ChIP-Atlas: Target genes

Potential target genes for CTCF

Query protein: CTCF
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX749040 | Kc167
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CTCF's Target genes

◢ CTCF: Average

◢ SRX11499361: 0-14h embryos

◢ SRX11499362: 0-14h embryos

◢ SRX11499363: 0-14h embryos

◢ SRX11499364: 0-14h embryos

◢ SRX11499365: 0-14h embryos

◢ SRX11499366: 0-14h embryos

◢ SRX11499367: 0-14h embryos

◢ SRX11499368: 0-14h embryos

◢ SRX287743: 14-16h embryos

◢ SRX287744: 14-16h embryos

◢ SRX474576: 5-13h embryos

◢ SRX474577: 5-13h embryos

◢ SRX474578: 5-13h embryos

◢ SRX671941: 5-13h embryos

◢ SRX7889132: Central Nervous System

◢ SRX7889133: Central Nervous System

◢ SRX7889134: Central Nervous System

◢ SRX7889135: Central Nervous System

◢ SRX7889142: Central Nervous System

◢ SRX9660889: Central Nervous System

◢ SRX9660890: Central Nervous System

◢ SRX14474253: Cultured cell lines

◢ SRX14474261: Cultured cell lines

◢ SRX14474277: Cultured cell lines

◢ SRX14474281: Cultured cell lines

◢ SRX2010897: Embryos

◢ SRX6780074: Embryos

◢ SRX645427: Eye-antennal discs

◢ SRX085404: Kc167

◢ SRX085405: Kc167

◢ SRX085406: Kc167

◢ SRX100250: Kc167

◢ SRX100251: Kc167

◢ SRX1021223: Kc167

◢ SRX252226: Kc167

◢ SRX749039: Kc167

◣ SRX749040: Kc167

◢ SRX749041: Kc167

◢ SRX016158: S2

◢ SRX016160: S2

◢ SRX191913: S2

◢ SRX191914: S2

◢ SRX2638363: S2

◢ SRX2638364: S2

◢ SRX027388: White prepupae

◢ CTCF: STRING

His2A:CG33865
His2A:CG33862
His2A:CG33850
His2A:CG33847
His2A:CG33844
His2A:CG33841
His2A:CG33838
His2A:CG33835
His2A:CG33832
His2A:CG33808
His4:CG33909
His4:CG33905
His4:CG33903
His4:CG33901
His4:CG33889
His4:CG33887
His4:CG33885
His4:CG33883
His4:CG31611
Sox100B
dco
Mef2
CkIIalpha-i3
CG13896
CG13895
Sox21a
ush
CG34384
sgll
CG31473
CG2993
phyl
Oaz
htk
shop
sbr
RapGAP1
CG43693
wgn
Cib2
CG15615
Tak1
CG42579
Aps
nej
Tpst
CG46311
CG32633
snu
Sid
CG33346
pdgy
eag
CG9030
Ldh
nrv2
CG43610
CG17376
unc-5
CG12863
mtSSB
CG6126
CG31287
CG34268
gol
Ama
bcd
PDZ-GEF
Pzl
Sur-8
CG42824
CG42823
CG42798
CG34280
CG34279
Reg-2
CG13893
CG1354
CARPB
Gr89a
Decay
Cad89D
Npc2b
bor
asun
CG8306
CG5089
His2B:CG33908
His2B:CG33906
His2B:CG33900
His2B:CG33888
His2B:CG33886
His2B:CG33884
His2B:CG33880
His2B:CG33878
His2B:CG33876
His2B:CG33874
His2B:CG33872
His2B:CG33870
His2B:CG33910
His2B:CG33904
His2B:CG33902
His2B:CG33898
His2B:CG33896
His2B:CG33894
His2B:CG33892
His2B:CG33890
His2B:CG33882
His2A:CG33829
His2A:CG33826
His2A:CG33823
His2A:CG33820
His2A:CG33817
His2A:CG33814
His2A:CG31618
His1:CG33813
His1:CG31617
His1:CG33864
His1:CG33849
His1:CG33846
His1:CG33843
His1:CG33840
His1:CG33837
His1:CG33804
Wnt4
CG43290
nxf4
CG31496
CG31909
CG14974
CG10359
CG10357
CG44439
CG14760
CG7956
CG33226
CG30287
CG30286
CG30283
CG13970
CG3358
CG12986
CG33120
CG31752
CG10600
CG9171
CG12007
vir-1
CG6405
CG6388
CG5446
BBS4
Prm
Fhos
CG13306
HisRS
CG6470
Bx
CG6481
Ggt-1
Syn2
pkaap
crp
CG17329
rtv
Lint-1
Dlic
CG13258
ind
CG43680
CG43679
CG43678
CG18581
CG13461
CG12310
CG42354
CG42353
Zasp52
CG33465
galectin
CG11374
otp
CAH15
Obp99d
Obp99b
Dup99B
CG15506
Sfp84E
Os-C
CD98hc
CG13280
mdy
CG34281
CG14327
CG14326
CG14324
CG14323
Nc73EF
Cpr73D
Pde8
cnn
cbs
Dys
CG15025
raskol
SrpRbeta
CG6511
CG32022
CG10481
CG43338
kl-5
shot
DJ-1alpha
for
ham
Pif1
Pgant4
CG31776
CG16721
Usp30
Indy
Men
upd2
Mtpalpha
gcm
CG31709
Svil
CG32295
Spn
CG10365
nau
CG10232
Ptpmeg2
CG3106
mRpS33
CG31279
CG17565
CG14881
mtd
Tim17b1
InR
CG6118
Act88F
DNaseII
CG7794
CG7785
Cpr100A
CG15545
Rubicon
CAH3
siz
CG34260
CG31036
CG15517
CG15515
RagA-B
CG11970
CAHbeta
Lk
CG42758
CG34039
Pde1c
CycY
CG34054
CG30026
CG7763
CG8818
CG8569
CG33632
CG31275
Spn28Da
CG7102
Spn28Db
RpS11
CG8858
CG13689
RpS28a
Mgat2
Axn
MED8
CG8929
Abd-B
CG14762
retm
frj
TfAP-2
Lsd-2
CG9065
CG5599
CG33178
CG33177
CG15027
His3:CG33830
His3:CG33827
His3:CG33824
His3:CG33821
His3:CG33818
His3:CG33866
His3:CG33863
His3:CG33860
His3:CG33857
His3:CG33854
His3:CG33851
His3:CG33848
His3:CG33845
His3:CG33842
His3:CG33839
His3:CG33836
His3:CG33833
His3:CG33815
His3:CG33812
His3:CG33809
His3:CG33806
His3:CG33803
His3:CG31613
lectin-28C
CG14535
TwdlE
Ptp61F
312
Sytalpha
Oli
CG6870
CG31191
Atpalpha
Rsbp15
Cog1
CG4860
CG17404
CG12256
Pdp1
CG7509
CG18808
Tsp68C
Hml
CG8757
CG8750
mRpS18C
CG2218
CG15536
CG15535
CG15533
CG42740
CG2217
TTLL4A
piwi
CG12253
Pex7
Arr2
CG8728
CG34430
CG30380
CG30379
CG34431
Tsp
Nhe3
CG11327
SP555
CG14042
CHES-1-like
CG15478
CG31960
bark
CG9896
TM9SF3
mthl2
Eaf6
Gpa2
CG10222
flr
sm
out
CG42753
CG43277
CG18367
lectin-46Cb
CG1648
CG1688
sced
Dpit47
Adf1
stc
CG15269
CG42784
l(3)mbn
CG34253
N
Eh
stg
SP1029
CG45544
CG6142
lace
eya
Ent2
CG9596
IFT52
COX5BL
COX5B
waw
Sep1
bbx
SNF4Agamma
cpo
Rim
CG42268
Cyp12e1
Eglp2
IM18
Eglp3
Eglp1
CG43209
CG42560
CG42559
CG10332
Poc1
CG10171
ben
Ste12DOR
CG13192
Fancm
OXA1L
galla-2
CG6409
Cpr67Fa1
CG33557
CG2990
scyl
Rlip
CG5697
mdlc
CG4390
CG17193
scpr-B
scpr-A
CG5214
CG17734
CG5568
CG18586
Lasp
Dab
CG43954
CG12617
Myd88
tzn
Spc105R
CG3698
CG5213
Gbs-76A
fal
Asator
Ufd1-like
NaPi-III
mRpL2
FoxK
Gp150
VhaAC39-2
unk
CG13829
TfIIA-S
tbrd-1
Pli
ftz-f1
Ca-beta
E(Pc)
Vm32E
CG43332
RpS26
Prp31
Msh6
CG7011
CG6878
Cyp318a1
Cyp311a1
abd-A
PNUTS
dbe
aru
CG17450
GCS2alpha
nAChRalpha6
Fkbp59
CG4537
CG34183
CG14903
CG14891
CG9220
Rgk3
ASPP
Wdr62
CG31663
CG15358
PGRP-LA
PGRP-LC
CG2493
RpS21
CG3104
CG2991
GILT3
GILT2
eIF3d1
CG18754
CG16710
CG12853
ADPS
Lap1
velo
Ist1
CG8549
dikar
mthl14
E(bx)
Pex3
Pdi
CG32147
FucTA
HnRNP-K
CG34205
CG11269
a
prage
Adar
CG14270
CG10804
CG10803
CG10802
Cpr76Bc
Cpr76Bb
Cpr76Ba
Eaat2
CG13962
CG42495
CG4020
CG12236
RpLP2
Cdk4
ome
CG43121
RSG7
Lmpt
Fs
scb
RpS7
CecB
CecA2
CecA1
Anp
PIG-K
east
ver
nst
Gcn5
eIF2beta
Pms2
CG14423
CG3603
CG17959
CG32264
RpL37a
CG10041
CG10038
shep
Smyd5
Oga
Nelf-A
CG3337
CG10947
CG10949
Arpc2
CG3546
CG3527
CG11444
CG11436
CG9344
CG9313
CG34115
CG15650
CG15649
CG33128
CG31928
CG31926
tara
Got1
dnt
CG13086
jp
CG46468
brwl
CG43206
CG34458
CG34457
RhoGEF64C
CG7514
CG18418
CG15876
axo
CG12398
fiz
CG14406
CG9512
Toll-7
CG3638
CG11403
RpL37b
CG9876
CG42703
Gr98d
Gr98c
Gr98b
slbo
Alp13
Mbs
Diap1
lectin-46Ca
CG34033
CG30001
CG44666
CG43711
CG43710
CG43709
PK1-R
CG9920
CCHa1
CG7458
His1:CG33801
His2B:CG17949
par-1
Cpr30B
CG17855
CG13113
TyrRII
CG14321
chas
TMS1
fax
GluRS-m
CG8188
Rich
Ddx1
Csp
CG11523
CG3556
Son
Kap-alpha3
CG9399
CG9396
CG16790
CG9988
CG10011
CG11659
CG11391
CG11407
Cyp309a2
Cyp309a1
CG18545
CG12592
CG9018
ACXD
Ufl1
CG1943
CG12926
GstT2
caps
CG15556
Bub1
Bsg25D
Gycbeta100B
His3.3B
fh
Bap111
wdp
CG5819
Eip74EF
wcy
CG4955
CG4949
Loxl1
CG11334
CG11333
stl
CycB
LSm7
glu
ChLD3
BuGZ
CG4822
RpS28b
l(1)G0320
CG32700
Snoo
CG7231
CG41562
cm
CG4593
CG42308
CG32736
CG3032
Mp
CG30076
Rrp46
Irp-1B
CG6345
Lerp
IntS12
His2Av
ball
SPARC
CG14218
CG14204
CG14219
Tom20
kug
Gabat
CG7668
Gmap
tow
Ntmt
CG46338
CG30010
CG5674
Lime
sev
CG1850
SNRPG
RpS19a
Rok
mthl1
CG31406
CG13690
Pax
ebi
AP-2alpha
RtcB
CG13085
Alp12
CG8519
Ubr1
CheB93b
CheB93a
CG7907
Cyp12a4
SMSr
smid
CG12009
CG15040
fl(2)d
CG6329
CG13339
rols
bin
CG4597
LanB2
Cp1
CG42806
PheRS-m
St4
CG18568
goe
Twdlalpha
Spn77Ba
Spn77Bb
CG10164
beat-IV
CG32457
beat-IIIc
Jafrac1
Tlk
Chs2
Jheh1
Jheh2
CG43070
Jheh3
CG43069
Ste:CG33247
Ste:CG33245
Ste:CG33244
Ste:CG33240
Ste:CG33239
Ste:CG33237
Ste:CG33236
Ste:CG33243
Ste:CG33242
Ste:CG33241
Ste:CG33238
fd102C
Gss2
Gss1
CG40813
ppl
pzg
CG12974
dpr20
CG8945
CG4991
CG16700
CG11873
CG14459
CG8112
Mst77Y-7
Mst77Y-13
CG45766
CG45765
CG45764
Obp56f
Obp56e
CG8517
Nrt
Panx
CG9485
CG32117
CG12520
eIF5B
CG46463
armi
Mo25
CG3092
stumps
CG7987
CG44094
Liprin-gamma
CG11298
pyd
Ste:CG33246
CG9005
His1:CG33852
His1:CG33807
His1:CG33819
His1:CG33810
His1:CG33861
His1:CG33858
His1:CG33855
sbb
CG4438
RpLP1
CG13692
CG11885
BBS8
CG7900
IMPPP
CG33470
CG13293
CSN3
CG13255
CG11456
Eo
CG9503
UGP
Pdxk
CG32040
CG32039
His2B:CG33868
His4:CG33869
His4:CG33881
His4:CG33879
His4:CG33877
Dhpr
bol
Use1
nwk
Muc68E
CG42397
CG14125
CG43896
Lectin-galC1
lectin-37Db
lectin-37Da
CG34028
Argk
Nf-YA
CG33926
Bet3
CG3529
nrm
bru2
CG43291
CG9616
CG15399
Or43a
CG7910
scramb1
TM4SF
CG4882
CG30069
CG7741
CG18336
Obp47b
CG42336
CG14947
nmdyn-D6
mRpS25
CG14414
Pka-R1
firl
Obp51a
OdsH
Maf1
CG12538
CG12506
CG13946
His1:CG33816
His4:CG33899
His4:CG33897
His4:CG33895
His4:CG33893
His4:CG33891
CG11883
His4:CG33875
His4:CG33873
His4:CG33871
teq
udd
Cul4
CG6052
zip
uzip
CG5890
CG5886
CG14545
Pop2
Grip163
CG6928
CG13465
BobA
NLaz
CG31659
Usp47
DnaJ-1
CG43980
Raf
mRpL14
CG17377
CG43658
Or67c
Snp
TotX
Pez
Cpr
CG13501
CG13500
CG4293
Appl
SIFaR
CG5504
GlyP
CG4259
Sesn
CG46429
Alg3
CG1077
Osi1
Had2
pan
Drp1
cindr
ppk7
ppk14
CG9500
mRNA-cap
CG32599
mud
Ppn
mIF2
rswl
Prp19
CG5189
CG30120
Sprn
CG5906
mRpL55
CG6040
cdi
ATPsynD
salr
RpIIIC53
mus304
Dll
CG7341
CG32195
bs
alpha-Man-IIb
Gug
CG9304
Or67d
can
CG6983
Cpr67Fb
CG9593
Vha13
Nup58
CG6195
CG31220
sky
CG42851
RPA2
Mtp
CG9272
CCDC151
Pcf11
Cyp6a23
Cyp6a22