ChIP-Atlas: Target genes

Potential target genes for HDAC2

Query protein: HDAC2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX11399800 | NCI-H1963
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC2's Target genes

◢ HDAC2: Average

◢ SRX16386913: 293

◢ SRX3010110: A549

◢ SRX3010111: A549

◢ SRX24188777: BJ

◢ SRX24188786: BJ

◢ SRX20550182: BT67

◢ SRX20550183: BT67

◢ SRX20550184: BT67

◢ SRX20599715: Caco-2

◢ SRX20599717: Caco-2

◢ SRX017704: CD4+ T cells

◢ SRX687555: Erythroid progenitors

◢ SRX1053939: ES cells

◢ SRX1053948: ES cells

◢ SRX1053951: ES cells

◢ SRX1053958: ES cells

◢ SRX1053973: ES cells

◢ SRX1053977: ES cells

◢ SRX10616096: GM12878

◢ SRX10616097: GM12878

◢ SRX11374678: GM12878

◢ SRX11374679: GM12878

◢ SRX3322296: GM12878

◢ SRX3322297: GM12878

◢ SRX4909431: HCC3153

◢ SRX4909432: HCC3153

◢ SRX100538: Hep G2

◢ SRX10478224: Hep G2

◢ SRX10478225: Hep G2

◢ SRX2423815: Hep G2

◢ SRX2423816: Hep G2

◢ SRX100390: hESC H1

◢ SRX116457: hESC H1

◢ SRX186668: hESC H1

◢ SRX3694983: HL-60

◢ SRX3694988: HL-60

◢ SRX2023732: iPSC derived cardiac cells

◢ SRX2023764: iPSC derived cardiac cells

◢ SRX1053919: iPS cells

◢ SRX1053924: iPS cells

◢ SRX1053929: iPS cells

◢ SRX1053934: iPS cells

◢ SRX1053963: iPS cells

◢ SRX1053968: iPS cells

◢ SRX1053981: iPS cells

◢ SRX1053986: iPS cells

◢ SRX1053991: iPS cells

◢ SRX1053996: iPS cells

◢ SRX1054001: iPS cells

◢ SRX1054006: iPS cells

◢ SRX100516: K-562

◢ SRX116423: K-562

◢ SRX116424: K-562

◢ SRX186643: K-562

◢ SRX2423402: K-562

◢ SRX2423403: K-562

◢ SRX5457481: K-562

◢ SRX5457482: K-562

◢ SRX7135363: K-562

◢ SRX1514286: Kasumi-1

◢ SRX8064823: Lymphoblastoid cell line

◢ SRX8064824: Lymphoblastoid cell line

◢ SRX190281: MCF-7

◢ SRX2140211: MM.1S

◣ SRX11399800: NCI-H1963

◢ SRX11399801: NCI-H1963

◢ SRX11399802: NCI-H1963

◢ SRX9779520: NCI-H1963

◢ SRX4732741: Pre-B cells

◢ SRX7981741: Prostate cancer

◢ SRX7981742: Prostate cancer

◢ SRX7981743: Prostate cancer

◢ SRX7981744: Prostate cancer

◢ SRX4313202: RH-4

◢ SRX4313219: RH-4

◢ SRX4313220: RH-4

◢ SRX9562892: RH-4

◢ SRX9562897: RH-4

◢ SRX19212560: SK-N-MC

◢ SRX7643943: U-87 MG

◢ SRX059711: VCaP

◢ SRX059712: VCaP

◢ HDAC2: STRING

MTRNR2L1
PPT1
ZMPSTE24
ZNF684
CAP1
MBIP
SKA1
PPIE
TRIT1
EXO5
UTP20
RPH3A
RLF
ARHGEF2
MRPL45
RPS29
RABL2B
HPCAL4
TRMT1
NACC1
IQGAP3
NT5C1A
CDK7
MYCL
SHCBP1
SSH2
CRNKL1
CFAP61
RAD51
QTRT1
NUF2
PF4
PPBP
GCNT2
MFSD2A
TRAPPC6A
BLOC1S3
DHX37
BRI3BP
POLR3D
NCAPH
UTP25
C12orf66
DIAPH3
BMP8B
WDR7
ATP6V0D1
AGRP
NBN
MOK
FAM72C
FAM72A
ADAT1
ZP4
PSME3
GRWD1
PAX9
RTTN
MTFR2
HSPA12A
ENO4
SEMA3C
SPACA1
PMAIP1
LAMP1
TRMT61A
MAB21L2
RRP15
COX8C
C16orf71
ANKS3
HEATR1
BIRC5
DZIP3
CIP2A
GPATCH4
WDR74
ZNF24
WDR4
AP1S1
PUM3
NBPF1
FAM72D
TIMM21
FBXO15
SLF2
ATP5F1A
HAUS1
FRG2C
SPATA25
NEURL2
CTSA
CORO2A
CDC20
CFAP299
BLM
METAP1D
CCDC102B
TMX3
EXO1
ACVR1
PHB2
FANCI
RIOK3
CDC16
ZCCHC7
SRCAP
LOC730183
FBXO5
UFD1
CDC45
KIF23
RBKS
BABAM2
URB1
SCFD2
KPNA2
UNG
ALKBH2
ZGRF1
LARP7
KIF2C
LYPLAL1
SMYD5
PNO1
COMMD6
DPH1
RTN4RL1
UCHL3
UTP4
DERPC
CHTF8
METTL11B
TMEM241
AURKB
MOCS2
MIS18A
TICRR
DUX4
APRT
DMAC1
KATNAL2
MAGI1
TTK
WWP2
LYRM4
FARS2
PLEKHD1
RBM19
EDC3
FAM200B
AEN
IFNG
GTF3C4
DDX31
CKAP2L
TRAPPC8
NOL6
VPS4B
BOLA2
SLX1B
SLX1A
BOLA2B
BOLA2-SMG1P6
SULT1A4
SULT1A3
HDHD2
METTL1
EEF1AKMT3
CYP27B1
TOM1
WDR26
ZNF77
POU2F1
NEK2
TTC27
CD46
TFB2M
CNST
CCT2
NPC1
SLC25A17
CENPS-CORT
CENPS
CFAP53
CCNA2
PRR3
GNL1
FBXW9
MZT1
BORA
RPRD1A
PRLHR
ARMC2
COMMD4
TAF13
AIP
NUDT2
KIF24
RBBP8
CKS2
CYP21A2
RNF125
USP37
CNOT9
CCNG2
TMEM186
PMM2
TRAPPC2L
GALNS
ATL3
LRRC49
THAP10
NKX2-1
CEP135
MRPL1
VPS33A
COL9A2
DSEL
HEXA
RDH5
BLOC1S1
ITGA7
MYDGF
IKBKB
USP2
KIAA0895
ANLN
TAF4B
MRPL11
PPP1R3B
GBA
FAAP24
CEP89
KAT5
PIK3C3
GUSB
TIMELESS
PPP1R10
MRPS18B
KIF22
AP1B1
STAM2
MRPS33
MCM10
TBC1D4
MRM3
GLOD4
CCDC86
RPS3A
WASHC5
NSMCE2
DDX5
CEP95
PEX19
SLC35D1
RETNLB
NTAQ1
CLSPN
STK36
RNF25
CYB5R1
PCCA
ZNF558
MCRS1
TFAP2A
VPS41
ZNF408
ARHGAP1
CYB5R4
TIMM9
KIAA0586
TROAP
E2F3
BCAS3
FAM183A
FAM72B
CCNB1
SLC38A8
SH3KBP1
RNF138
PMVK
PMS2
AIMP2
POLR1B
DPH2
ATP6V0B
WDR61
CRISPLD1
ADPGK
SLC39A6
ELP2
LRATD2
CDK18
DCUN1D2
SLC12A9
CLK3
ZNF778
RBL2
ZFPL1
CDCA5
TMEM262
H1-2
TOMM70
LNP1
NKX2-8
C16orf46
NAT10
POLR2J2
ADSL
HNRNPU
LETMD1
QTRT2
CCDC191
CCDC25
ESCO2
POLQ
SUGP2
ARMC6
RFX5
VPS26B
NCAPD3
RFWD3
HUS1
NME7
BLZF1
RPS27L
DDX19A
INTS9
HMBOX1
RMC1
TRIP4
METTL18
C1orf112
PTPRD
MRPL27
EME1
SHC1
CKS1B
PDP2
CLYBL
C6orf89
HROB
SPG7
SECISBP2
STK11IP
TBC1D16
CCDC40
PBK
MAK16
SMC2
MBD1
MTRNR2L2
MSH3
DHFR
TAF6L
NOL10
NOC3L
PTPN4
SFXN2
ARL3
CENPH
CDC25B
VPS11
KIAA0513
CLN5
SPG21
DHODH
ING5
HSPBP1
BRSK1
WDR3
GDAP2
UPF3A
DIS3
TDO2
RPTOR
KIF18B
TCF4
RPUSD4
FAM118B
CCDC146
DLGAP5
ARL13B
ZBTB37
TAF1A
USP35
KCTD21
TFIP11
FAM161B
COQ6
ASPM
EBNA1BP2
CFAP57
WDR18
GLE1
NOB1
VTI1B
DIRAS2
DCUN1D1
GPX4
MYBBP1A
PDE4B
CHRNA9
EFCAB6
PSEN2
ERCC5
PIF1
LEMD3
DDHD1
RNF187
PSMD9
HPD
NUP35
SPNS1
MCOLN1
PWP1
ZNF594
GEMIN6
CCDC39
KNL1
SF3A3
SGO2
MRPS28
THADA
STAP2
MPND
HASPIN
ZNF598
PIPOX
F11R
SCRN3
CIR1
TXNL4B
DHX38
UQCRC2
RCL1
ESPL1
COMMD5
RPL17-C18orf32
RPL17
C18orf32
MFSD1
IPO11
FKBP1A
RPUSD2
CCDC32
KIF14
UTP11
TBC1D30
RPP40
PACRGL
GNS
CENPN
CRYBG3
LHFPL1
RFC1
PPIH
RIOK1
CAGE1
PRPF38A
ORC1
GAR1
ALKBH8
GTSE1
PPIB
CXXC1
SASS6
POLN
HAUS3
PISD
CASP7
CALHM4
DHX40
RRP12
LACTB
ERCC3
RASL11B
ARID3B
MTR
MRPL24
TTC23L
TM9SF1
TAF1C
ADAD2
CNDP2
BCL9
RGS8
GNB3
TXLNA
LRRC29
VAC14
DYRK1B
KLHDC4
DYRK3
IER3IP1
TEKT2
ADPRS
WDPCP
PRCP
DDIAS
MDH1
STYXL1
MDH2
SMG5
TMEM79
ISG20
NOP9
DHRS1
TSACC
CCT3
MND1
SP4
ZNF396
TSTD1
DHDDS
TRUB2
COQ4
SPCS1
GLT8D1
ZSCAN30
SRD5A1
NSUN2
SWSAP1
RRS1
ADHFE1
TOP3A
SMCR8
CHST12
YIPF3
POLR1C
TWNK
MRPL43
GCSH
SMAD2
PIGU
POP7
ACADM
MELK
DGKB
MCM5
IREB2
PDE11A
RNF166
SCNM1
LYSMD1
CTU2
RPF2
ZNF202
COQ9
CIAPIN1
SPATA4
SLC35A4
APBB3
NYAP1
RANBP6
TRAF5
GATB
CNPY3
CARS2
NPL
PDE8A
AP2S1
ANAPC7
WDHD1
SOCS4
ARFGAP2
NEMP1
MAP11
CEP295
SSR2
ZNF587
GRAMD2A
LRRN3
PCNT
C21orf58
TMEM9B
CCNB2
RNH1
ENOX2
SNRPA
C19orf54
PDCD2L
EHMT1
IPO4
TTF2
CDIP1
RNF40
CCDC189
MED20
BYSL
MDN1
MAPRE2
UBE2C
ATP6V0A1
NUP107
WDR46
PFDN6
FAM98B
LMNA
DIMT1
MEX3A
TMEM260
SENP7
CRELD2
ALG12
GALNT1
TRMT6
MCM8
NIP7
COG8
INPP5K
BAZ1B
FAM234B
POLR2J3
NSFL1C
INO80
PIK3CA
RSPH14
RAB36
DAD1
SOCS3
ST8SIA3
WDR62
THAP8
DNMT3B
TMEM234
EIF3I
DPP4
SLC14A1
KXD1
E2F6
ACOX3
FBXW8
SLF1
KIAA0825
TMED5
CCDC18
PRIM2
ABHD3
ZSCAN29
TUBGCP4
SCG5
GPATCH3
XRN2
ATF3
FBXO43
POLR2K
PIGO
GFUS
PPP1R14D
SF3B4
PARP9
DTX3L
ZNF276
VPS9D1
UBE2Q1
EIF3C
EIF3CL
SLC7A6OS
PRMT7
FCF1
AREL1
MRPL12
NCKAP5L
DTX2
SNX19
EXOSC5
BCKDHA
ACTR6
SERP1
EIF2A
RSPH3
SZT2
MED8
CFDP1
DOLPP1
ORC2
NUDT1
MRM2
SMYD3
RCCD1
ACYP1
PFDN2
NIT1
ZC2HC1C
VPS35
SLC35A3
SDE2
KIZ
ZWILCH
RPL4
OLFM3
LRP2BP
ANKRD37
INO80C
C18orf21
SLC35B2
SCAMP3
GINS3
DENR
ARL2BP
CEP128
GOLPH3L
RAVER1
NAGPA
CDK5RAP3
CEP162
MRM1
NCAPH2
LMF2
TPGS2
BAG4
CHAC1
LSM1
FBL
GPR107
PHLPP2
S100A13
CHTOP
GNL2
ZNF33A
BRCA1
EIF3D
TTC5
PDF
RTF1
POLD1
TMEM178A
BAG6
APOM
PPIL1
TK1
AFMID
PCID2
CUL4A
SF3A1
CCDC157
SLC38A7
RASAL2
RIT1
HEG1
MLN
IBA57
COMMD9
VPS45
COG2
GPN1
CCDC121
VPS72
PPP1R12B
EIF2AK1
WDR5B
PTCD2
MRPS27
PYGO2
LOC101928120
ZNF721
PIGG
NUDT9
DDX19B
CEP126
MUL1
ANGPTL5
DYNLL1
PLK4
TIGD4
ARFIP1
HNRNPH2
GLA
DNAH14
MVD
BCL7A
SPATA2
DPY19L4
LTV1
PLS1
ZNF473
VRK3
PTRHD1
CENPO
MTHFR
CLCN6
TTI1
RPRD1B
RBM7
C11orf71
DBF4B
EXOC1
SMIM5
SPATA33
ASH1L
ZCCHC14
PPIL3
NIF3L1
NOLC1
OGDH
GTF2H3
EIF2B1
DUS2
DDX28
EXOSC3
GINS1
USP36
ABCA3
CFAP206
SPAG1
KLHL20
KLF1
GCDH
EIF2B3
MRPS18C
HELQ
NASP
POLD3
CYB5A
THAP5
DNAJB9
ZZEF1
CYB5D2
ASB8
PSMB4
LAP3
NCOA7
STAT1
SRP54
TIPRL
NOM1
TTC39C
PIGW
MYO19
VPS8
CEP43
FUBP3
LMAN1
EPYC
NAGK
RECQL
GOLT1B
URB2
TAF5L
RAB5B
SMC4
IFT80
SNAP47
JMJD4
HJURP
POLA2
EIF4A1
TK2
CKLF-CMTM1
CKLF
MED25
FUZ
MCF2L
ZNF701
CFAP54
ADAR
DHX33
BUB1B
TXNL4A
SPTY2D1
IQCG
RBFA
SLC25A44
IGSF9
LMLN
ZBBX
TMEM147
LAMA3
RAB23
LTN1
AAAS
STOML2
COA3
CNTD1
TIPIN
MXD3
ARIH1
FKBP3
FANCM
KLC2
RHNO1
FOXM1
MAGEA2B
MAGEA2
ZCWPW1
MEPCE
CENPF
TTLL9
CNPY2
LRRC57
HAUS2
ZNF507
IPO9
NF2
KLF5
SERPINB4
ANGPTL6
PPAN-P2RY11
PPAN
TONSL
ZNF669
COX19
P2RY11
METTL25
CCDC59
WBP1
INO80B
CDC73
NOC4L
DDX51
SETD4
PRRT1
PPT2
KMT2D
MAD2L1
CCZ1B
NDFIP2
CENPA
ZBTB7C
GRHL3
EHD3
CAPN14
NUP214
EIF2D
NEIL3
SHOX2
RSRC1
RBL1
NDUFB3
FAM126B
SAXO2
EFL1
CDC6
CHCHD3
XPO5
POLH
PARPBP
NUP37
MRI1
MEA1
IFT57
HYKK
CIART
JAM3
ARMCX5-GPRASP2
ARMCX5
LY75-CD302
LY75
BOLA1
LAGE3
CBWD5
CBWD3
NDUFAF5
ESF1
CBWD6
TMEM41A
C2orf42
RANGAP1
L3HYPDH
JKAMP
CWF19L1
SNRPD2
QPCTL
TEPSIN
NDUFAF8
OXR1
E2F2
AIFM1
ZNF319
USB1
EML5
POLR3H
CALR
FARSA
MIA3
VPS26C
BRAP
ACAD10
SLC35C2
DPH5
EDC4
MRE11
ANKRD49
PIMREG
VPS53
TMEM231
BLOC1S2
POLR2C
FBXO25
BLMH
USP21
ACAA2
ECSIT
EEF1AKNMT
CDT1
KCTD9
CDCA2
AKR1A1