ChIP-Atlas: Target genes

Potential target genes for CTCF

Query protein: CTCF
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX671941 | 5-13h embryos
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CTCF's Target genes

◢ CTCF: Average

◢ SRX11499361: 0-14h embryos

◢ SRX11499362: 0-14h embryos

◢ SRX11499363: 0-14h embryos

◢ SRX11499364: 0-14h embryos

◢ SRX11499365: 0-14h embryos

◢ SRX11499366: 0-14h embryos

◢ SRX11499367: 0-14h embryos

◢ SRX11499368: 0-14h embryos

◢ SRX287743: 14-16h embryos

◢ SRX287744: 14-16h embryos

◢ SRX474576: 5-13h embryos

◢ SRX474577: 5-13h embryos

◢ SRX474578: 5-13h embryos

◣ SRX671941: 5-13h embryos

◢ SRX7889132: Central Nervous System

◢ SRX7889133: Central Nervous System

◢ SRX7889134: Central Nervous System

◢ SRX7889135: Central Nervous System

◢ SRX7889142: Central Nervous System

◢ SRX9660889: Central Nervous System

◢ SRX9660890: Central Nervous System

◢ SRX14474253: Cultured cell lines

◢ SRX14474261: Cultured cell lines

◢ SRX14474277: Cultured cell lines

◢ SRX14474281: Cultured cell lines

◢ SRX2010897: Embryos

◢ SRX6780074: Embryos

◢ SRX645427: Eye-antennal disc

◢ SRX085404: Kc167

◢ SRX085405: Kc167

◢ SRX085406: Kc167

◢ SRX100250: Kc167

◢ SRX100251: Kc167

◢ SRX1021223: Kc167

◢ SRX252226: Kc167

◢ SRX749039: Kc167

◢ SRX749040: Kc167

◢ SRX749041: Kc167

◢ SRX016158: S2

◢ SRX016160: S2

◢ SRX191913: S2

◢ SRX191914: S2

◢ SRX2638363: S2

◢ SRX2638364: S2

◢ SRX027388: White prepupae

◢ CTCF: STRING

His2A:CG33865
His2A:CG33862
His2A:CG33850
His2A:CG33847
His2A:CG33844
His2A:CG33841
His2A:CG33838
His2A:CG33835
His2A:CG33832
His2A:CG33808
His4:CG33909
His4:CG33905
His4:CG33903
His4:CG33901
His4:CG33889
His4:CG33887
His4:CG33885
His4:CG33883
His4:CG31611
Sox21a
CG34384
sgll
CG31473
CG2993
His2B:CG33908
His2B:CG33906
His2B:CG33900
His2B:CG33888
His2B:CG33886
His2B:CG33884
His2B:CG33880
His2B:CG33878
His2B:CG33876
His2B:CG33874
His2B:CG33872
His2B:CG33870
His2B:CG33910
His2B:CG33904
His2B:CG33902
His2B:CG33898
His2B:CG33896
His2B:CG33894
His2B:CG33892
His2B:CG33890
His2B:CG33882
Cib2
CkIIalpha-i3
CG13896
CG13895
CG34268
ush
CG44666
CG43711
CG43710
CG43709
CG14974
CG10359
CG10357
dco
Sox100B
His1:CG33816
Cyp12a4
Cyp12a5
Jheh1
Jheh2
CG43070
Jheh3
CG43069
CG1354
CARPB
RapGAP1
His3:CG33830
His3:CG33827
His3:CG33824
His3:CG33821
His3:CG33818
His3:CG33866
His3:CG33863
His3:CG33860
His3:CG33857
His3:CG33854
His3:CG33851
His3:CG33848
His3:CG33845
His3:CG33842
His3:CG33839
His3:CG33836
His3:CG33833
His3:CG33815
His3:CG33812
His3:CG33809
His3:CG33806
His3:CG33803
His3:CG31613
CG10164
beat-IV
Mef2
CG12007
His1:CG33813
His1:CG31617
His1:CG33864
His1:CG33849
His1:CG33846
His1:CG33843
His1:CG33840
His1:CG33837
His1:CG33852
bor
asun
CG12506
CG13946
fd102C
TfAP-2
CG3358
CG44439
CG14760
CG43658
Wnt4
Ama
bcd
mtSSB
CG6126
CG31287
His1:CG33804
InR
CG43693
CG8306
CG5089
CG43290
nxf4
CG31496
rut
His1:CG33807
His1:CG33819
His1:CG33810
His1:CG33861
His1:CG33858
His1:CG33855
Ldh
otp
CAH15
Pif1
Pgant4
CG31776
toc
Gr89a
Decay
Cad89D
pst
Sec63
CTCF
CG45770
Aps
CG46193
unc-5
snu
Sid
CG33346
sbr
His2A:CG33829
His2A:CG33826
His2A:CG33823
His2A:CG33820
His2A:CG33817
His2A:CG33814
His2A:CG31618
nrv2
CG43610
CG17376
CG33120
CG31752
CG10600
htk
shop
His1:CG33801
lectin-28C
CG14535
TwdlE
CG31909
DNaseII
CG7794
CG7785
OdsH
His4:CG33869
fdl
CG30389
CG15657
Tpst
CG46311
CG32633
CG31275
CG13689
CG34028
rdx
Ir11a
His4:CG33899
His4:CG33897
His4:CG33895
His4:CG33893
His4:CG33891
His4:CG33875
His4:CG33873
His4:CG33871
sls
CG33309
CG3649
CG9826
His4:CG33881
His4:CG33879
His4:CG33877
Maf1
beat-IIa
bark
CG31960
Cyp309a2
Sws1
Rad1
CG41562
CG10887
Or69a
Stam
aurB
His2B:CG17949
MFS9
Tg
Glyat
CG43291
CG9616
mtt
Tak1
CG42579
uex
CG8112
His2B:CG33868
His1:CG33831
His1:CG33828
His1:CG33825
His1:CG33822
CheA84a
SPoCk
CG44623
CG7900
CG40813
CG7763
pb
CG3176
CG42810
CG42809
CG32816
Cyp6a21
Cyp6a8
shot
CG33128
CG31928
CG31926
SCAP
CG14591
Tbce
Muc26B
CG31639
CG12362
CG7741
CG18336
Obp47b
CG42336
5-HT2B
CG40045
GstE12
CG3894
CG12848
CG3880
CG12773
CG11417
png
CG4438
CG33641
CG33642
CG33640
His4:CG33907
His2A:CG33859
His2A:CG33856
His2A:CG33853
puc
CG12538
Snoo
EMC4
CG33170
CG33169
Arf79F
CG5084
CG10910
Muc68E
CG42397
CG14125
CG43896
Liprin-gamma
Mob2
CG7394
CG46412
CG33267
CG11298
Ac78C
Obp18a
prc
spdo
Or82a
Eip78C
CG33644
CG33643
CG7548
CG8539
CG12426
Dop1R2
CG30103
NT5E-2
CG43110
CG4080
CG11771
Trf4-2
Ir93a
for
dare
CG34196
CG33669
fz
spir
CG10947
CG14044
hoe2
Sgs1
CG7638
CG34012
CG32073
CG12522
Elo68beta
Elo68alpha
CG32071
CG17684
RpS2
Muc30E
CG42673
CG5756
CG32369
CG2233
CG1358
Mst77Y-9
Mst77Y-4
CG42249
TTLL1A
CG12446
sbb
Pde1c
CG45494
CG45493
CG45488
CG43784
CG45491
CG45489
Abd-B
Rubicon
CAH3
DJ-1alpha
N
CG12863
Svil
CG32295
CG16721
Ptpmeg2
CG3106
Usp30
Spn
CG10481
CHES-1-like
CG15478
Nc73EF
Cpr73D
prage
Adar
Indy
wgn
mRpS33
CG31279
CG17565
CG14881
stl
CycB
CG12986
Pde8
pkaap
crp
CG17329
CG4020
Ubr1
CycY
CG12236
wcy
CG4955
CG4949
Tsp68C
Hml
CG8757
CG8750
nej
lace
lectin-46Cb
CG1648
Dys
nAChRalpha6
Fkbp59
CG4537
CG34183
CG31191
Atpalpha
siz
RpS28a
Mgat2
Axn
CG33226
CG30287
CG30286
CG30283
Prm
Fhos
CG13306
PDZ-GEF
Fancm
CG14762
slbo
RpS21
CG3104
CG2991
Sur-8
CG42824
CG42823
CG42798
CG34280
CG34279
mthl14
E(bx)
vir-1
CG6405
CG6388
CG5446
beat-IIIc
SNF4Agamma
CG15025
CG7956
fal
Gbs-76A
CG9171
Lasp
Dab
CG43954
CG34260
CG13192
CG14903
CG14891
eIF3d1
GILT3
GILT2
CG18754
CG16710
CG1688
LanB2
Toll-7
rtv
Lint-1
Dlic
Wdr62
gol
l(3)mbn
Npc2b
CG31663
CG15358
sced
Eaat2
Eh
zip
uzip
CG13258
CG15615
ham
Dpit47
Adf1
scpr-B
scpr-A
CG3546
CG3527
CG11444
CG11436
CG5214
CG17734
CG5890
CG5886
CG14545
Got1
stc
CG15269
Pop2
Grip163
CG6928
RpL37a
Rrp46
Irp-1B
CG6345
ind
CG13465
BobA
CG13962
Asator
mRpL2
Ufd1-like
NaPi-III
FoxK
Gp150
CG10365
Spn28Da
CG7102
CG6118
CG43338
stg
SP1029
CG45544
NLaz
CG31659
Act88F
nau
CG10232
CG13280
Spn28Db
CG43680
CG43679
CG43678
CG18581
CG13461
CG12310
abd-A
CG9344
CG9313
CG34115
CG15650
CG15649
RpS11
CG8858
lectin-46Ca
CG34033
CG30001
CG12617
cpo
Myd88
Cpr100A
CG15545
tbrd-1
TfIIA-S
Pli
Lk
CG42758
CG34039
CG10222
Rim
CG12009
Syn2
CG9005
flr
mdy
Usp47
DnaJ-1
Ent2
CG9596
ball
Lerp
IntS12
His2Av
IFT52
COX5BL
COX5B
Tsp
caps
Nhe3
CG11327
CG42268
ftz-f1
SPARC
raskol
cm
CG4593
CG42308
CG32736
CG3032
CG12853
ADPS
CG15556
CG14270
CG10804
CG10803
CG10802
Cyp12e1
glu
LSm7
ChLD3
BuGZ
Bub1
Bsg25D
Mp
Jafrac1
Lap1
CG42354
phyl
Oaz
CG33557
CG2990
CG43980
Ca-beta
mRpL14
Raf
CG13690
HisRS
CG6470
Bx
CG42495
CG6481
CG13293
Tlk
CG8818
CG8569
CG33632
Cpr76Bc
Cpr76Bb
Cpr76Ba
E(Pc)
Vm32E
CG17377
Gycbeta100B
dnt
CG13086
scyl
Loxl1
CG11334
CG11333
Ggt-1
Rlip
CG5697
CG5568
CG18586
RagA-B
CG11970
CAHbeta
RpLP1
mthl2
TM9SF3
Eaf6
Lmpt
gcm
Mtpalpha
CG31709
pdgy
eag
CG9030
Or67c
Pax
Men
ppl
pzg
CG12974
CG43332
tzn
Spc105R
CG3698
Pex3
Pdi
CG32147
Snp
TotX
FucTA
Pez
Cpr
CheB93b
CheB93a
CG7907
par-1
Lsd-2
CG13501
CG13500
Eglp2
CG9018
ACXD
Ptp61F
312
CG9065
CG5599
CG33178
CG33177
CG15027
ome
CG43121
CG10041
mRpS18C
CG2218
CG15536
CG15535
CG15533
CG42740
CG2217
CG10038
SrpRbeta
CG6511
CG32022
Reg-2
CG13893
RpS26
shep
Ufl1
CG1943
CG4293
Appl
Rich
Ddx1
Csp
CG11523
CG42353
Sfp84E
Os-C
CD98hc
SIFaR
Cpr30B
CG17855
CG13113
CG5504
GlyP
CG4259
CG3556
RpLP2
Cdk4
Sytalpha
Oli
CG6870
CG3638
Sesn
CG46429
Alg3
CG11403
IM18
Eglp3
Eglp1
CG43209
CG42560
CG42559
CG10332
CG7509
Pdp1
His3.3B
Nrt
Poc1
CG10171
velo
fh
Bap111
mtd
CG1077
TyrRII
galla-2
Osi1
OXA1L
CG6409
CG13970
Smyd5
Oga
Nelf-A
CG3337
Cpr67Fa1
CG15040
Rsbp15
Cog1
CG4860
CG17404
CG12256
Fs
Prp31
Msh6
CG7011
CG6878
CG14321
CG10949
Arpc2
PGRP-LA
CSN3
CG13255
CG11456
scb
CG34281
CG14327
CG14326
CG14324
CG14323
dpr20
CG9220
Had2
pan
sm
Drp1
RpL37b
CG9876
CG42703
retm
frj
cindr
Alp13
ppk7
ppk14
CG9500
CG32264
fl(2)d
CG6329
CG13339
jp
brwl
CG46468
CG18808
mthl1
SNRPG
RpS19a
Rok
CG42784
waw
bbx
Sep1
lectin-37Db
lectin-37Da
Lectin-galC1
mRNA-cap
CG32599
mud
RpS7
CecB
CecA2
CecA1
Anp
mIF2
Ppn
east
PIG-K
PK1-R
CG9920
CCHa1
Mbs
Diap1
rswl
Prp19
CG5189
CG30120
dbe
aru
PNUTS
Zasp52
CG33465
ebi
AP-2alpha
Sprn
CG5906
Obp99d
Obp99b
Dup99B
CG15506
mRpL55
cdi
CG6040
ATPsynD
Ist1
CG8549
RtcB
CG13085
Alp12
CG13692
CG11885
BBS8
salr
mus304
RpIIIC53
Dll
CG7341
CG32195
Son
Kap-alpha3
CG9399
CG9396
CG16790
PGRP-LC
bs
alpha-Man-IIb
Gug
Cp1
CG9304
CG5213
CG42806
mdlc
CG4390
CG17193
can
Or67d
CG6983
Cpr67Fb
wdp
CG9593
CG6142
PheRS-m
Vha13
Nup58
CG6195
CG31220
sky
CG9988
CG10011
CG42851
RPA2
Mtp
CG9272
upd2
CCDC151
Pcf11
Cyp6a23
Cyp6a22
Cyp6a17
CG43739
Vsx2
su(w[a])
TfIIA-S-2
CG14631
SP555
CG14042
St4
CG18568
CG9896
CG31219
CG5819
out
Spn75F
CG12398
ver
nst
eIF2beta
Gcn5
fz4
dikar
Rgk3
ASPP
HnRNP-K
CG42753
CG43277
CG18367
Galphao
CG12895
Tim17b1
CG34054
CG30026
kug
Tom20
Gabat
CG7668
piwi
TTLL4A
CG12253
CG43206
Pex7
Arr2
CG2493
SP1173
CG34435
CG34434
CG34029
Sox102F
cnn
cbs
Panx
CG9485
psq
CG31036
CG15517
CG15515
Cyp318a1
Cyp311a1
Rala
CG8945
CG4991
CG16700
CG17450
CG13907
DCX-EMAP
GCS2alpha
CG11873
CG34458
CG34457
CG8728
CG34430
CG30380
CG30379
Usp10
rols
CG34431
CG43867
elgi