ChIP-Atlas: Target genes

Potential target genes for HDAC2

Query protein: HDAC2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX116423 | K-562
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC2's Target genes

◢ HDAC2: Average

◢ SRX16386913: 293

◢ SRX3010110: A549

◢ SRX3010111: A549

◢ SRX24188777: BJ

◢ SRX24188786: BJ

◢ SRX20550182: BT67

◢ SRX20550183: BT67

◢ SRX20550184: BT67

◢ SRX20599715: Caco-2

◢ SRX20599717: Caco-2

◢ SRX017704: CD4+ T cells

◢ SRX687555: Erythroid progenitors

◢ SRX1053939: ES cells

◢ SRX1053948: ES cells

◢ SRX1053951: ES cells

◢ SRX1053958: ES cells

◢ SRX1053973: ES cells

◢ SRX1053977: ES cells

◢ SRX10616096: GM12878

◢ SRX10616097: GM12878

◢ SRX11374678: GM12878

◢ SRX11374679: GM12878

◢ SRX3322296: GM12878

◢ SRX3322297: GM12878

◢ SRX4909431: HCC3153

◢ SRX4909432: HCC3153

◢ SRX100538: Hep G2

◢ SRX10478224: Hep G2

◢ SRX10478225: Hep G2

◢ SRX2423815: Hep G2

◢ SRX2423816: Hep G2

◢ SRX100390: hESC H1

◢ SRX116457: hESC H1

◢ SRX186668: hESC H1

◢ SRX3694983: HL-60

◢ SRX3694988: HL-60

◢ SRX2023732: iPSC derived cardiac cells

◢ SRX2023764: iPSC derived cardiac cells

◢ SRX1053919: iPS cells

◢ SRX1053924: iPS cells

◢ SRX1053929: iPS cells

◢ SRX1053934: iPS cells

◢ SRX1053963: iPS cells

◢ SRX1053968: iPS cells

◢ SRX1053981: iPS cells

◢ SRX1053986: iPS cells

◢ SRX1053991: iPS cells

◢ SRX1053996: iPS cells

◢ SRX1054001: iPS cells

◢ SRX1054006: iPS cells

◢ SRX100516: K-562

◣ SRX116423: K-562

◢ SRX116424: K-562

◢ SRX186643: K-562

◢ SRX2423402: K-562

◢ SRX2423403: K-562

◢ SRX5457481: K-562

◢ SRX5457482: K-562

◢ SRX7135363: K-562

◢ SRX1514286: Kasumi-1

◢ SRX8064823: Lymphoblastoid cell line

◢ SRX8064824: Lymphoblastoid cell line

◢ SRX190281: MCF-7

◢ SRX2140211: MM.1S

◢ SRX11399800: NCI-H1963

◢ SRX11399801: NCI-H1963

◢ SRX11399802: NCI-H1963

◢ SRX9779520: NCI-H1963

◢ SRX4732741: Pre-B cells

◢ SRX7981741: Prostate cancer

◢ SRX7981742: Prostate cancer

◢ SRX7981743: Prostate cancer

◢ SRX7981744: Prostate cancer

◢ SRX4313202: RH-4

◢ SRX4313219: RH-4

◢ SRX4313220: RH-4

◢ SRX9562892: RH-4

◢ SRX9562897: RH-4

◢ SRX19212560: SK-N-MC

◢ SRX7643943: U-87 MG

◢ SRX059711: VCaP

◢ SRX059712: VCaP

◢ HDAC2: STRING

NPAS4
HTR5A
MTRNR2L2
MSH3
DHFR
LIN28A
WDR74
EPN1
RBM48
PEX1
MAMDC2
CCDC200
ZCWPW1
MEPCE
INSM2
MTRNR2L8
IQSEC3
MTRNR2L1
NKX1-1
FAM24A
NBPF1
NUP214
XKR7
MUC3A
CYB5R4
PYY
NAGS
ZCCHC7
NAGPA
PDE4A
NOS3
SPOP
EPHA10
PDE1C
DIO1
IBA57
CELSR3
XKR9
LACTB2
RGPD1
RGPD2
NPPB
TTC9B
SMIM17
NGB
DLGAP3
RTBDN
GET3
TJP3
KCNH7
GPATCH3
DPF1
CRBN
LPIN1
CACNG3
GBA
UBE2O
AANAT
RNF187
ZNF335
SMG8
SCG3
EMILIN2
RAP1GAP
SPNS1
CPPED1
NACAD
DRD2
TMEM204
EIF2D
LCN8
DPH2
HPCA
RBM19
DIABLO
CELF6
ADAMTS14
CEACAM16
ATL3
TMED1
NCLN
B3GNT3
SYMPK
FOXA3
FRG2C
NUF2
SUMF1
DHX40
PICK1
PKD2L2
FRG2
ANK1
PRG3
CPLX2
PRAME
UTP25
MICAL3
OSCAR
NDUFA3
RFC1
UBE3B
KCTD10
TTC26
KLHL18
KIF9
TRMO
MTRNR2L9
TCIRG1
UBE2L3
UTP20
PAFAH2
CAPN2
P2RX6
EBI3
PIN1
NBPF3
SYT11
GON4L
DNAAF3
KPNB1
NSUN5
METAP1D
CRKL
RXRA
TIGAR
CDK5RAP3
QTRT1
UNC45B
ZDHHC24
ACTN3
PPM1F
SYNJ2
SETD1A
PPP1R7
PASK
RIPOR1
HEXA
FNBP1
LSR
STEAP1B
UTP11
COL23A1
SFSWAP
FCHO1
THAP7
DNAJC11
NRCAM
RAB42
UFD1
CDC45
CHGB
ZNF280D
TOP3B
KANK2
TRIP4
POLD3
PDE4C
DNAJC18
TRMT1
NACC1
PRKCSH
CCDC151
RSPH14
RAB36
AP3B2
PRRC2B
MEGF9
VPS37C
DUX4
CALB1
PPIL2
SST
N6AMT1
SOGA1
ZC3HC1
SLC29A3
VPS50
HEPACAM2
PUS7
BARHL1
COASY
PDE4DIP
HAGH
FAHD1
RFX1
EIF3H
LCLAT1
MRPL40
HIRA
TIMM10
CENPS-CORT
CENPS
TTC7A
MCFD2
MKNK2
TASOR
SARS1
CCDC69
ADGRB2
KLHL22
TSEN54
CASKIN2
MARCHF8
VPS37D
COMMD9
RPS13
GSN
RAB14
TDRD7
ZNF77
CAMTA1
SNX16
ZNF555
ARID3B
POLR2J3
PAXBP1
NOTCH2NLC
RRP15
NOTCH2NLB
NOTCH2NLA
NDUFS7
NME1
WASHC2C
KXD1
CRNKL1
CFAP61
SLC35A4
APBB3
FANCD2
SERPIND1
TIPARP
ARCN1
KCTD18
ZMPSTE24
CCDC107
SPATA25
NEURL2
CTSA
AHCY
PSMD9
HPD
LAMP1
YJU2
PPT1
POLR3H
RAB37
TMEM248
VPS33A
WASHC2A
COPS7B
STX16
GSTA4
RPS19
TMEM242
SCFD2
MTFR2
EXO1
SSBP1
USP35
KCTD21
TTLL4
DHDDS
TATDN3
NSL1
WASHC5
NSMCE2
P4HA1
ZEB1
UBFD1
EARS2
TMEM120A
USP30
CALR
ITGB3BP
EFCAB7
SNAP25
FARSA
SLC39A3
BCL7B
IQGAP3
RABL2B
FBRS
PWWP2A
RBBP5
MARCHF4
TDRKH
METTL1
EEF1AKMT3
DCUN1D2
CDKN1A
PDE6D
SPDYE14
SPDYE10P
CCNG2
IDH3B
SUPT7L
SOD2
SLC4A1AP
KNL1
NEK2
RPS29
FAM72C
SPATA2
FAM227B
DTWD1
IPO4
H4C8
NBPF15
TPH2
COMMD2
CYP27B1
CDK7
NOL8
CENPP
GATB
NFE2L2
LARP1
WDR4
TIMM17A
BNIP3L
BOLA2
BIRC5
LUC7L2
MTF2
KAT5
SLX1B
SLX1A
BOLA2B
HMGB1
HIBADH
SVOP
SF3A3
CASC3
WTAP
TRUB2
COQ4
SEC31A
DNAJC5
COMMD4
SLC12A9
POLR3F
DZANK1
EIF1AD
BANF1
PI16
CBWD5
RDH5
NCAPH
BLOC1S1
PSME3
COQ8A
RTTN
WDR36
SLC45A4
RTN4
NUP107
CBWD3
THAP9
TXLNA
VIM
CBLL1
NRL
MRM3
MIS18A
GLOD4
RBM28
METTL25
CCDC59
NDUFS3
KBTBD4
CCDC88A
MRPL27
EME1
H4C14
YARS1
S100PBP
CCDC115
KDM3A
RBM8A
CDK5RAP1
GTF3C3
SLC25A51
EBAG9
BOLA2-SMG1P6
ITGA7
SMYD5
RTF2
USP2
POLG
L1CAM
C6orf89
MFSD1
BIRC2
FAM72A
DRG2
INTS12
GSTCD
BCAS3
ATR
ASF1A
NSUN4
VTA1
NMBR
FAM72D
BAIAP2
YTHDF2
STAM2
HDAC2
NUDT15
NEIL3
MAPK8IP2
ZNF684
C12orf66
ZNF581
PEX3
ADAT2
PLEKHM3
CSTF1
AURKA
TRAPPC6A
BLOC1S3
IL1R1
USPL1
C8orf37
POLR3E
TSFM
TBRG4
DCAF11
RRP12
TMEM199
POLDIP2
POLR3B
BSDC1
OGDH
DDX18
KLHL20
C16orf71
ANKS3
NOP16
HIGD2A
NAGK
CCDC106
MRPL44
MTIF2
HUS1
CCDC146
STAT3
KIAA1586
E2F6
B4GAT1
FMC1-LUC7L2
FMC1
RABGEF1
ACVR1
STX18
LRRC29
TOMM22
SEPTIN9
HNRNPD
NUP35
ZFPL1
CDCA5
ATG9B
ABCB8
IGF2BP3
FBXO5
CCDC86
AP1M1
UNG
ALKBH2
CKAP2L
CWC25
ATP6V0D1
AGRP
CMSS1
MACC1
PGAM5
TRIAP1
KIAA0895
NR1H2
RABEP2
DPY19L4
RAD51
KLHL32
FBXL13
ARMC10
QTRT2
CCDC191
USP54
D2HGDH
ARFGEF2
POM121
CCNA2
OPA1
GTF2H3
EIF2B1
MED23
INTS7
DTL
BLCAP
RAB5IF
BRMS1
AAR2
DYNC2I1
SNRPE
SASS6
GOLGA7
NBN
DZIP3
DNAJC25-GNG10
DNAJC25
CIP2A
SUPV3L1
TTC31
LRRC59
TMEM259
TRMT6
MCM8
MRPL45
TTC27
KIF20A
BRD8
COX16
PMVK
RAB11A
SGO1
FAM228B
NDUFAF5
ESF1
TFB2M
CNST
PGBD5
GRWD1
TEKT2
ADPRS
CBWD6
PUS10
PEX13
LTV1
EBNA1BP2
CFAP57
RGL1
PFDN4
EDC3
DHX37
BRI3BP
MTBP
MRPL13
RABGAP1L
NAT10
PIKFYVE
UTP3
GDAP1
RTEL1
GTF2H4
TBC1D19
ATG14
ABCB10
SLC24A1
RRM2
CACTIN
LSM5
GTF3C4
DDX31
MGAT5
TOMM40
SSNA1
ANAPC2
PHOSPHO2-KLHL23
PHOSPHO2
CCDC173
NOL6
DCT
ZC3H15
PSEN2
CLK3
MRPS23
URB1
C8orf33
ZBTB45
CFAP298-TCP10L
CFAP298
SACM1L
ARPC5
PCIF1
WBP1
INO80B
SAP30BP
RECQL5
TFB1M
GPATCH4
CYRIB
PIGU
GTPBP10
CFAP54
C5orf51
STMN3
TMEM262
RIMBP3C
NUCKS1
FAM72B
TMEM186
PMM2
CDC73
RBM42
PRMT2
PMF1-BGLAP
PMF1
RPTOR
CCNL1
H4C15
PMS2
AIMP2
NCOA7
ZNF276
VPS9D1
NMNAT1
LZIC
NLE1
ARHGEF1
NOL7
LSM12
SIRT4
G6PC3
ZP3
HEATR1
ZNF830
CCT6B
TSR3
GNPTG
EXOSC5
BCKDHA
NOTCH2
DCLRE1B
AP4B1
TMEM41A
TACO1
ZNF165
PPWD1
CENPK
NUP54
TFPT
PRPF31
TTC21B
FAM133B
SF3B6
IREB2
CNOT4
MRPS15
WDR46
PFDN6
SHOX2
RSRC1
RBKS
BABAM2
LZTR1
POLR3D
FAM98B
PRMT5
SECISBP2
PNO1
YIF1A
TMEM151A
RNASE4
ANG
TSN
TEFM
KIF18B
DPP9
ATP5F1E
ING3
RIMBP3B
C16orf87
TIGD1
EIF4E2
PDE11A
SWSAP1
CASTOR2
DSTYK
MTERF4
SPG21
BCAR3
ZKSCAN8
KIF15
KIAA1143
GOLM2
TPM4
SMIM12
CAP1
ZNF558
CENPF
RUVBL1
PPP6R1
EIF3F
FXN
POLN
HAUS3
BAG6
APOM
GATAD2A
UBE2Q1
PAK1IP1
C6orf52
LRP2BP
CCDC142
MRPS33
KLF1
TRMT61B
PUM3
NR6A1
NOL10
SPAAR
ZNF778
SRSF11
CDC25B
ACVR2A
MYNN
GFM1
ACTRT3
GCDH
SKA1
RPS27L
SELENOH
LRRC37A3
ANGPTL6
RPP25
TBC1D30
MMAA
CCDC25
RLF
PTPRF
WDPCP
STAT1
INTS5
RNF166
BNIP1
SLC25A26
RRS1
ADHFE1
CEP135
MIA3
TAF13
MRPL30
MITD1
ESCO2
TAMM41
MRPL48
RPAP3
ADNP
TSGA10
TMEM222
INKA2
ZGRF1
LARP7
DSCC1
EIF2B3
VPS26C
RPS7
TBP
PSMB1
PRCP
DDIAS
PARL
H4C3
H1-6
ARHGDIA
H6PD
C2orf42
PTPN4
CFAP299
ANKRD12
PARP2
ZCCHC14
NTAQ1
ANKRD37
MRPL1
SLC33A1
GLRA1
MCM7
INHA
AP4M1
PFKM
FBXO48
APLF
FBXO31
PLS1
SEC13
ESYT2
MDH1
FAM98A
TFIP11
ABCB6
LTA4H
PSMD3
PGK1
NADK2
TXNDC9
EIF5B
ATAD2
RUBCN
DDX41
KLHL12
DUS2
DDX28
POU2F1
ECSIT
WDR11
VPS45
CORO1C
KYAT1
RPL27
POC5
TOP3A
SMCR8
IMP4
SUGCT
MPLKIP
TMEM181
SNX17
EIF2B4
CCT2
MIS18BP1
OXNAD1
DPH3
SYNJ1
RBL1
CZIB
KIF2C
CHST12
CTPS1
TEX46
KDM1A
YDJC
MRPS18C
HELQ
CCDC116
AGBL3
PBK
RAD54L
INO80C
GRN
MRPS35
DDIT4
NEU1
METTL15
KIF18A
ACOX3
SLC35B1
IFNAR1
CALM2
SKA3
MRPL57
RHEBL1
BOD1
WDR62
THAP8
CLUAP1
HDAC11
TAF6L
MBIP
MLX
SULT1A4
SULT1A3
SMN2
SMN1
KDM2A
PHF19
PIGBOS1
PIGB
DIP2A
XRN2
PPIP5K2
SMG7
DUS3L
VPS29
RAD9B
PIH1D2
NKAPD1
TCF4
PCNA
DCAF10
COG2
SCNM1
LYSMD1
FAM89B
SGO2
TARS2
STX6
SKIV2L
NELFE
RPA2
GTF3C5
MRPL21
IGHMBP2
PPIH
AP5Z1
E2F1
RIOK1
CAND1
CAGE1
GFM2
PDRG1
C16orf46
RPP40
NDUFB3
FAM126B
DDX21
LMNA
FOXP1
COPS4
HCFC2
GLT8D2
ERMN
RC3H2
ZNF398
YBEY
MCM3AP
TRIM41
SLC44A1
TRIT1
IPO11
PALB2
DCTN5
NOC3L
RNASEH1
COMMD1
ZSCAN22
LSG1
MOB4
FAM207A
HSD17B8
SHC1
CKS1B
AVL9
NASP
ZNRD2
ZNF473
VRK3
HIP1
MTR
PRDM11
SHQ1
RAD54L2
SLC35A5
ATG3
POLR1B
HBP1
TIMM9
KIAA0586
FBXW8
CTU2
COMMD6
STBD1
GFI1B
TMEM9
EPRS1
SNRPC
NFIB
GALK2
CLSPN
SEC11A
LAMTOR5
MRPL39
EEF1AKNMT
C16orf90
PGLYRP4
DPH1
KTI12
PPM1B
VGLL4
FAM117B
S100A13
NUP155
GCLC
PRPSAP1
ATG5
PSMF1
PHC2
MYCL
DCP1A
DNAJB4
RTN4RL1
THG1L
PCM1
PLK3
POMZP3
MRTO4
EMC1
AIP
MRPL3
TRAPPC9
SRRD
SNRPB2
HPS4
ELF1
TTI2
WFDC3
MRPS28
DNTTIP1
CFAP20