ChIP-Atlas: Target genes

Potential target genes for HDAC2

Query protein: HDAC2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX11399801 | NCI-H1963
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC2's Target genes

◢ HDAC2: Average

◢ SRX16386913: 293

◢ SRX3010110: A549

◢ SRX3010111: A549

◢ SRX24188777: BJ

◢ SRX24188786: BJ

◢ SRX20550182: BT67

◢ SRX20550183: BT67

◢ SRX20550184: BT67

◢ SRX20599715: Caco-2

◢ SRX20599717: Caco-2

◢ SRX017704: CD4+ T cells

◢ SRX687555: Erythroid progenitors

◢ SRX1053939: ES cells

◢ SRX1053948: ES cells

◢ SRX1053951: ES cells

◢ SRX1053958: ES cells

◢ SRX1053973: ES cells

◢ SRX1053977: ES cells

◢ SRX10616096: GM12878

◢ SRX10616097: GM12878

◢ SRX11374678: GM12878

◢ SRX11374679: GM12878

◢ SRX3322296: GM12878

◢ SRX3322297: GM12878

◢ SRX4909431: HCC3153

◢ SRX4909432: HCC3153

◢ SRX100538: Hep G2

◢ SRX10478224: Hep G2

◢ SRX10478225: Hep G2

◢ SRX2423815: Hep G2

◢ SRX2423816: Hep G2

◢ SRX100390: hESC H1

◢ SRX116457: hESC H1

◢ SRX186668: hESC H1

◢ SRX3694983: HL-60

◢ SRX3694988: HL-60

◢ SRX2023732: iPSC derived cardiac cells

◢ SRX2023764: iPSC derived cardiac cells

◢ SRX1053919: iPS cells

◢ SRX1053924: iPS cells

◢ SRX1053929: iPS cells

◢ SRX1053934: iPS cells

◢ SRX1053963: iPS cells

◢ SRX1053968: iPS cells

◢ SRX1053981: iPS cells

◢ SRX1053986: iPS cells

◢ SRX1053991: iPS cells

◢ SRX1053996: iPS cells

◢ SRX1054001: iPS cells

◢ SRX1054006: iPS cells

◢ SRX100516: K-562

◢ SRX116423: K-562

◢ SRX116424: K-562

◢ SRX186643: K-562

◢ SRX2423402: K-562

◢ SRX2423403: K-562

◢ SRX5457481: K-562

◢ SRX5457482: K-562

◢ SRX7135363: K-562

◢ SRX1514286: Kasumi-1

◢ SRX8064823: Lymphoblastoid cell line

◢ SRX8064824: Lymphoblastoid cell line

◢ SRX190281: MCF-7

◢ SRX2140211: MM.1S

◢ SRX11399800: NCI-H1963

◣ SRX11399801: NCI-H1963

◢ SRX11399802: NCI-H1963

◢ SRX9779520: NCI-H1963

◢ SRX4732741: Pre-B cells

◢ SRX7981741: Prostate cancer

◢ SRX7981742: Prostate cancer

◢ SRX7981743: Prostate cancer

◢ SRX7981744: Prostate cancer

◢ SRX4313202: RH-4

◢ SRX4313219: RH-4

◢ SRX4313220: RH-4

◢ SRX9562892: RH-4

◢ SRX9562897: RH-4

◢ SRX19212560: SK-N-MC

◢ SRX7643943: U-87 MG

◢ SRX059711: VCaP

◢ SRX059712: VCaP

◢ HDAC2: STRING

MTRNR2L1
ZMPSTE24
PPT1
MBIP
ZNF684
RLF
CAP1
PPIE
TRIT1
EXO5
MAMDC2
SKA1
MYCL
UTP20
UTP25
PF4
PPBP
NT5C1A
POLR3D
HPCAL4
BIRC5
DUX4
CDK7
ACVR1
RABL2B
HEXA
MFSD2A
NUF2
EXO1
RTTN
TRMT1
NACC1
SEMA3C
MRPL45
ZP4
NKX2-8
IQGAP3
WDR7
RRP15
CRNKL1
CFAP61
TIMM21
FBXO15
GCNT2
GBA
BROX
AIDA
ARHGEF2
NTAQ1
CCDC102B
TMX3
DHX37
BRI3BP
SPACA1
PHB2
TMEM241
PPP1R3B
NKX2-1
SLC12A5
LRRC29
SPATA25
NEURL2
CTSA
QTRT1
FAM72C
FAM72D
ACTR6
FAM72A
INO80C
PMAIP1
COMMD6
UCHL3
METTL11B
URB1
RPH3A
ST8SIA5
AURKB
NPC1
METTL1
EEF1AKMT3
CYP27B1
GRWD1
ADH7
DIMT1
TRAPPC6A
BLOC1S3
FRG2C
DPH1
RTN4RL1
C16orf71
ANKS3
CCNB1
BUB1B
OSBPL1A
DMAC1
RPS3A
C12orf66
AP1B1
UNG
ALKBH2
PNO1
KPNA2
CYP21A2
LAMP1
SASS6
MRPS33
DHDDS
CCT2
TRMT61A
TSACC
CCT3
DIAPH3
MARCHF7
TBC1D4
RBM19
FANCI
TTC27
TXNL4A
RBFA
SECISBP2
TTI1
RPRD1B
NUP35
THADA
MEA1
WDR74
GPATCH4
ZNF778
PTPRD
CCDC86
BAG6
APOM
PUM3
MRPL27
EME1
SLF2
TOM1
AEN
CDC16
RNF125
NCAPH
TFB2M
CNST
ING5
KIF2C
PBK
PAX9
POU2F1
ENDOV
GTPBP4
TIMM9
KIAA0586
ZFPL1
CDCA5
TMEM262
ZNF24
BOLA2
SLX1B
SLX1A
BOLA2B
FBXO5
SULT1A4
SULT1A3
NBPF1
CLSPN
ADAT1
ATP6V0D1
AGRP
ESCO1
USP32
VPS41
ITGB3BP
EFCAB7
DDX42
CCDC47
KIF14
PSEN2
CHEK1
ASPM
LMO2
SLAMF8
METAP1D
MAK16
RRP12
EDC3
TAF13
AIP
TDG
CCNA2
NOL6
TCF4
CCNB2
MRPS36
TAF1A
BMP8B
PLEKHD1
SSR2
NASP
ZNF276
VPS9D1
AP2S1
OBI1
PSME3
NBN
CCDC15
FBXW2
PAXBP1
SLC35D1
ACYP1
ZC2HC1C
HEATR1
CEP135
AP1S1
KAT5
OGDH
CFAP53
TMEM186
PMM2
RBKS
BABAM2
BLM
PTRH2
VMP1
ANKRD29
WWP2
SOCS6
DZIP3
CIP2A
TEKT2
ADPRS
DHX33
SUGP2
ARMC6
POLR2M
DNMT3B
HSPA12A
ENO4
ZNF148
HAT1
CNDP2
TTK
RUVBL1
MXD1
SNRPD2
QPCTL
ZBTB37
CKAP2L
DDX19A
RANGAP1
NUDCD1
H2BW2
FAM72B
CENPH
MAGI1
HEG1
EIF2B3
ABCF1
STAP2
GAR1
MPND
PHB
RBBP8
MAB21L2
RIOK3
RAD51
GMNN
LIG4
ABHD13
HDHD2
RFC5
TRMO
FH
LSM14B
PPP1R12B
MRRF
FBXO28
FAM234B
COMMD4
C6orf89
TOP3A
SMCR8
MOK
UQCRC2
TXLNA
PUS1
ATP5F1A
TMEM248
VPS33A
MIS18A
NR6A1
SHC1
CKS1B
CNPY3
TRAPPC8
CDCA3
SP4
NAGPA
SSBP1
ACYP2
YIPF3
POLR1C
RPUSD4
FAM118B
USP44
SPNS1
PMS2
AIMP2
ZSCAN25
ZFAND2A
INO80
CASP7
RASL11B
CCNG2
PIGU
SMC2
IFNG
TRIP4
DDX10
DEPDC1
WDR26
ISG20
PSMD7
COL9A2
DPY19L4
ACOX3
RPIA
CENPN
RMC1
PHF21A
NRL
DCAF11
HSCB
SRD5A1
NSUN2
CHEK2
MLN
IBA57
MTFR2
CARS2
ZNF23
CENPBD1
TFAP2A
UBFD1
EARS2
ZGRF1
LARP7
PRCP
DDIAS
PCNP
VPS26B
NCAPD3
PDCD2L
RPS19
SNRPE
ASNS
URB2
TAF5L
NAP1L4
DTNA
CWC25
PTPN4
KLHL12
FAM183A
ZBTB49
LYAR
CHAC1
SLC25A17
CRISPLD1
SCFD2
USP30
VPS35
PELP1
DIS3
DCUN1D2
BOLA2-SMG1P6
NAGK
NLE1
RNF115
POLR3C
NARS1
SLC38A7
GTF3C4
DDX31
SLC49A4
HSPBAP1
SZT2
MED8
TMCO1
CABYR
DMRT3
CCDC115
IMP4
XPO5
POLH
RNF40
CCDC189
SHCBP1
C18orf25
RPS29
RFC1
MVK
POLD3
ARMC2
PEX19
TAF4B
CLIC3
MMS22L
GNPAT
C1orf131
RTRAF
NTM
EPYC
ATP4B
NOL8
CENPP
KLF1
GCDH
PFKM
ZNF408
ARHGAP1
COQ10B
SRCAP
LOC730183
CTRL
PSMB10
PLSCR4
KLHL18
KIF9
C16orf46
FAM200B
TK1
AFMID
NIP7
COG8
UBAP1L
RANGRF
TMEM242
ATR
WDR46
PFDN6
MCRS1
SCRN3
CIR1
POC5
KIF23
RPS8
METTL3
IFT57
MIEF1
COX8C
RETNLB
UFD1
CDC45
POLQ
NDUFAF6
CCNE2
FAM136A
CCDC39
CRELD2
ALG12
KIF18B
SWSAP1
KCTD9
CDCA2
PACRGL
KDM7A
TASOR2
EPHB1
ADAM17
LAP3
RRM2
S100A13
VPS11
CHTOP
SLC39A6
ELP2
TTC23L
PIGW
MYO19
PIPOX
GATB
WDR4
PMVK
PALB2
DCTN5
EEF1AKNMT
ERICH4
DMAC2
RAD9A
ZBTB17
TCTN2
TTC31
CCDC142
MRPL24
WDR61
MRPL42
LUC7L
FKBP1A
RNH1
MRPS21
LRRC61
HASPIN
MTCH1
ACTR3C
UBE2Q1
PPIH
LAMTOR5
PRPF38A
ORC1
RFPL4B
GSN
RAB14
SMYD5
DYNC2I1
LSM5
AVL9
DARS2
CENPL
ZNF331
SRPRB
ARHGEF7
POLR2C
DSE
TSPYL1
SCG5
POLR3H
NAT10
ZNF202
SS18
PIAS3
RNF138
ZNF77
USP35
KCTD21
IPO4
TRMT6
MCM8
NMNAT1
LZIC
ANGPTL6
SMG5
PPAN-P2RY11
PPAN
TMEM79
ZFYVE1
SLF1
KIAA0825
PLK1
ARL14EP
CFDP1
MUL1
LACTB
UBR7
GON7
IVD
RPS27L
AMZ2
ATP6V1C1
SLC35A3
MCM10
ACBD3
TTC7A
MCFD2
GTSE1
TWNK
MRPL43
ZNF549
NOL10
FBXW8
DHODH
VPS4B
EPHX1
MOB3A
IZUMO4
POLA2
NOC3L
STYXL1
MDH2
APRT
ADCK1
SLC38A10
PCID2
CUL4A
NIPSNAP3A
NPHP1
TACR1
WDR62
THAP8
RIOK1
CAGE1
FBXW9
GPAM
SRP54
USP37
E2F3
CNOT9
RPF2
LRIG2
CHUK
MAEA
RPE
MCTS1
KLHL32
IREB2
NDUFAF4
DDX11
WDR3
GDAP2
YAE1
MAPRE2
IFT172
TMEM231
MFSD5
RPGR
LRFN4
MATN3
DNAJC25-GNG10
DNAJC25
DCT
EXOSC3
CDC20
POLI
VAC14
PDE8A
APTX
E2F2
PTCD2
MRPS27
FUCA2
LPP
SERPINB8
DNAJA1
TMEM109
PRMT2
ARHGDIA
TFIP11
POLR2J2
LRRC49
THAP10
MAP3K7CL
ACADM
TXNL4B
DHX38
CKS2
CYB5R1
RAB4A
MTO1
RIC1
TDO2
NME1
RNF166
LTA4H
CTU2
ZSCAN30
KIAA2026
CDC37
SEC11C
IARS2
BPNT1
SPATA33
AP1G1
PIK3C3
C12orf45
IER3IP1
HK2
GPR88
TMEM9
UMAD1
MRPL33
CTH
RAMAC
PRDX6
MRPL15
CIART
ROCK1
ACAA2
TAF6L
CAND1
ICE2
NAP1L1
BNIP2
ZNF540
ZNF571
ENOX2
PLRG1
FANCD2
DPH2
ATP6V0B
RCL1
ERI1
SETD6
PDE4B
CCDC9
HAUS1
LRP2BP
ANKRD37
EPRS1
DNTTIP2
XRCC2
FAM187A
EFTUD2
CCDC103
C18orf21
CEP162
ATP6V1H
CEP126
ANGPTL5
HEATR5B
GPATCH11
UTP14A
WBP2
TEX10
GALE
MBD1
C22orf39
TAPBPL
RDH5
BLOC1S1
ITGA7
DCP1B
CHMP7
TIGD4
ARFIP1
MTHFD1
WASHC5
NSMCE2
KYAT1
LSG1
LYRM4
FARS2
BRCA1
GABPB2
SNAPC5
SPTLC1
C15orf61
PDCD11
ATP5MD
LRRC8A
RSL24D1
DYRK2
PRIM1
POLR3F
DZANK1
POLR1B
ADPGK
SETDB1
SLC25A32
DCAF13
DST
TMEM19
TOM1L2
DRC3
RBM7
C11orf71
TROAP
ING4
RPAIN
NUP88
TMCC1
KIFAP3
GOT2
JRKL
CCDC82
SMPD3
PRLHR
SLX4
PHOSPHO2-KLHL23
PHOSPHO2
CCDC173
WDPCP
MDH1
SKA3
MRPL57
PHF19
ZNF696
ZNF497
UTP15
ANKRA2
CEP43
ALG9
CHRNA9
MFSD1
CYRIB
VARS1
NPL
FARSB
MDN1
DLGAP5
TIPIN
MAP3K13
TSNAXIP1
RANBP10
ZNF598
CORO2B
COMMD5
ARHGEF39
LMAN2L
CFAP298-TCP10L
CFAP298
WFDC3
DNTTIP1
EIF3C
EIF3CL
SYPL1
PTK2
TBC1D15
UBN2
SCAMP3
FAN1
NRAS
RASAL2
MBD2
CCDC113
SIPA1L2
PSENEN
LIN37
RGS16
ZCWPW1
MEPCE
INTS7
DTL
RTEL1
STMN3
RPA2
KNTC1
CIC
TRAPPC4
RPS25
DCLRE1C
GFUS
RPGRIP1L
FTO
HNRNPU
YRDC
C1orf122
UTP3
ZKSCAN8
VPS37C
DYRK1B
MRM1
H3C15
H3C14
H2AC19
H2AC18
HSP90B1
STPG3
NELFB
PICK1
KDM4C
KIAA0319
MELK
ESRP1
NDUFB3
FAM126B
MTHFD1L
PPIL4
WDR53
FBXO45
PPM1H
CNPY2
RANBP6
STMP1
GPR37L1
BUB1
C12orf43
UBAP2
SLC30A1
BLOC1S2
PIAS4
BAG4
LSM1
EFNA5
MTAP
DAND5
TFDP1
IGBP1
PCP4
GTF3C3
GTF2H3
EIF2B1
EBNA1BP2
CFAP57
MRPL30
MITD1
XRN2
PRR3
GNL1
CDC25A
DHX16
STOML2
MSTO1
NME7
BLZF1
SDCCAG8
CEP170
PIF1
POLL
DPCD
ZNF219
HNRNPH2
GLA
CIAO2B
CES2
COX19
LIPG
TIMM17A
CRKL
TOP3B
PMF1-BGLAP
PMF1
CZIB
MRTO4
EMC1
HAX1
BIRC6
SFXN2
ARL3
TMEM198
CHPF
NUDT5
CDC123
LOC390877
GTF2F1
ITPA
DDRGK1
TMEM234
EIF3I
ALG8
JUP
TTPAL
MYO9B
HAUS8
RAI14
ZFP90
YARS1
S100PBP
KIAA0895
LSM12
G6PC3
CDC25B
DUS2
DDX28
GRN
ANLN
SERP1
EIF2A
DDX19B
SETD4
POLR1F
KNOP1
MTMR2
B3GAT3
DNMT1
SMG1
SMAD2
IPO9
AP1S3
STAP1
SLC10A2
KNL1
NEK2
SLC12A9
AAR2
LRRC59
SLC24A1
VPS45
BLOC1S5
INTS9
HMBOX1
PIN1
OSGEP
APEX1
JAK2
KLHDC4
LINGO1
EXOSC6
RASGRP3
EIF6
CENPE
STRA6
MAK
EFCAB6
SH3GL2
TATDN3
NSL1
RBBP5
USP2
RABGEF1
GFM1
MTR
GTF2H2C_2
GTF2H2C
ARFGAP2
RPUSD2
CCDC32
SNRPG
PCCA
NDUFAF2
ERCC8
COQ5