ChIP-Atlas: Target genes

Potential target genes for CTCF

Query protein: CTCF
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX749039 | Kc167
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CTCF's Target genes

◢ CTCF: Average

◢ SRX11499361: 0-14h embryos

◢ SRX11499362: 0-14h embryos

◢ SRX11499363: 0-14h embryos

◢ SRX11499364: 0-14h embryos

◢ SRX11499365: 0-14h embryos

◢ SRX11499366: 0-14h embryos

◢ SRX11499367: 0-14h embryos

◢ SRX11499368: 0-14h embryos

◢ SRX287743: 14-16h embryos

◢ SRX287744: 14-16h embryos

◢ SRX474576: 5-13h embryos

◢ SRX474577: 5-13h embryos

◢ SRX474578: 5-13h embryos

◢ SRX671941: 5-13h embryos

◢ SRX7889132: Central Nervous System

◢ SRX7889133: Central Nervous System

◢ SRX7889134: Central Nervous System

◢ SRX7889135: Central Nervous System

◢ SRX7889142: Central Nervous System

◢ SRX9660889: Central Nervous System

◢ SRX9660890: Central Nervous System

◢ SRX14474253: Cultured cell lines

◢ SRX14474261: Cultured cell lines

◢ SRX14474277: Cultured cell lines

◢ SRX14474281: Cultured cell lines

◢ SRX2010897: Embryos

◢ SRX6780074: Embryos

◢ SRX645427: Eye-antennal discs

◢ SRX085404: Kc167

◢ SRX085405: Kc167

◢ SRX085406: Kc167

◢ SRX100250: Kc167

◢ SRX100251: Kc167

◢ SRX1021223: Kc167

◢ SRX252226: Kc167

◣ SRX749039: Kc167

◢ SRX749040: Kc167

◢ SRX749041: Kc167

◢ SRX016158: S2

◢ SRX016160: S2

◢ SRX191913: S2

◢ SRX191914: S2

◢ SRX2638363: S2

◢ SRX2638364: S2

◢ SRX027388: White prepupae

◢ CTCF: STRING

beat-IIIc
CG12863
Indy
siz
NLaz
CG31659
scyl
SNF4Agamma
Wnt4
Nc73EF
Cpr73D
for
CG31960
bark
Tlk
Rala
Abd-B
Prm
Fhos
CG13306
mthl14
E(bx)
CG3556
unc-5
CG9171
CG31275
lectin-28C
CG14535
TwdlE
CHES-1-like
CG15478
Sprn
CG5906
CCDC151
CG43693
TfAP-2
RapGAP1
tna
CG13280
mdy
RpS21
CG3104
CG2991
prage
Adar
CG10481
cm
CG4593
CG42308
CG32736
CG3032
Tsp68C
Hml
CG8757
CG8750
Ubr1
cindr
vir-1
CG6405
CG6388
CG5446
caps
abd-A
CG16721
Usp30
snu
Sid
CG33346
CG12869
Lasp
Dab
CG43954
CG44439
CG14760
Spn75F
DCX-EMAP
RpIIIC53
mus304
CG7341
CG32195
CG14270
CG10804
CG10803
CG10802
GlyP
CG4259
goe
Twdlalpha
Sfp36F
CG5790
CG43362
zip
uzip
shot
DJ-1alpha
ind
CG43680
CG43679
CG43678
CG18581
CG13461
CG12310
Nrt
shep
otp
CAH15
Calx
CG43446
Hk
dnt
CG13086
CG12007
CG4597
Bub1
Bsg25D
CG1354
CARPB
Sur-8
CG42824
CG42823
CG42798
CG34280
CG34279
Syn2
TfIIA-S
tbrd-1
Pli
PK1-R
CG9920
CCHa1
Or67d
can
CG6330
Tak1
CG42579
Pop2
Grip163
CG6928
Ama
bcd
Mbs
Diap1
Svil
Sox100B
dco
Mef2
CkIIalpha-i3
CG13896
CG13895
Ptpmeg2
CG3106
CG43290
nxf4
CG31496
Pif1
Pgant4
CG31776
CG7573
Got1
Mp
raskol
nrv2
CG43610
CG17376
Gbs-76A
fal
Galphao
CG12895
mRpS33
CG31279
CG17565
CG14881
ftz-f1
CG3546
CG3527
CG11444
CG11436
Nuak1
CG14903
CG14891
CG32295
Spn
phyl
Oaz
gol
Myd88
lace
Fancm
CG31909
CG7956
CG15556
Gycbeta100B
ZnT77C
ND-39
CG32425
CG18281
fl(2)d
CG6329
CG13339
CG1077
Osi1
RpS11
CG8858
CG42268
wcy
CG4955
CG4949
Ent2
CG9596
IFT52
COX5BL
COX5B
Jafrac1
Tsp96F
stl
CycB
Ufd1-like
NaPi-III
mRpL2
FoxK
CG31191
Atpalpha
CG8945
CG4991
CG16700
CG14416
His2B:CG33908
His2B:CG33906
His2B:CG33900
His2B:CG33888
His2B:CG33886
His2B:CG33884
His2B:CG33880
His2B:CG33878
His2B:CG33876
His2B:CG33874
His2B:CG33872
His2B:CG33870
His2B:CG33910
His2B:CG33904
His2B:CG33902
His2B:CG33898
His2B:CG33896
His2B:CG33894
His2B:CG33892
His2B:CG33890
His2B:CG33882
Spn28Da
CG7102
Spn28Db
lectin-46Cb
CG1648
Ldh
lectin-46Ca
CG34033
CG30001
Rubicon
CAH3
N
Lk
CG42758
CG34039
Unc-115a
Unc-115b
p24-2
CG32939
CG18542
Pdp1
RpL37b
CG9876
CG42703
sbr
Hers
Sox21a
Men
Tpst
CG46311
CG32633
Adgf-E
nej
Lmpt
Npc2b
CG5897
Alp13
scpr-B
scpr-A
CG5214
CG17734
nAChRalpha6
Fkbp59
CG4537
CG34183
CG34112
CG9855
CG9853
CG14647
Pde1c
CG4020
CycY
CG12236
Pax
RtcB
CG13085
Alp12
UGP
Pdxk
CG32040
CG32039
CG12617
OXA1L
galla-2
CG6409
Cpr67Fa1
CG34260
CG42354
CG42353
HnRNP-K
Gp150
Cyp12e1
InR
CG33226
CG30287
CG30286
CG30283
Toll-7
CG13192
Tsp
Nhe3
CG11327
Rlip
CG5697
CG8306
CG5089
Raf
mRpL14
RpLP2
Cdk4
E(Pc)
CG12986
Lectin-galC1
lectin-37Db
lectin-37Da
RpS28b
l(1)G0320
CG32700
stg
SP1029
CG45544
CG10041
CG10038
CG13970
nmdyn-D6
mRpS25
CG14414
PDZ-GEF
CG14947
BBS4
CG15615
CG5674
pkaap
crp
CG17329
Vsx2
Ntmt
CG46338
CG30010
Lime
Cib2
CG3092
GILT3
GILT2
eIF3d1
CG18754
CG16710
CG33120
CG31752
CG10600
l(3)mbn
Aps
CheB93b
CheB93a
CG7907
par-1
Pde8
Dys
CG15025
SP555
CG14042
sky
RPA2
Mtp
CG9272
CG43739
CG14974
CG10359
CG10357
lz
c11.1
CG3358
cpo
Rim
Pez
Cpr
CG14762
SNRPG
RpS19a
Rok
mthl1
CG9777
tzn
Spc105R
CG3698
CG31823
CG31821
chif
CG4455
CG42231
sgg
RpS7
CecB
CecA2
CecA1
Anp
velo
Ist1
CG8549
Rich
Ddx1
Csp
CG11523
CG13907
Usp10
CG12853
ADPS
Lap1
CG9304
CG34029
wgn
CG42495
CG12926
GstT2
CG43338
jp
CG46468
brwl
galectin
CG11374
SCAP
CG14591
Tbce
His3.3B
fh
Bap111
bun
pyd
osk
Reg-2
CG13893
HisRS
CG6470
Bx
CG6481
Ggt-1
CG5890
CG5886
CG14545
CG9005
CG34313
CG32832
CG31743
Usp47
DnaJ-1
His2A:CG33865
His2A:CG33862
His2A:CG33850
His2A:CG33847
His2A:CG33844
His2A:CG33841
His2A:CG33838
His2A:CG33835
His2A:CG33832
His2A:CG33808
His4:CG33909
His4:CG33905
His4:CG33903
His4:CG33901
His4:CG33889
His4:CG33887
His4:CG33885
His4:CG33883
His4:CG31611
RpS28a
Mgat2
Axn
Idh3a
CoRest
rtv
Lint-1
Dlic
Naprt
Lerp
IntS12
His2Av
ball
SPARC
Eh
prd
CG43658
mtSSB
CG6126
CG31287
CG2111
CG32264
sced
Dpit47
Adf1
CG4822
CG5062
slbo
sev
CG34384
sgll
CG31473
CG2993
Gle1
beta3GalTII
Vps25
waw
Sep1
bbx
Gbp2
CG43107
CG43103
Gbp1
CG13293
HP5
CG43155
Evi5
ham
RagA-B
CG11970
CAHbeta
capu
CG34274
pdgy
eag
CG9030
Mtpalpha
gcm
CG31709
Cpr76Bc
Cpr76Bb
Cpr76Ba
Wdr62
CG31663
CG15358
TyrRII
CG14321
CG9988
CG10011
Eaat2
LanB2
dikar
ect
CG6123
CG6106
stc
CG15269
Vha13
Nup58
CG6195
CG31220
CG31219
Sox102F
CG9344
CG9313
CG34115
CG15650
CG15649
CG6118
Act88F
CG12075
Loxl1
CG11334
CG11333
Smyd5
Oga
Nelf-A
CG3337
Ppn
mIF2
eya
Eip63F-1
CG12531
Eip74EF
Zasp52
CG33465
MED8
CG8929
CG5568
CG18586
CG13699
ppl
pzg
CG12974
CG2493
tara
CG17450
GCS2alpha
CG1688
CG13690
ebi
AP-2alpha
mtd
Tim17b1
CG34253
psq
Rab14
Pgant35A
l(2)34Fd
l(2)34Fc
CG43052
CG6142
CG12398
fiz
CG14406
Sfp84E
Os-C
CD98hc
CG10365
nau
CG10232
CG9512
Or49b
Cyp9h1
CG17575
antr
CG30486
mRpS18C
CG2218
CG15536
CG15535
CG15533
CG42740
CG2217
pav
CG14997
ImpL2
mRNA-cap
CG32599
mud
CG30076
mdlc
CG4390
CG17193
ppk7
ppk14
CG9500
Gug
CG6983
CG4293
Appl
RpL37a
CG34281
CG14327
CG14326
CG14324
CG14323
sim
TMS1
fax
CG13465
BobA
bor
asun
CG34268
TTLL4A
piwi
CG12253
LSm7
glu
ChLD3
BuGZ
CG12498
CG10947
CG10949
Arpc2
CG34435
CG34434
CG1724
Or98a
CG33557
CG2990
CG9896
CG15040
ush
RpI135
CG4213
Ptp61F
312
CG11873
cad
CG13689
Gr89a
Decay
Cad89D
tou
CG3091
CG3078
temp
CG3071
Obp99d
Obp99b
Dup99B
CG15506
Eglp2
IM18
Eglp3
Eglp1
CG43209
CG42560
CG42559
CG10332
PNUTS
dbe
aru
ver
nst
Gcn5
eIF2beta
htk
shop
Rsbp15
Cog1
CG4860
CG17404
CG12256
CG10222
flr
Gmap
gammaSnap2
ATPsynepsilonL
knk
Ca-beta
Vm32E
tun
CG8249
CG12970
upd2
DNaseII
CG7794
CG7785
CG5213
Snp
CG13501
CG13500
CG8728
CG34430
CG30380
CG30379
CG34431
RpLP1
CG13692
CG11885
BBS8
CG42814
CG42813
Rh5
Hacd1
Nfs1
CG18787
SerRS
cnir
CG17260
CG17258
CG17221
GABPI
Pex7
Arr2
CG7328
ome
CG43121
CG6903
CG4041
salr
Cp1
CG42806
PheRS-m
St4
CG18568
Lsd-2
CG9065
CG5599
CG33178
CG33177
CG15027
CG7276
CG7275
CG13455
CG12355
CG3638
CG11403
CG8854
CG44437
Xrp1
Fs
scb
mam
CG6839
CG14077
CG18223
hwt
TM9SF3
mthl2
Eaf6
Chs2
TotX
CG10960
CG12773
CG11417
png
CG14218
CG14204
CG14219
GstE12
CG3894
CG12848
RpS26
Prp31
Msh6
CG7011
CG6878
Pex3
Pdi
CG32147
FucTA
Panx
CG9485
PGRP-LA
PGRP-LC
Sytalpha
Oli
CG6870
dpr4
Spx
Rbcn-3A
CG33285
Pms2
CG7458
Crys
Or33c
Or33b
SrpRbeta
CG6511
CG32022
CG8818
CG8569
CG33632
Rgk3
ASPP
SteXh:CG42398
retm
frj
CG12009
bru2
Eo
CG9503
BEAF-32
Spred
CG7509
CG18808
Sh
Pzl
muc
Poc1
CG10171
Cpr100A
CG15545
CG42784
CG34458
CG34457
CG7367
baf
Ufl1
CG1943
SmydA-4
fred
CG43332
GluRS-m
sm
CG42753
CG43277
CG18367
hec
CG32642
CG9220
out
His1:CG33816
Dll
CG42851
Asator
SLO2
stj
Cyp6a18
CG31036
CG15517
CG15515
svp
Tgt
CG5126
CG5001
Rrp46
Irp-1B
CG6345
CG14423
CG3603
CG17959
CG10752
GEFmeso
CG42697
CG10927
Eip63E
Nepl18
Nepl17
CG1090
Mnt
Parg
Pen
Cpr31A
CG33301
CG9692
PIG-K
east
CSN3
CG13255
CG11456
Dlg5
CG4970
CG14930
CG14929
CG17746
CG12078
Men-b
CG6051
side-VI
CG8180
scrib
mbl
Vlet
bif
Irk1
HmgD
HmgZ
CngB
CG13962
CG43206
Yip1d1
Vha68-1
Tor
CG31008
CG31007
Manf
CG14879
rswl
Prp19
CG5189
CG30120
Nepl16
CG34027
CG13481
tow
Vha44
Hmgs
Gss2
Gss1
mnb
CG12985
CG6788
ND-75
CG1632
CG5504
Sesn
CG46429
Alg3
dpr20
CG12620
CG43980
CG32445
CG32444
Atox1
CG11131
BoYb
CG14459
CG32117
CG12520
Sirt4
CG4119
OtopLc
sr
futsch