ChIP-Atlas: Target genes

Potential target genes for CTCF

Query protein: CTCF
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1021223 | Kc167
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CTCF's Target genes

◢ CTCF: Average

◢ SRX11499361: 0-14h embryos

◢ SRX11499362: 0-14h embryos

◢ SRX11499363: 0-14h embryos

◢ SRX11499364: 0-14h embryos

◢ SRX11499365: 0-14h embryos

◢ SRX11499366: 0-14h embryos

◢ SRX11499367: 0-14h embryos

◢ SRX11499368: 0-14h embryos

◢ SRX287743: 14-16h embryos

◢ SRX287744: 14-16h embryos

◢ SRX474576: 5-13h embryos

◢ SRX474577: 5-13h embryos

◢ SRX474578: 5-13h embryos

◢ SRX671941: 5-13h embryos

◢ SRX7889132: Central Nervous System

◢ SRX7889133: Central Nervous System

◢ SRX7889134: Central Nervous System

◢ SRX7889135: Central Nervous System

◢ SRX7889142: Central Nervous System

◢ SRX9660889: Central Nervous System

◢ SRX9660890: Central Nervous System

◢ SRX14474253: Cultured cell lines

◢ SRX14474261: Cultured cell lines

◢ SRX14474277: Cultured cell lines

◢ SRX14474281: Cultured cell lines

◢ SRX2010897: Embryos

◢ SRX6780074: Embryos

◢ SRX645427: Eye-antennal disc

◢ SRX085404: Kc167

◢ SRX085405: Kc167

◢ SRX085406: Kc167

◢ SRX100250: Kc167

◢ SRX100251: Kc167

◣ SRX1021223: Kc167

◢ SRX252226: Kc167

◢ SRX749039: Kc167

◢ SRX749040: Kc167

◢ SRX749041: Kc167

◢ SRX016158: S2

◢ SRX016160: S2

◢ SRX191913: S2

◢ SRX191914: S2

◢ SRX2638363: S2

◢ SRX2638364: S2

◢ SRX027388: White prepupae

◢ CTCF: STRING

dco
Sox100B
Tpst
CG46311
CG32633
Mef2
Cib2
Sox21a
RapGAP1
CG43693
CG34384
sgll
CG31473
CG2993
CG1354
CARPB
sbr
Ama
bcd
CkIIalpha-i3
CG13896
CG13895
Tak1
CG42579
mtSSB
CG6126
CG31287
ush
CG14974
CG10359
CG10357
htk
shop
unc-5
nej
snu
Sid
CG33346
CG15615
Wnt4
CG3358
CG8306
CG5089
CG10481
InR
Prm
Fhos
CG13306
CG12007
wgn
CG34268
phyl
Oaz
Reg-2
CG13893
CG12863
bor
asun
CG7956
CG13280
mdy
Ptpmeg2
CG3106
gol
HisRS
CG6470
Bx
CG6481
Ggt-1
CG43338
nrv2
CG43610
CG17376
CG17377
CG12986
TfAP-2
Aps
Sur-8
CG42824
CG42823
CG42798
CG34280
CG34279
Ldh
otp
CAH15
Pde8
CG44439
CG14760
CG13970
CG33120
CG31752
CG10600
vir-1
CG6405
CG6388
CG5446
Gr89a
Decay
Cad89D
CG43290
nxf4
CG31496
CG32295
Spn
CG31191
Atpalpha
lace
CG13689
Npc2b
CG33226
CG30287
CG30286
CG30283
Syn2
CG31275
galectin
CG11374
RpS28a
Mgat2
Axn
Rubicon
CAH3
Eaat2
shot
DJ-1alpha
Svil
rtv
Lint-1
Dlic
ham
N
mRpS33
CG31279
CG17565
CG14881
upd2
pkaap
crp
CG17329
CG13258
Tsp68C
Hml
CG8757
CG8750
Abd-B
CG10365
nau
CG10232
CG42354
CG42353
mRpL2
Ufd1-like
NaPi-III
FoxK
bark
CG31960
pdgy
eag
CG9030
CG16721
Usp30
Pde1c
CycY
Indy
CG10222
flr
CG5568
CG18586
CG31909
PDZ-GEF
Ubr1
wcy
CG4955
CG4949
velo
dikar
Rrp46
Irp-1B
CG6345
CG12009
Dys
CG15025
RpS11
CG8858
mtd
Tim17b1
piwi
TTLL4A
CG12253
prage
Adar
CHES-1-like
CG15478
lectin-28C
CG14535
TwdlE
Nc73EF
Cpr73D
l(3)mbn
Pif1
Pgant4
CG31776
stg
SP1029
CG45544
stl
CycB
CG9896
ind
CG43680
CG43679
CG43678
CG18581
CG13461
CG12310
BBS4
Obp99d
Obp99b
Dup99B
CG15506
lectin-46Cb
CG1648
lectin-46Ca
CG34033
CG30001
raskol
siz
CG9171
Lasp
Dab
CG43954
RagA-B
CG11970
CAHbeta
PGRP-LA
PGRP-LC
CG13192
out
CG34281
CG14327
CG14326
CG14324
CG14323
Cyp12e1
Lsd-2
CG9065
CG5599
CG33178
CG33177
CG15027
CG4020
CG12236
sced
Dpit47
Adf1
gcm
Mtpalpha
CG31709
fal
Gbs-76A
zip
uzip
SNF4Agamma
Sfp84E
Os-C
CD98hc
CG14762
CG6118
Act88F
Zasp52
CG33465
Myd88
Cpr100A
CG15545
LanB2
CG34260
DNaseII
CG7794
CG7785
abd-A
tbrd-1
TfIIA-S
Pli
for
galla-2
OXA1L
CG6409
Cpr67Fa1
CG14903
CG14891
CG34435
CG34434
CG9220
Fancm
cm
CG4593
CG42308
CG32736
CG3032
par-1
SP555
CG14042
mthl14
E(bx)
CG6142
CG33557
CG2990
RpS7
CecB
CecA2
CecA1
Anp
stc
CG15269
Smyd5
Oga
Nelf-A
CG3337
retm
frj
CG43332
CG1077
Osi1
CG3556
Men
mthl1
SNRPG
RpS19a
Rok
muc
Alp13
scpr-B
scpr-A
CG5214
CG17734
CG32264
RpS21
CG3104
CG2991
CG32461
ftz-f1
CG13690
ebi
AP-2alpha
Cpr76Bc
Cpr76Bb
Cpr76Ba
E(Pc)
Lk
CG42758
CG34039
Pex3
Pdi
CG32147
FucTA
CG7509
CG18808
ome
CG43121
Tlk
Rala
Gp150
NLaz
CG31659
Pop2
Grip163
CG6928
Toll-7
Usp47
DnaJ-1
Tsp
Nhe3
CG11327
slbo
bs
RpS26
CG12617
sm
CG42753
CG43277
CG18367
CG31036
CG15517
CG15515
Rsbp15
Cog1
CG4860
CG17404
CG12256
eIF3d1
GILT3
GILT2
CG18754
CG16710
RpLP2
Cdk4
ball
Lerp
IntS12
His2Av
SPARC
unk
VhaAC39-2
CG13829
HnRNP-K
CG9344
CG9313
CG34115
CG15650
CG15649
CG13962
dnt
CG13086
CG34253
ppl
pzg
CG12974
CG1688
ppk7
ppk14
CG9500
His2A:CG33865
His2A:CG33862
His2A:CG33850
His2A:CG33847
His2A:CG33844
His2A:CG33841
His2A:CG33838
His2A:CG33835
His2A:CG33832
His2A:CG33808
His4:CG33909
His4:CG33905
His4:CG33903
His4:CG33901
His4:CG33889
His4:CG33887
His4:CG33885
His4:CG33883
His4:CG31611
CG42268
Prp31
Msh6
CG7011
CG6878
CG8818
CG8569
CG33632
cpo
Rim
fax
TMS1
GluRS-m
CG3546
CG3527
CG11444
CG11436
His2B:CG33908
His2B:CG33906
His2B:CG33900
His2B:CG33888
His2B:CG33886
His2B:CG33884
His2B:CG33880
His2B:CG33878
His2B:CG33876
His2B:CG33874
His2B:CG33872
His2B:CG33870
His2B:CG33910
His2B:CG33904
His2B:CG33902
His2B:CG33898
His2B:CG33896
His2B:CG33894
His2B:CG33892
His2B:CG33890
His2B:CG33882
Bub1
Bsg25D
dbe
aru
PNUTS
Vha13
Nup58
CG6195
CG31220
CG31219
MED8
CG8929
mRpS18C
CG2218
CG15536
CG15535
CG15533
CG42740
CG2217
Pex7
Arr2
Pez
Cpr
CG10041
CG10038
Sytalpha
Oli
CG6870
nAChRalpha6
Fkbp59
CG4537
CG34183
mthl2
TM9SF3
Eaf6
TotX
fl(2)d
CG6329
CG13339
Ptp61F
312
CG9988
CG10011
mdlc
CG4390
CG17193
eya
Spn28Da
CG7102
Spn28Db
RpLP1
CG13692
CG11885
BBS8
Ent2
CG9596
IFT52
COX5BL
COX5B
Rlip
CG5697
CG2493
tzn
Spc105R
CG3698
mRNA-cap
CG32599
mud
CG34054
CG30026
CG7763
SrpRbeta
CG6511
CG32022
Rich
Ddx1
Csp
CG11523
CG14270
CG10804
CG10803
CG10802
glu
LSm7
ChLD3
BuGZ
shep
beat-IIIc
ver
nst
eIF2beta
Gcn5
chif
CG4455
CG42231
CG9005
Ist1
CG8549
CG3638
CG11403
CG14218
CG14204
CG14219
Mp
cnn
cbs
CG8945
CG4991
CG16700
CG8728
CG34430
CG30380
CG30379
CG34431
tara
Lmpt
RpL37a
Loxl1
CG11334
CG11333
Got1
Wdr62
CG31663
CG15358
Asator
CG42784
Ca-beta
Vm32E
CG12398
fiz
CG14406
CG9512
Eh
CG5213
Chs2
Eglp2
IM18
Eglp3
Eglp1
CG43209
CG42560
CG42559
CG10332
PK1-R
CG9920
CCHa1
CG6330
CG12853
ADPS
Lap1
caps
jp
brwl
CG46468
CG5504
Sesn
CG46429
Alg3
mus304
RpIIIC53
CG7341
CG32195
Son
Kap-alpha3
CG9399
CG9396
CG16790
RSG7
Mbs
Diap1
CheB93b
CheB93a
CG7907
CG12926
GstT2
waw
bbx
Sep1
CG42495
CG34458
CG34457
CG10947
CG10949
Arpc2
CG17450
GCS2alpha
His3.3B
fh
Bap111
scyl
SIFaR
Gr98d
Gr98c
Gr98b
alpha-Man-IIb
CG9593
sev
CG7458
dpr20
CG15556
Gycbeta100B
Nrt
CG9018
ACXD
Jafrac1
CG33128
CG31928
CG31926
CG5890
CG5886
CG14545
GlyP
CG4259
CG14423
CG3603
CG17959
pst
Sec63
CTCF
Pdp1
Idh3a
CoRest
Hsp70Ba
CG5608
TyrRII
CG14321
Panx
CG9485
Fs
scb
Sox102F
CG32117
CG12520
Gmap
CG8180
Ufl1
CG1943
CSN3
CG13255
CG11456
RpL37b
CG9876
CG42703
Cp1
CG42806
PheRS-m
St4
CG18568
RhoGEF64C
CG7514
CG18418
CG15876
axo
Ntmt
CG46338
CG30010
Lime
mRpL14
Raf
Rgk3
ASPP
mthl8
CG4822
Nepl18
Nepl17
CG8519
Poc1
CG10171
Cyp318a1
Cyp311a1
psq
goe
Twdlalpha
Pms2
Hk
Pax
RtcB
CG13085
Alp12
Cpr30B
CG17855
CG13113
CG7381
Paip2
CG7091
CG14416
Den1
CG8490
CG34021
CG4597
CG9304
CG34029
CG13465
BobA
CG11659
CG11391
CG11407
CG6300
rols
pan
tow
l(1)G0320
RpS28b
CG32700
UGP
Pdxk
CG32040
CG32039
CG44837
chas
Spn77Ba
Spn77Bb
aft
fab1
CG33981
bin
RhoGAP100F
Rift
FeCH
Adgf-E
CG34205
a
CG11269
kug
Tom20
Gabat
CG7668
lectin-37Db
lectin-37Da
Lectin-galC1
east
PIG-K
CG5674
CG6123
CG6106
tun
CG8249
CG12970
can
Or67d
His3:CG33830
His3:CG33827
His3:CG33824
His3:CG33821
His3:CG33818
CG30076
inv
CG12061
2mit
CG4293
Appl
His1:CG33813
His1:CG31617
His1:CG33864
His1:CG33849
His1:CG33846
His1:CG33843
His1:CG33840
His1:CG33837
His1:CG33804
bun
rdgC
asl
CG43206
beta3GalTII
Gle1
Vps25
rswl
Prp19
CG5189
CG30120
CG43271
ND-75
CG1632
mRpL55
cdi
CG6040
ATPsynD
CG14947
alpha-Man-Ia
Gip
CG2909
CG43740
CG15306
Nepl16
CG34027
nmdyn-D6
mRpS25
CG14414
Hsp70Bbb
CG3092
Gpdh1
CG9044
pk
CG30384
CG42814
CG42813
sky
RPA2
Mtp
CG9272
CG43739
CG11873
His1:CG33816
Sfp36F
CG5790
CG43362
ZnT77C
ND-39
CG32425
CG18281
fred
CG15040
tna
CG32816
CG3777
CG1421
CG1428
kl-5
fz4
scramb1
Pcf11
Cyp6a23
Cyp6a22
Cyp6a17
Vsx2
wdp
CG5819
Spn75F
CG14459
Eo
CG9503
Patj
dlt
alpha-Spec
Cdc37
CG12020
lz
c11.1
CG7276
CG7275
CG13455
CG12355
elgi
Pka-C3
GXIVsPLA2
CG17032
CG12531
meso18E
Edg84A
Ccp84Ag
CG34313
CG32832
CG31743
sgg
CG7924
CG34244
CG7906
prd
CG13699
Snp
CG13501
CG13500
CG43066
CG13293
Nha2
CG5897
lbm
Tsp42El
Tsp42En
DCX-EMAP
Sprn
CG5906
Gug
CG6983
CG2111
CG31099
CG31087
CG10559
CG10550
SCAP
CG14591
Tbce
Gpa2
Rh5
Hacd1
Nfs1
CG18787
Nuak1
CG13907
Usp10
ect
mIF2
Ppn
Eip63E
CG9782
CG43778
Tsp96F
swi2
SP1173
CG42680
Naprt
SLO2
CG8188
CG43867
CG3713
CG14635
vas
solo
TfIIS
ck
CG33679
Crys
Or33c
Or33b
Thor
RpI135
CG4213
Cyp6a18
Calx
CG43446