ChIP-Atlas: Target genes

Potential target genes for HDAC2

Query protein: HDAC2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX11374678 | GM12878
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC2's Target genes

◢ HDAC2: Average

◢ SRX16386913: 293

◢ SRX3010110: A549

◢ SRX3010111: A549

◢ SRX24188777: BJ

◢ SRX24188786: BJ

◢ SRX20550182: BT67

◢ SRX20550183: BT67

◢ SRX20550184: BT67

◢ SRX20599715: Caco-2

◢ SRX20599717: Caco-2

◢ SRX017704: CD4+ T cells

◢ SRX687555: Erythroid progenitors

◢ SRX1053939: ES cells

◢ SRX1053948: ES cells

◢ SRX1053951: ES cells

◢ SRX1053958: ES cells

◢ SRX1053973: ES cells

◢ SRX1053977: ES cells

◢ SRX10616096: GM12878

◢ SRX10616097: GM12878

◣ SRX11374678: GM12878

◢ SRX11374679: GM12878

◢ SRX3322296: GM12878

◢ SRX3322297: GM12878

◢ SRX4909431: HCC3153

◢ SRX4909432: HCC3153

◢ SRX100538: Hep G2

◢ SRX10478224: Hep G2

◢ SRX10478225: Hep G2

◢ SRX2423815: Hep G2

◢ SRX2423816: Hep G2

◢ SRX100390: hESC H1

◢ SRX116457: hESC H1

◢ SRX186668: hESC H1

◢ SRX3694983: HL-60

◢ SRX3694988: HL-60

◢ SRX2023732: iPSC derived cardiac cells

◢ SRX2023764: iPSC derived cardiac cells

◢ SRX1053919: iPS cells

◢ SRX1053924: iPS cells

◢ SRX1053929: iPS cells

◢ SRX1053934: iPS cells

◢ SRX1053963: iPS cells

◢ SRX1053968: iPS cells

◢ SRX1053981: iPS cells

◢ SRX1053986: iPS cells

◢ SRX1053991: iPS cells

◢ SRX1053996: iPS cells

◢ SRX1054001: iPS cells

◢ SRX1054006: iPS cells

◢ SRX100516: K-562

◢ SRX116423: K-562

◢ SRX116424: K-562

◢ SRX186643: K-562

◢ SRX2423402: K-562

◢ SRX2423403: K-562

◢ SRX5457481: K-562

◢ SRX5457482: K-562

◢ SRX7135363: K-562

◢ SRX1514286: Kasumi-1

◢ SRX8064823: Lymphoblastoid cell line

◢ SRX8064824: Lymphoblastoid cell line

◢ SRX190281: MCF-7

◢ SRX2140211: MM.1S

◢ SRX11399800: NCI-H1963

◢ SRX11399801: NCI-H1963

◢ SRX11399802: NCI-H1963

◢ SRX9779520: NCI-H1963

◢ SRX4732741: Pre-B cells

◢ SRX7981741: Prostate cancer

◢ SRX7981742: Prostate cancer

◢ SRX7981743: Prostate cancer

◢ SRX7981744: Prostate cancer

◢ SRX4313202: RH-4

◢ SRX4313219: RH-4

◢ SRX4313220: RH-4

◢ SRX9562892: RH-4

◢ SRX9562897: RH-4

◢ SRX19212560: SK-N-MC

◢ SRX7643943: U-87 MG

◢ SRX059711: VCaP

◢ SRX059712: VCaP

◢ HDAC2: STRING

GSTA4
BORCS6
FRG2C
H4C8
METTL26
MCRIP2
CCDC107
LAMP1
FBXO31
RAB11A
HSPA6
NDUFS7
BCAR3
CCDC200
B4GAT1
BRMS1
LASP1
DNAJB4
RNASE4
ANG
LUC7L2
FMC1-LUC7L2
FMC1
SACM1L
MYNN
ACTRT3
HES7
ALOXE3
PCGF2
PSMB3
PRMT5
KMT5B
DUX4
ELF1
WBP4
DCT
TRIM7
PPEF1
RS1
PLXDC1
MED16
PSMA3
OR1F1
H2BC5
H1-4
RDH5
BLOC1S1
ITGA7
H2BC21
H2AC21
H2AC20
H1-2
ILF2
TRIM41
TMEM259
CNN2
PLEKHG2
H4C12
VPS33A
H4C11
FCHSD2
H4C3
H1-6
H1-3
POLR3E
H3C13
H2BC18
H3C3
H2BC3
H3C15
H3C14
H2AC19
H2AC18
H3C2
H4C2
H2AC4
ZNF839
H2BC11
H2AC11
H4C1
H3C1
H1-1
WDR74
H4C14
H4C15
KNL1
LTA4H
SMARCC2
PTPN6
C12orf57
HMGN4
C8orf37
DPP9
NCOA7
TIA1
SHF
POLG
C17orf97
RNASET2
H1-5
H3C11
H4C13
MTRNR2L1
FRG2
TRMO
H3C8
H2BC10
SPRTN
EXOC8
ZBTB4
SLC35G6
POLR2A
H2BC8
H2AC8
SRSF7
XRCC5
H2AC16
H4C7
H3C7
H2BC9
RPL12
LRSAM1
WASHC2A
SLCO5A1
SNX16
NBN
POLDIP3
H4C9
ANXA2
HNRNPA2B1
CBX3
H2BC12
H2AC12
TMEM107
ZDHHC5
H4-16
H2AJ
WASF2
GBA
MARCHF8
KCNC3
CCDC115
LBX2
PCGF1
COG6
BCLAF1
CTDP1
HEXA
H2BC4
H2AC6
POLR3B
RPLP0
MICU2
PARP2
SRSF6
HMGA1
UBE2S
DDX3X
PIH1D1
ALDH16A1
TRA2B
SIRT4
H4C5
GTF2A1
H4C6
CBWD5
CBWD3
CBWD6
SNRPB
SMIM11B
SMIM11A
NARF
H3C12
H2BC17
H2AC17
C6orf62
IL4I1
NUP62
ATF5
INO80C
EIF4A3
SNRNP70
CALM1
POLR2J3
TMEM238
RPL28
RPL5
TXN2
H3C10
H2BC13
H2AC13
H2BC14
H2AC14
DNAJC25-GNG10
DNAJC25
CRCP
SECISBP2
POLE4
HDAC4
UBC
H4C4
H2BC6
EXOSC9
MDP1
CHMP4A
H2BC7
H3C4
H2AC7
LIG4
ABHD13
FSCN1
ZSCAN30
SGF29
SRFBP1
GSK3B
H3-3B
FUS
COMMD4
U2AF2
MIS12
DERL2
CASC3
PCIF1
MLH3
FTL
UQCC2
STARD7
CLSPN
POMZP3
PAXBP1
HAGH
FAHD1
COMMD1
CCT4
CBWD1
AARS2
KLF7
LZTR1
ZNF706
DNAJB1
MRPL54
APBA3
ING1
NUDT15
TUBA1B
CTSO
SBNO1
SHCBP1
EIF4A2
CYP4F11
EIF3A
WASHC2C
RPS29
ZNHIT2
TRAF7
H2AX
MRPL49
FAU
TMSB4X
TK2
CKLF-CMTM1
CKLF
KMT2E
EXD1
CHP1
RPP25L
C12orf65
MAT2A
POC5
MRPL17
NCOA5
DHPS
ZNF567
STX10
IER2
SUMF1
CYP20A1
CDKN1A
NAGK
SPAAR
ANKRD26
SLC9A1
S100A13
CHTOP
IFRD1
STAT6
SREK1
SLC3A2
RPP38
CDK11B
CDK11A
CD74
HYLS1
H2BC15
H2AC15
C6orf226
RPS3A
RINT1
USP42
SETX
RCCD1
SRSF3
INTS5
KNTC1
DNAJC9
XRN2
C2CD5
LOC100287896
LIPT2
DEPDC1B
STK35
PNKD
ZBED9
FAM71E1
EMC10
AAMP
STX3
PPP2R3B
PHF23
GABARAP
MCRS1
B2M
ZNF335
DGKH
NAT10
TFRC
ZNF518A
RITA1
DDX54
TSR3
GNPTG
TPCN1
RCE1
IQCD
TECR
BAG6
APOM
DENND6A
GOLM2
POU2F1
ANKRD54
EIF3L
EIF3D
DAD1
CLASRP
NOL10
TCAIM
MAGOHB
LSM4
PTMA
EEF2
PXK
ZNF207
COX18
SUCO
ING5
LEO1
SYCE2
BRD2
PRR30
PREB
XRCC2
ZNFX1
GBE1
EHD1
MTHFD2
SPTAN1
SEH1L
VRK2
FAM133B
BRPF1
H2BU1
H2AW
WDR11
GTF3A
TMEM175
GAK
SPATA25
NEURL2
CTSA
ZNF721
PIGG
CUL7
NPRL3
ZNF720
RIPK1
EXOSC8
ALG5
RPS27
RAB13
RPS9
PSPC1
DAGLB
SLTM
MAP2K7
CALM2
WDR62
THAP8
RBM39
CIPC
EIF3B
WDR5B
ATF4
TBCA
PCNA
EMC4
PPIA
ZNF507
PPP1R12A
ZC3H10
RPL41
SMIM10L1
PRH1-TAS2R14
PRH1
ACAD9
SDCBP2
ZCWPW1
MEPCE
CAP1
NCAPD2
MRPL51
SPRED1
NBEAL2
CCDC12
STS
PUDP
ASF1B
PDE7A
RPL10
TSPOAP1
NASP
CSE1L
PLGRKT
SRSF10
RPF1
VHL
SMARCE1
DUS3L
ERAP1
CLCN7
DENR
CALR
NFYC
LENG8
TIMM13
UBE2M
CHMP2A
PRKRIP1
BLOC1S4
RAD50
CKS2
IGFBP4
SPECC1L
ZAR1L
BRCA2
ZFAT
SRSF5
RPL3
UBE3A
FRG1
MTHFD1
ZNF770
MYPOP
AZIN1
P4HA1
GPR137
ARHGAP35
MTR
NUDCD2
HMMR
MRPL53
CPNE8
MED15
ZFP69B
CLK1
HIF1AN
PTBP3
TANGO6
POLR2B
NOA1
E2F6
UBP1
TUBGCP5
MRPL48
EPM2A
P2RY11
MIS18A
TTI2
SMC1A
RIBC1
GARS1
ARPC1A
VPS26C
CABIN1
DUSP1
PIGW
MYO19
SLC25A28
ALKBH5
HLA-DQA1
KDM8
PLEC
CNOT11
MICOS10-NBL1
MICOS10
UCKL1
LRP2BP
ANKRD37
ARHGDIA
VCP
QTRT2
CCDC191
SAP30BP
RECQL5
AP3B1
YDJC
CCDC116
BRAP
ACAD10
RPS11
ZNF644
TMX1
GPATCH3
TMBIM4
FANCL
NUP214
LANCL2
IFNAR1
CR2
AP1M1
CCNT1
SPPL2A
TIMM21
FBXO15
METAP1D
NPAS4
HTR5A
MTRNR2L2
MSH3
DHFR
GSN
RAB14
XKR7
IQSEC3
TDRD7
MTRNR2L8
CPLX2
ZNF77
CAMTA1
SMIM17
NKX1-1
LIN28A
NBPF1
MAMDC2
ZNF555
INSM2
NUF2
ARID3B
CYB5R4
UTP20
MUC3A
FAM24A
NOTCH2NLC
RRP15
NOTCH2NLB
NOTCH2NLA
NME1
KXD1
CRNKL1
CFAP61
SLC35A4
APBB3
RBM48
PEX1
FANCD2
PDE4DIP
SERPIND1
UTP25
TIPARP
ARCN1
KCTD18
TRMT1
NACC1
ZMPSTE24
NAGPA
RNF187
AHCY
PSMD9
HPD
CRBN
YJU2
KCNH7
PPT1
POLR3H
RAB37
TMEM248
RAB42
IBA57
COPS7B
STX16
HPCA
RBM19
TRIP4
RPS19
DLGAP3
QTRT1
TMEM242
SCFD2
MTFR2
EXO1
SPNS1
SSBP1
USP35
KCTD21
ZCCHC7
TTLL4
DHDDS
TATDN3
NSL1
WASHC5
NSMCE2
CELSR3
BARHL1
EIF2D
ZEB1
RTBDN
UBFD1
EARS2
TMEM120A
USP30
TIGAR
ITGB3BP
EFCAB7
SNAP25
FARSA
SLC39A3
BCL7B
TTC26
IQGAP3
RABL2B
FBRS
PWWP2A
RBBP5
MARCHF4
TDRKH
METTL1
EEF1AKMT3
DCUN1D2
PDE6D
VPS50
HEPACAM2
SPDYE14
SPDYE10P
CCNG2
IDH3B
SUPT7L
SOD2
SLC4A1AP
NEK2
OSCAR
NDUFA3
FAM72C
PDE4A
SMG8
SPATA2
FAM227B
DTWD1
IPO4
NBPF15
CHGB
EPHA10
TPH2
COMMD2
CYP27B1
CDK7
NOL8
CENPP
SARS1
GATB
NFE2L2
LPIN1
LARP1
WDR4
TIMM17A
BNIP3L
BOLA2
SPOP
BIRC5
MTF2
KAT5
SLX1B
SLX1A
BOLA2B
HMGB1
HIBADH
SVOP
SF3A3
EPN1
RFC1
PRRC2B
WTAP
TRUB2
COQ4
SEC31A
DNAJC5
RFX1
SLC12A9
POLR3F
DZANK1
CPPED1
N6AMT1
EIF1AD
BANF1
KLHL18
KIF9
NOS3
PI16
NCAPH
UBE2L3
PSME3
PDE1C
COQ8A
RTTN
WDR36
SLC45A4
RTN4
NUP107
PAFAH2
THAP9
TXLNA
FNBP1
VIM
CBLL1
NRL
MRM3
GLOD4
COMMD9
RBM28
METTL25
CCDC59
NDUFS3
KBTBD4
CCDC88A
MRPL27
EME1
YARS1
S100PBP
PYY
NAGS
KDM3A
RBM8A
CDK5RAP1
GTF3C3
DHX40
SLC25A51
EBAG9
BOLA2-SMG1P6
SMYD5
RTF2
USP2
COL23A1
L1CAM
C6orf89
MFSD1
BIRC2
FAM72A
DRG2
INTS12
GSTCD
KLHL22
BCAS3
ATR
ASF1A
NSUN4
VTA1
NMBR
FAM72D
BAIAP2
YTHDF2
STAM2
HDAC2
NEIL3
MAPK8IP2
CRKL
ZNF684
C12orf66
ZNF581
PEX3
ADAT2
PLEKHM3
UTP11
CSTF1
AURKA
TRAPPC6A
BLOC1S3
IL1R1
USPL1
MTRNR2L9
TSFM
TBRG4
DCAF11
RRP12
TMEM199
POLDIP2
BSDC1
OGDH
DDX18
KLHL20
MRPL40
HIRA
C16orf71
ANKS3
NOP16
HIGD2A
CCDC106
MRPL44
MTIF2
HUS1
CCDC146
ATL3
STAT3
KIAA1586
RGPD1
RABGEF1
ACVR1
STX18
LRRC29
TOMM22
SEPTIN9
HNRNPD
NUP35
ZFPL1
CDCA5
ATG9B
ABCB8
IGF2BP3
FBXO5
CCDC86
UNG
ALKBH2
CKAP2L
CWC25
ATP6V0D1
AGRP
CMSS1
MACC1
PGAM5
TRIAP1
KIAA0895
NR1H2
RABEP2
DPY19L4
RAD51
KLHL32
FBXL13
ARMC10
USP54
D2HGDH
TOP3B
ARFGEF2
POM121
CCNA2
OPA1
GTF2H3
EIF2B1
MED23
INTS7
DTL
BLCAP
RAB5IF
AAR2
DYNC2I1
SNRPE
SASS6
VPS37D
GOLGA7
DZIP3
CIP2A
SUPV3L1
TTC31
LRRC59
RGPD2
TRMT6
MCM8
MRPL45
TTC27
CENPS-CORT
CENPS
KIF20A
BRD8
COX16
PMVK
SGO1
FAM228B
NDUFAF5
ESF1
TFB2M
CNST
PGBD5
GRWD1
TEKT2
ADPRS
PUS10
PEX13
LTV1
EBNA1BP2
CFAP57
RGL1
COASY
PFDN4
EDC3
DHX37
BRI3BP
MTBP
MRPL13
RABGAP1L
PIKFYVE
UTP3
ZC3HC1
GDAP1
RTEL1
GTF2H4
TBC1D19
ATG14
P2RX6
ABCB10
SLC24A1
RRM2
CACTIN
LSM5
GTF3C4
DDX31
MGAT5
TOMM40
SSNA1
ANAPC2
PHOSPHO2-KLHL23
PHOSPHO2
CCDC173
NOL6
ZC3H15
PSEN2
CLK3
MRPS23
URB1
C8orf33
THAP7
ZBTB45
CFAP298-TCP10L
CFAP298
ARPC5
WBP1
INO80B
TFB1M
GPATCH4
CYRIB
PIGU
GTPBP10
CFAP54
C5orf51
STMN3
TMEM262
RIMBP3C
NUCKS1
FAM72B
TMEM186
PMM2
PPIL2
CDC73
RBM42
PRMT2
PMF1-BGLAP
PMF1
RPTOR
CCNL1
PMS2
AIMP2
ZNF276
VPS9D1
NMNAT1
LZIC
NLE1
ARHGEF1
NOL7
LSM12
G6PC3
UBE2O
AANAT
ZP3
HEATR1
ZNF830
CCT6B
EXOSC5
BCKDHA
NOTCH2
DCLRE1B
AP4B1
TMEM41A
TACO1
ZNF165