ChIP-Atlas: Target genes

Potential target genes for HDAC2

Query protein: HDAC2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX11374679 | GM12878
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC2's Target genes

◢ HDAC2: Average

◢ SRX16386913: 293

◢ SRX3010110: A549

◢ SRX3010111: A549

◢ SRX24188777: BJ

◢ SRX24188786: BJ

◢ SRX20550182: BT67

◢ SRX20550183: BT67

◢ SRX20550184: BT67

◢ SRX20599715: Caco-2

◢ SRX20599717: Caco-2

◢ SRX017704: CD4+ T cells

◢ SRX687555: Erythroid progenitors

◢ SRX1053939: ES cells

◢ SRX1053948: ES cells

◢ SRX1053951: ES cells

◢ SRX1053958: ES cells

◢ SRX1053973: ES cells

◢ SRX1053977: ES cells

◢ SRX10616096: GM12878

◢ SRX10616097: GM12878

◢ SRX11374678: GM12878

◣ SRX11374679: GM12878

◢ SRX3322296: GM12878

◢ SRX3322297: GM12878

◢ SRX4909431: HCC3153

◢ SRX4909432: HCC3153

◢ SRX100538: Hep G2

◢ SRX10478224: Hep G2

◢ SRX10478225: Hep G2

◢ SRX2423815: Hep G2

◢ SRX2423816: Hep G2

◢ SRX100390: hESC H1

◢ SRX116457: hESC H1

◢ SRX186668: hESC H1

◢ SRX3694983: HL-60

◢ SRX3694988: HL-60

◢ SRX2023732: iPSC derived cardiac cells

◢ SRX2023764: iPSC derived cardiac cells

◢ SRX1053919: iPS cells

◢ SRX1053924: iPS cells

◢ SRX1053929: iPS cells

◢ SRX1053934: iPS cells

◢ SRX1053963: iPS cells

◢ SRX1053968: iPS cells

◢ SRX1053981: iPS cells

◢ SRX1053986: iPS cells

◢ SRX1053991: iPS cells

◢ SRX1053996: iPS cells

◢ SRX1054001: iPS cells

◢ SRX1054006: iPS cells

◢ SRX100516: K-562

◢ SRX116423: K-562

◢ SRX116424: K-562

◢ SRX186643: K-562

◢ SRX2423402: K-562

◢ SRX2423403: K-562

◢ SRX5457481: K-562

◢ SRX5457482: K-562

◢ SRX7135363: K-562

◢ SRX1514286: Kasumi-1

◢ SRX8064823: Lymphoblastoid cell line

◢ SRX8064824: Lymphoblastoid cell line

◢ SRX190281: MCF-7

◢ SRX2140211: MM.1S

◢ SRX11399800: NCI-H1963

◢ SRX11399801: NCI-H1963

◢ SRX11399802: NCI-H1963

◢ SRX9779520: NCI-H1963

◢ SRX4732741: Pre-B cells

◢ SRX7981741: Prostate cancer

◢ SRX7981742: Prostate cancer

◢ SRX7981743: Prostate cancer

◢ SRX7981744: Prostate cancer

◢ SRX4313202: RH-4

◢ SRX4313219: RH-4

◢ SRX4313220: RH-4

◢ SRX9562892: RH-4

◢ SRX9562897: RH-4

◢ SRX19212560: SK-N-MC

◢ SRX7643943: U-87 MG

◢ SRX059711: VCaP

◢ SRX059712: VCaP

◢ HDAC2: STRING

GSTA4
METTL26
MCRIP2
CCDC107
BORCS6
RAB11A
DUX4
HES7
ALOXE3
H4C8
DNAJB4
FRG2C
SACM1L
NDUFS7
BCAR3
CCDC200
B4GAT1
BRMS1
FBXO31
LASP1
DCT
SNX16
HSPA6
TRIM7
PRMT5
ELF1
WBP4
MED16
PCGF2
PSMB3
RNASE4
ANG
PLXDC1
LUC7L2
FMC1-LUC7L2
FMC1
MYNN
ACTRT3
LAMP1
ILF2
POLR3E
TMEM259
PSMA3
WDR74
OR1F1
TRIM41
H1-2
NCOA7
SHF
KNL1
KMT5B
ZNF839
PLEKHG2
PTPN6
C12orf57
DPP9
H3C13
H2BC18
PPEF1
RS1
C8orf37
FCHSD2
H4C11
MTRNR2L1
TIA1
POLG
H4C12
LTA4H
H3C15
H3C14
H2AC19
H2AC18
H4C3
H1-6
H3C3
H2BC3
HMGN4
H1-5
H3C11
H2AC16
ANXA2
DDX3X
VPS35
H2BC21
H2AC21
H2AC20
H2BC5
H1-4
WASF2
H4C14
H4C15
H4C7
H3C7
H2BC9
FRG2
RPL12
LRSAM1
SRSF7
H3C2
H4C2
H2AC4
ZBTB4
SLC35G6
POLR2A
H4C1
H3C1
H1-1
H4C6
SPRTN
EXOC8
H3C8
H2BC10
ZDHHC5
TMEM107
H2BC11
H2AC11
H1-3
H2BC12
H2AC12
H2BC8
H2AC8
DNAJB1
TRMO
POLDIP3
CBWD5
SMARCC2
VPS33A
SRSF3
RNASET2
HEXA
H4C4
H2BC6
CBWD3
CBWD6
BRPF1
CENPBD1
WASHC2C
H3C12
H2BC17
H2AC17
RDH5
BLOC1S1
ITGA7
FUS
FSCN1
ZNF335
NARF
CYP4F11
TSR3
GNPTG
PARP2
H2BC4
H2AC6
SRFBP1
C17orf97
INTS5
SIRT4
MARCHF8
EHD1
UBC
NAGK
C12orf65
HLTF
COMMD4
NBN
H3-3B
SLTM
H4-16
H2AJ
RPS29
AFF1
KCNC3
H4C9
MICU2
ING1
TMSB4X
CLSPN
HMGA1
CASC3
H4C5
SLCO5A1
IL4I1
NUP62
ATF5
CMTR2
MAT2A
PNP
PCIF1
TUBA1B
TMEM185B
WASHC2A
CAP1
CRCP
H4C13
CYP20A1
RABIF
NCOA5
TXN2
POLR2J3
SRSF6
VAMP1
CDKN2A
LIG4
ABHD13
VCP
COG6
HNRNPA2B1
CBX3
UBE2S
KLF7
ZBED9
STARD7
GTF2A1
POLR3B
CBWD1
BCLAF1
TCAIM
S100A13
ZSCAN30
CHTOP
EIF4A3
TSPOAP1
TRAF7
ERAP1
STX10
IER2
ANKRD26
PCNP
ARHGAP35
HAGH
FAHD1
FCMR
CTDP1
SLC9A1
CCDC115
ARMC5
H2BU1
H2AW
BTBD1
PRADC1
CCT7
PPP1R10
MRPS18B
MAGOHB
IMP3
TRA2B
LNPK
C6orf62
ZCWPW1
MEPCE
H2BC7
H3C4
H2AC7
GBA
CALR
FARSA
SPATS2
RPS9
CALM2
PCNA
GSK3B
RPL5
PXK
EIF1
STX3
CLK1
CSE1L
RNF169
ACAD9
PTPN23
GARS1
H3C10
ZNF518A
H2BC14
H2AC14
MRPL54
APBA3
PPP2R3B
HLA-DRA
MRPL17
GOLM2
MAP2K7
BAG6
APOM
RPP38
QSER1
CD74
H2BC13
H2AC13
HDAC4
NUDCD2
HMMR
DENR
ZFP69B
LRP2BP
ANKRD37
STAT6
VPS11
ZC3H10
RPL41
DUSP1
SMARCE1
NFKBIZ
NPAS4
HTR5A
MTRNR2L2
MSH3
DHFR
GSN
RAB14
XKR7
IQSEC3
TDRD7
MTRNR2L8
CPLX2
ZNF77
CAMTA1
SMIM17
NKX1-1
LIN28A
NBPF1
MAMDC2
ZNF555
INSM2
NUF2
ARID3B
CYB5R4
UTP20
MUC3A
PAXBP1
FAM24A
NOTCH2NLC
RRP15
NOTCH2NLB
NOTCH2NLA
NME1
KXD1
CRNKL1
CFAP61
SLC35A4
APBB3
RBM48
PEX1
FANCD2
PDE4DIP
SERPIND1
UTP25
TIPARP
ARCN1
KCTD18
TRMT1
NACC1
ZMPSTE24
NUP214
NAGPA
RNF187
SPATA25
NEURL2
CTSA
AHCY
PSMD9
HPD
SUMF1
CRBN
YJU2
KCNH7
PPT1
POLR3H
RAB37
TMEM248
RAB42
IBA57
COPS7B
STX16
HPCA
RBM19
TRIP4
RPS19
DLGAP3
QTRT1
TMEM242
SCFD2
MTFR2
EXO1
SPNS1
SSBP1
USP35
KCTD21
ZCCHC7
TTLL4
DHDDS
TATDN3
NSL1
WASHC5
NSMCE2
CELSR3
BARHL1
P4HA1
EIF2D
ZEB1
METAP1D
RTBDN
UBFD1
EARS2
TMEM120A
USP30
TIGAR
ITGB3BP
EFCAB7
SNAP25
SLC39A3
BCL7B
TTC26
IQGAP3
RABL2B
FBRS
PWWP2A
RBBP5
MARCHF4
TDRKH
METTL1
EEF1AKMT3
DCUN1D2
CDKN1A
PDE6D
VPS50
HEPACAM2
SPDYE14
SPDYE10P
CCNG2
IDH3B
SUPT7L
SOD2
SLC4A1AP
NEK2
OSCAR
NDUFA3
FAM72C
PDE4A
SMG8
SPATA2
FAM227B
DTWD1
IPO4
NBPF15
CHGB
EPHA10
TPH2
COMMD2
CYP27B1
CDK7
NOL8
CENPP
SARS1
GATB
NFE2L2
LPIN1
LARP1
WDR4
TIMM17A
BNIP3L
BOLA2
SPOP
BIRC5
MTF2
KAT5
SLX1B
SLX1A
BOLA2B
HMGB1
HIBADH
SVOP
SF3A3
EPN1
RFC1
PRRC2B
WTAP
TRUB2
COQ4
SEC31A
DNAJC5
RFX1
SLC12A9
POLR3F
DZANK1
CPPED1
N6AMT1
EIF1AD
BANF1
KLHL18
KIF9
NOS3
PI16
NCAPH
UBE2L3
PSME3
PDE1C
COQ8A
RTTN
WDR36
SLC45A4
RTN4
NUP107
PAFAH2
THAP9
TXLNA
FNBP1
VIM
CBLL1
NRL
GPATCH3
MRM3
MIS18A
GLOD4
COMMD9
RBM28
METTL25
CCDC59
NDUFS3
KBTBD4
CCDC88A
MRPL27
EME1
YARS1
S100PBP
PYY
NAGS
KDM3A
RBM8A
CDK5RAP1
GTF3C3
DHX40
SLC25A51
EBAG9
BOLA2-SMG1P6
SMYD5
RTF2
USP2
COL23A1
L1CAM
C6orf89
MFSD1
BIRC2
FAM72A
DRG2
INTS12
GSTCD
KLHL22
BCAS3
ATR
ASF1A
NSUN4
VTA1
NMBR
FAM72D
BAIAP2
YTHDF2
STAM2
HDAC2
NUDT15
NEIL3
MAPK8IP2
CRKL
ZNF684
C12orf66
ZNF581
PEX3
ADAT2
PLEKHM3
UTP11
CSTF1
AURKA
TRAPPC6A
BLOC1S3
IL1R1
USPL1
MTRNR2L9
TSFM
TBRG4
DCAF11
RRP12
TMEM199
POLDIP2
BSDC1
OGDH
DDX18
KLHL20
MRPL40
HIRA
C16orf71
ANKS3
NOP16
HIGD2A
CCDC106
MRPL44
MTIF2
HUS1
CCDC146
ATL3
STAT3
KIAA1586
E2F6
RGPD1
RABGEF1
ACVR1
STX18
LRRC29
TOMM22
SEPTIN9
HNRNPD
NUP35
ZFPL1
CDCA5
ATG9B
ABCB8
IGF2BP3
FBXO5
CCDC86
AP1M1
UNG
ALKBH2
CKAP2L
CWC25
ATP6V0D1
AGRP
CMSS1
MACC1
PGAM5
TRIAP1
KIAA0895
NR1H2
RABEP2
DPY19L4
RAD51
KLHL32
FBXL13
ARMC10
QTRT2
CCDC191
USP54
D2HGDH
TOP3B
ARFGEF2
POM121
CCNA2
OPA1
GTF2H3
EIF2B1
MED23
INTS7
DTL
BLCAP
RAB5IF
AAR2
DYNC2I1
SNRPE
SASS6
VPS37D
GOLGA7
DZIP3
DNAJC25-GNG10
DNAJC25
CIP2A
SUPV3L1
TTC31
LRRC59
RGPD2
TRMT6
MCM8
MRPL45
TTC27
CENPS-CORT
CENPS
KIF20A
BRD8
COX16
PMVK
SGO1
FAM228B
NDUFAF5
ESF1
TFB2M
CNST
PGBD5
GRWD1
TEKT2
ADPRS
PUS10
PEX13
LTV1
EBNA1BP2
CFAP57
RGL1
COASY
PFDN4
EDC3
DHX37
BRI3BP
MTBP
MRPL13
RABGAP1L
NAT10
PIKFYVE
UTP3
ZC3HC1
GDAP1
RTEL1
GTF2H4
TBC1D19
ATG14
P2RX6
ABCB10
SLC24A1
RRM2
CACTIN
LSM5
GTF3C4
DDX31
MGAT5
TOMM40
SSNA1
ANAPC2
PHOSPHO2-KLHL23
PHOSPHO2
CCDC173
NOL6
ZC3H15
PSEN2
CLK3
MRPS23
URB1
C8orf33
THAP7
ZBTB45
CFAP298-TCP10L
CFAP298
ARPC5
WBP1
INO80B
SAP30BP
RECQL5
TFB1M
GPATCH4
CYRIB
PIGU
GTPBP10
CFAP54
C5orf51
STMN3
TMEM262
RIMBP3C
NUCKS1
FAM72B
TMEM186
PMM2
PPIL2
CDC73
RBM42
PRMT2
PMF1-BGLAP
PMF1
RPTOR
CCNL1
PMS2
AIMP2
ZNF276
VPS9D1
NMNAT1
LZIC
NLE1
ARHGEF1
NOL7
LSM12
G6PC3
UBE2O
AANAT
ZP3
HEATR1
ZNF830
CCT6B
EXOSC5
BCKDHA
NOTCH2
DCLRE1B
AP4B1
TMEM41A
TACO1
ZNF165
PPWD1
CENPK
NUP54
TFPT
PRPF31
TTC21B
FAM133B
SF3B6
IREB2
CNOT4
MRPS15
WDR46
PFDN6
SHOX2
RSRC1
RBKS
BABAM2
LZTR1
POLR3D
FAM98B
SECISBP2
PNO1
UBE3B
KCTD10
YIF1A
TMEM151A
TSN
TEFM
KIF18B
ATP5F1E
ING3
RIMBP3B
C16orf87
TIGD1
EIF4E2
PDE11A
SWSAP1
CASTOR2
DSTYK
MTERF4
SPG21
ZKSCAN8
KIF15
KIAA1143
TPM4
SMIM12
ZNF558
UFD1
CDC45
CENPF
RUVBL1
PPP6R1
EIF3F
FXN
POLN
HAUS3
GATAD2A
UBE2Q1
PAK1IP1
C6orf52
CCDC142
MRPS33
KLF1
TRMT61B
PUM3
NR6A1
NOL10
SPAAR
ZNF778
SRSF11
CDC25B
ACVR2A
GFM1
GCDH
SKA1
RPS27L
SELENOH
LRRC37A3
SFSWAP
ANGPTL6
RPP25
TBC1D30
MMAA
SYT11
GON4L
CCDC25
RLF
PTPRF
WDPCP
STAT1
RNF166
BNIP1
SLC25A26
RRS1
ADHFE1
CEP135
MIA3
TAF13
MRPL30
MITD1
ESCO2
TAMM41
MRPL48
RPAP3
ADNP
GET3
TSGA10
TMEM222
INKA2
ZGRF1
LARP7
DSCC1
EIF2B3
VPS26C
RPS7
TBP
PSMB1
PRCP
DDIAS
PARL
ARHGDIA
PRAME
H6PD
C2orf42
PTPN4
CFAP299
ANKRD12
ZCCHC14
NTAQ1
MRPL1
SLC33A1
GLRA1
MCM7
INHA
AP4M1
PFKM
FBXO48
APLF
PLS1
SEC13
ESYT2
MDH1
FAM98A
TFIP11
ABCB6
PSMD3
PGK1
NADK2
TXNDC9
EIF5B
ATAD2
RUBCN
DDX41
KLHL12
DUS2
DDX28
POU2F1
ECSIT
WDR11
VPS45
CORO1C
KYAT1
RPL27
POC5
TOP3A
SMCR8
DNAJC11
IMP4
TMED1
SUGCT
MPLKIP
TMEM181
SNX17
EIF2B4
CCT2
MIS18BP1
OXNAD1
DPH3
SYNJ1
RBL1
CZIB
KIF2C
CHST12
CTPS1
TEX46
KDM1A
YDJC
MRPS18C
HELQ
CCDC116
AGBL3
PBK
RAD54L
ANK1
INO80C
GRN
MRPS35
DDIT4
NEU1
METTL15
KIF18A
ACOX3
SLC35B1
IFNAR1
SKA3
MRPL57
RHEBL1
BOD1
WDR62
THAP8
CLUAP1
HDAC11