
Tpst
CG46311
CG32633
Dll
sky
RPA2
Mtp
CG9272
CG43739
capu
CG31275
His2A:CG33865
His2A:CG33862
His2A:CG33850
His2A:CG33847
His2A:CG33844
His2A:CG33841
His2A:CG33838
His2A:CG33835
His2A:CG33832
Irk1
Lmpt
Nrt
pk
Spn43Ad
Spn43Ab
Spn43Aa
CG12828
Pez
Cpr
scyl
ap
CG3358
l(2)10685
MFS3
Sprn
CG5906
CCDC151
InR
lz
c11.1
par-1
Smyd5
Oga
Nelf-A
CG3337
Indy
RpLP2
Cdk4
CG8311
RpS28a
Mgat2
Axn
vri
Sur-8
CG42824
CG42823
CG42798
CG34280
CG34279
CG34313
CG32832
CG31743
CG31522
dnt
CG13086
stc
CG15269
stg
SP1029
CG45544
chif
CG4455
CG42231
E(Pc)
Oatp74D
CG6333
Rrp46
Irp-1B
CG6345
velo
Ist1
CG8549
CG15403
CG42814
CG42813
Aps
Cpr67Fb
Ent2
CG9596
IFT52
COX5BL
COX5B
Fancm
CG3546
CG3527
CG11444
CG11436
betaCOP
Tsf1
mthl2
TM9SF3
Eaf6
pyd
osk
CG16721
Usp30
Mbs
Diap1
lectin-46Cb
CG1648
lectin-46Ca
CG34033
CG30001
gcm
Mtpalpha
CG31709
CG13690
RpLP1
CG13692
CG11885
BBS8
Rlip
CG5697
CG32295
Spn
nAChRalpha6
Fkbp59
CG4537
CG34183
PK1-R
CG9920
CCHa1
Cyp6a18
Dif
CG5043
CG33928
galla-2
OXA1L
CG6409
Cpr67Fa1
Rich
Ddx1
Csp
CG11523
Acp62F
prage
Adar
l(1)G0469
l(1)G0007
CG9344
CG9313
CG34115
CG15650
CG15649
Sarm
CG42591
CG42590
Pex3
Pdi
CG32147
FucTA
Gss2
Gss1
mnb
CG12985
CG6788
Pif1
Pgant4
CG31776
dsx
RpL7
Ripalpha
CG34159
Sur
CG31191
Atpalpha
dco
Sox100B
rswl
Prp19
CG5189
CG30120
CG31140
GluProRS
AP-1sigma
sced
Dpit47
Adf1
beat-IIIc
ball
Lerp
IntS12
His2Av
SPARC
Nedd4
Edc3
eg
CG43895
Prp31
Msh6
CG7011
CG6878
CG2841
CG33144
CG9650
Pop2
Grip163
CG6928
tbrd-1
TfIIA-S
Pli
His3.3B
fh
Bap111
zip
uzip
CG5890
CG5886
CG14545
CG9593
CG1688
fru
Loxl1
CG11334
CG11333
Obp99d
Obp99b
Dup99B
CG15506
upd2
Pde8
Atf3
muc
CG1142
CG9932
ush
His2A:CG33808
CG34460
CG42495
DCX-EMAP
dbe
aru
PNUTS
RhoGEF3
dikar
Awh
JYalpha
mRpL14
Raf
CG14903
CG14891
CG8818
CG8569
CG33632
RpS11
CG8858
SrpRbeta
CG6511
CG32022
vir-1
CG6405
CG6388
CG5446
fal
Gbs-76A
jim
CG45428
CG11226
mam
CG18371
CG9005
pnt
DNApol-epsilon255
Jafrac1
CG33285
SmydA-4
CG12617
mIF2
Ppn
tzn
Spc105R
CG3698
Kdm2
Nmdmc
Mst85C
cm
CG4593
CG42308
CG32736
CG3032
CG8306
CG5089
Pms2
CG34325
CG32572
Reg-2
CG13893
CG17698
Nmdar1
CG43845
LanB2
Hr3
CG46321
Lim1
shn
CG13229
Gug
CG6983
Mccc1
Acf
snu
Sid
CG33346
can
Or67d
CG33958
CG31076
CG31075
TwdlC
tey
cindr
wts
dj-1beta
cv-2
CG10795
fray
CG7694
CG34232
CG13177
Oda
SmD3
nord
Bub1
Bsg25D
Wdr62
CG31663
CG15358
CG12075
CG6123
CG6106
Vha13
Nup58
CG6195
CG31220
CG31219
Sox21a
CG32521
CG1494
CG9304
CG34029
cib
brn
Xpac
CG6379
CG15375
CG13280
mdy
RhoGAP100F
Rift
FeCH
Ca-beta
Vm32E
nej
Cln7
qm
Srp19
CG14834
GstD4
GstD3
GstD2
GstD9
GstD10
GstD1
Tim17a1
Nepl18
Nepl17
C15
nrv2
CG43610
CG17376
CG17377
fz4
CAP
SCAP
CG14591
nrv1
CG4822
ich
Top1
dah
Ids
CG12012
CG9331
CheB38c
CheB38a
CheB38b
Tet
pyx
CG33229
dve
CG3092
milt
CG13689
CG5504
Sesn
CG46429
Alg3
Exn
Cp1
CG42806
PheRS-m
Rpn13
glu
LSm7
ChLD3
BuGZ
Fas1
CG14905
Pax
lectin-37Db
lectin-37Da
Lectin-galC1
Act5C
tara
Trf2
lawc
PIG-T
Pgk
Bacc
bi
cort
Spn27A
Nse1
CG34310
rols
zld
CG42354
CG42353
repo
mRpS18C
CG2218
CG15536
CG15535
CG15533
CG42740
CG2217
mthl1
SNRPG
RpS19a
Rok
CG9777
yin
CG2930
numb
CG3769
RpS28-like
CG33723
SNF4Agamma
Lk
CG42758
CG34039
Eglp2
IM18
Eglp3
Eglp1
CG43209
CG42560
CG42559
CG10332
CG10481
ebi
AP-2alpha
Prm
Fhos
CG13306
rn
CG42544
betaTub60D
PDZ-GEF
CG42747
Poc1
CG10171
CG14110
yem
Ctl2
CG34347
NetA
ss
CG12009
CG31145
CG13868
tapas
CG13871
jp
brwl
CG46468
CG33226
CG30287
CG30286
CG30283
Wnt4
CG34289
rasp
CG15812
ND-30
Ugt36A1
CG15418
CG12853
ADPS
Lap1
opa
HmgD
HmgZ
CG5674
Atxn7
Eogt
CG3609
CG3597
CG15390
kon
Tak1
CG42579
RapGAP1
htk
shop
ham
cdc14
LanB1
tun
CG8249
CG12970
slbo
Unc-115a
Unc-115b
p24-2
CG32939
CG18542
beta3GalTII
Gle1
Vps25
RpS7
CecB
CecA2
CecA1
Anp
SP1173
CG6891
CCKLR-17D3
Moe
Trc8
tsh
E2f1
CG34260
Drgx
CG42268
CG15556
Gycbeta100B
E5
side-VIII
CG43980
stw
Alp13
bor
asun
wdp
CG5819
pst
Sec63
CTCF
HP5
CG43155
ana
His4:CG33909
His4:CG33905
His4:CG33903
His4:CG33901
His4:CG33889
His4:CG33887
His4:CG33885
His4:CG33883
His4:CG31611
CG31690
CG43759
Sgs8
Sgs7
Sgs3
CG7512
Eip63E
Lrr47
Fatp1
rpk
Dlip2
Karybeta3
CG12007
Tsp96F
SppL
nos
CG5835
CG11779
skd
CG10584
Pdss2
Sin
tow
psq
Pen
Cpr31A
CG33301
NKCC
Ufl1
CG1943
Antp
phyl
Oaz
CG3556
twi
CG42741
CG2493
ect
Myo61F
Herc4
CG9184
sturkopf
CG7509
CG18808
per
HLH3B
CG2652
Glut4EF
Patj
dlt
alpha-Spec
Cdc37
CG12020
RpL37a
CG11873
CG31909
Spn75F
beat-IIIa
CG34106
CG31784
spirit
CG12111
CG12065
Pcf11
Cyp6a23
Cyp6a22
Cyp6a17
CG43796
CG32816
CG13088
CG43400
Son
Kap-alpha3
CG9399
CG9396
CG16790
daw
Syt1
pdm3
fs(1)Ya
dwg
vilya
waw
bbx
Sep1
hts
Dys
RtcB
CG13085
Alp12
Eip74EF
zf30C
und
Taf11
Spindly
IFT57
kay
CG42663
wuc
Ldh
sim
Men
Syx6
CG9084
CG7737
px
gas
pbl
CG8281
CG8111
CG32368
Idh3a
CoRest
dnc
Or59a
CG43795
St4
CG18568
mbl
CG13023
CG11905
Start1
Fcp1
CG3511
Mob2
CG6903
CG4041
CG32264
rumi
Usp12-46
CG7029
CG15414
bnl
CG31459
Doc2
fax
TMS1
GluRS-m
CG31406
jumu
Rh5
Hacd1
Nfs1
CG18787
mlt
CG4914
Pepck2
Akap200
CG13398
CG13397
Pepck1
CG45087
Rgk2
Phlpp
l(2)37Bb
Rpn3
CG10492
CG4496
ATP8B
spn-F
qless
mRpL32
CG1750
Tsp
Mmp2
Rala
l(1)G0320
RpS28b
CG32700
grn
Snoo
Rpp25
Tdc1
CG15909
Moca-cyp
scra
blow
CG1360
Asator
bbg
mtSSB
CG6126
CG31287
18w
Tim17b1
nsl1
c(3)G
Acyp2
CG30069
retm
frj
trn
Mes2
MEP-1
CG42245
Pxn
Eh
CG9171
CG17078
smo
mbm
CG11555
CG9018
ACXD
sdt
futsch
Rgk3
ASPP
blw
CG42260
Sox14
PPP1R15
CG1146
CG32246
CG5953
pdm2
CG3655
twz
Smyd4-4
SkpB
CG18343
OSCP1
Hen1
Men-b
CG6051
Rpi
Mthfs
CG9875
CG3500
CG34423
msn
dos
RpL8
CG9512
pyr
CG8170
for
Galphao
CG12895
CG1421
AdamTS-A
CG11629
rgn
Pura
hth
cnn
cbs