ChIP-Atlas: Target genes

Potential target genes for HDAC2

Query protein: HDAC2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9779520 | NCI-H1963
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC2's Target genes

◢ HDAC2: Average

◢ SRX16386913: 293

◢ SRX3010110: A549

◢ SRX3010111: A549

◢ SRX24188777: BJ

◢ SRX24188786: BJ

◢ SRX20550182: BT67

◢ SRX20550183: BT67

◢ SRX20550184: BT67

◢ SRX20599715: Caco-2

◢ SRX20599717: Caco-2

◢ SRX017704: CD4+ T cells

◢ SRX687555: Erythroid progenitors

◢ SRX1053939: ES cells

◢ SRX1053948: ES cells

◢ SRX1053951: ES cells

◢ SRX1053958: ES cells

◢ SRX1053973: ES cells

◢ SRX1053977: ES cells

◢ SRX10616096: GM12878

◢ SRX10616097: GM12878

◢ SRX11374678: GM12878

◢ SRX11374679: GM12878

◢ SRX3322296: GM12878

◢ SRX3322297: GM12878

◢ SRX4909431: HCC3153

◢ SRX4909432: HCC3153

◢ SRX100538: Hep G2

◢ SRX10478224: Hep G2

◢ SRX10478225: Hep G2

◢ SRX2423815: Hep G2

◢ SRX2423816: Hep G2

◢ SRX100390: hESC H1

◢ SRX116457: hESC H1

◢ SRX186668: hESC H1

◢ SRX3694983: HL-60

◢ SRX3694988: HL-60

◢ SRX2023732: iPSC derived cardiac cells

◢ SRX2023764: iPSC derived cardiac cells

◢ SRX1053919: iPS cells

◢ SRX1053924: iPS cells

◢ SRX1053929: iPS cells

◢ SRX1053934: iPS cells

◢ SRX1053963: iPS cells

◢ SRX1053968: iPS cells

◢ SRX1053981: iPS cells

◢ SRX1053986: iPS cells

◢ SRX1053991: iPS cells

◢ SRX1053996: iPS cells

◢ SRX1054001: iPS cells

◢ SRX1054006: iPS cells

◢ SRX100516: K-562

◢ SRX116423: K-562

◢ SRX116424: K-562

◢ SRX186643: K-562

◢ SRX2423402: K-562

◢ SRX2423403: K-562

◢ SRX5457481: K-562

◢ SRX5457482: K-562

◢ SRX7135363: K-562

◢ SRX1514286: Kasumi-1

◢ SRX8064823: Lymphoblastoid cell line

◢ SRX8064824: Lymphoblastoid cell line

◢ SRX190281: MCF-7

◢ SRX2140211: MM.1S

◢ SRX11399800: NCI-H1963

◢ SRX11399801: NCI-H1963

◢ SRX11399802: NCI-H1963

◣ SRX9779520: NCI-H1963

◢ SRX4732741: Pre-B cells

◢ SRX7981741: Prostate cancer

◢ SRX7981742: Prostate cancer

◢ SRX7981743: Prostate cancer

◢ SRX7981744: Prostate cancer

◢ SRX4313202: RH-4

◢ SRX4313219: RH-4

◢ SRX4313220: RH-4

◢ SRX9562892: RH-4

◢ SRX9562897: RH-4

◢ SRX19212560: SK-N-MC

◢ SRX7643943: U-87 MG

◢ SRX059711: VCaP

◢ SRX059712: VCaP

◢ HDAC2: STRING

MTRNR2L1
PPT1
ZMPSTE24
ZNF684
CAP1
MBIP
SKA1
PPIE
TRIT1
EXO5
UTP20
RPH3A
RLF
ARHGEF2
RABL2B
MRPL45
HPCAL4
TRMT1
NACC1
RPS29
IQGAP3
NT5C1A
CDK7
MYCL
SSH2
CRNKL1
CFAP61
SHCBP1
RAD51
QTRT1
NUF2
PF4
PPBP
MFSD2A
TRAPPC6A
BLOC1S3
GCNT2
DHX37
BRI3BP
POLR3D
UTP25
NCAPH
C12orf66
DIAPH3
WDR7
BMP8B
ATP6V0D1
AGRP
NBN
MOK
ADAT1
ZP4
FAM72C
FAM72D
PSME3
GRWD1
PAX9
HSPA12A
ENO4
MTFR2
PMAIP1
RTTN
LAMP1
MAB21L2
TRMT61A
RRP15
SEMA3C
COX8C
SPACA1
C16orf71
ANKS3
HEATR1
DUX4
DZIP3
CIP2A
GPATCH4
WDR74
WDR4
BIRC5
AP1S1
TIMM21
FBXO15
ZNF24
SLF2
SPATA25
NEURL2
CTSA
ATP5F1A
HAUS1
NBPF1
CDC20
CORO2A
CFAP299
BLM
PUM3
CCDC102B
TMX3
EXO1
ACVR1
PHB2
RIOK3
CDC16
FANCI
ZCCHC7
METAP1D
SRCAP
LOC730183
FBXO5
UFD1
CDC45
KIF23
RBKS
BABAM2
URB1
KPNA2
UNG
ALKBH2
ZGRF1
LARP7
KIF2C
BOLA2
SLX1B
SLX1A
BOLA2B
BOLA2-SMG1P6
LYPLAL1
COMMD6
UCHL3
METTL11B
SMYD5
DPH1
RTN4RL1
SCFD2
TICRR
MOCS2
FAM72A
DMAC1
MIS18A
APRT
AURKB
MAGI1
TTK
LYRM4
FARS2
PLEKHD1
FRG2C
PNO1
RBM19
FAM200B
TMEM241
UTP4
DERPC
CHTF8
EDC3
GTF3C4
DDX31
IFNG
VPS4B
CKAP2L
TRAPPC8
KATNAL2
HDHD2
METTL1
EEF1AKMT3
CYP27B1
NOL6
WWP2
ZNF77
TOM1
AEN
NEK2
TTC27
TFB2M
CNST
CD46
NPC1
POU2F1
CCT2
WDR26
CFAP53
CCNA2
CENPS-CORT
CENPS
PRR3
GNL1
FBXW9
RPRD1A
MZT1
BORA
PRLHR
NUDT2
KIF24
ARMC2
AIP
SLC25A17
TAF13
CKS2
RNF125
CCNG2
TMEM186
PMM2
USP37
CNOT9
COMMD4
RDH5
BLOC1S1
ITGA7
TRAPPC2L
GALNS
VPS33A
ATL3
NKX2-1
CEP135
MRPL1
PPP1R3B
DSEL
HEXA
RBBP8
MYDGF
TAF4B
IKBKB
KIAA0895
POLR2J2
ANLN
MRPL11
GBA
FAAP24
CEP89
KAT5
LRRC49
THAP10
PPP1R10
MRPS18B
TIMELESS
PIK3C3
KIF22
MRM3
GLOD4
AP1B1
STAM2
CCDC86
SULT1A4
SULT1A3
TBC1D4
COL9A2
USP2
RPS3A
RETNLB
WASHC5
NSMCE2
MCM10
PEX19
DDX5
CEP95
SLC35D1
CYB5R1
NTAQ1
CLSPN
STK36
RNF25
PCCA
TFAP2A
ZNF558
ZNF408
ARHGAP1
MCRS1
TROAP
VPS41
CYB5R4
E2F3
SLC38A8
GUSB
FAM183A
SH3KBP1
BCAS3
CCNB1
CYP21A2
RNF138
MRPS33
PMVK
FAM72B
POLR1B
DPH2
ATP6V0B
CRISPLD1
ADPGK
SLC39A6
ELP2
DCUN1D2
LRATD2
CDK18
TIMM9
KIAA0586
H1-2
TOMM70
LNP1
RBL2
NKX2-8
SLC12A9
ZFPL1
CDCA5
TMEM262
ZNF778
ADSL
C16orf46
POLQ
CCDC25
ESCO2
LETMD1
RFX5
VPS26B
NCAPD3
QTRT2
CCDC191
PMS2
AIMP2
WDR61
HUS1
INTS9
HMBOX1
SUGP2
ARMC6
NME7
BLZF1
RMC1
PDP2
TRIP4
PTPRD
CLK3
RPS27L
SHC1
CKS1B
METTL18
C1orf112
CLYBL
MRPL27
EME1
DDX19A
SPG7
MAK16
STK11IP
TBC1D16
CCDC40
C6orf89
SECISBP2
HNRNPU
NAT10
PBK
NOC3L
SMC2
MBD1
NOL10
TAF6L
CENPH
CDC25B
KIAA0513
RFWD3
WDR3
GDAP2
TDO2
KIF18B
VPS11
ING5
HSPBP1
BRSK1
DLGAP5
DIS3
SPG21
TCF4
DHODH
RPUSD4
FAM118B
ARL13B
ZBTB37
TAF1A
RPTOR
TFIP11
FAM161B
COQ6
HROB
WDR18
ASPM
CCDC146
NOB1
USP35
KCTD21
EBNA1BP2
CFAP57
DIRAS2
GLE1
PDE4B
EFCAB6
DCUN1D1
DDHD1
MTRNR2L2
MSH3
DHFR
PSMD9
HPD
PSEN2
PTPN4
PIF1
UPF3A
MYBBP1A
CHRNA9
SFXN2
ARL3
LEMD3
GPX4
SPNS1
NUP35
SGO2
MCOLN1
CLN5
GEMIN6
RNF187
PWP1
CCDC39
HASPIN
PIPOX
KNL1
SF3A3
MRPS28
STAP2
MPND
F11R
SCRN3
CIR1
TXNL4B
DHX38
UTP11
IPO11
THADA
FKBP1A
ESPL1
KIF14
COMMD5
RPL17-C18orf32
RPL17
C18orf32
MFSD1
PACRGL
CENPN
RPUSD2
CCDC32
LACTB
LHFPL1
RFC1
PPIH
RIOK1
CAGE1
ERCC5
GAR1
PPIB
VTI1B
RRP12
SASS6
POLN
HAUS3
PRPF38A
ORC1
ALKBH8
GTSE1
CXXC1
CALHM4
PISD
TM9SF1
RASL11B
GNB3
DHX40
MRPL24
CNDP2
ARID3B
LRRC29
MTR
DYRK1B
ZNF594
RGS8
TXLNA
PRCP
DDIAS
STYXL1
MDH2
VAC14
NOP9
DHRS1
TAF1C
ADAD2
DYRK3
ZNF598
ERCC3
IER3IP1
DHDDS
TEKT2
ADPRS
SMG5
TMEM79
ISG20
RCL1
SP4
TSTD1
TRUB2
COQ4
SWSAP1
TOP3A
SMCR8
CHST12
SPCS1
GLT8D1
ZSCAN30
YIPF3
POLR1C
ACADM
SRD5A1
NSUN2
MND1
SMAD2
PIGU
TBC1D30
GNS
UQCRC2
TWNK
MRPL43
MELK
DGKB
MCM5
CRYBG3
PDE11A
RNF166
CTU2
ZNF202
TSACC
CCT3
SPATA4
IREB2
SCNM1
LYSMD1
WDHD1
SOCS4
POP7
RPF2
RANBP6
COQ9
CIAPIN1
TRAF5
RPP40
CNPY3
NEMP1
BCL9
ANAPC7
PDCD2L
GATB
CARS2
NYAP1
CASP7
PDE8A
AP2S1
CEP295
ARFGAP2
TMEM9B
GRAMD2A
IPO4
PCNT
C21orf58
MDN1
TTC23L
CCNB2
ATP6V0A1
SNRPA
C19orf54
ZNF396
LRRN3
WDPCP
MDH1
LMNA
CDIP1
RNF40
CCDC189
MAPRE2
KLHDC4
RNH1
UBE2C
MEX3A
ENOX2
SSR2
CRELD2
ALG12
ZNF587
FAM98B
TTF2
RSPH14
RAB36
BAZ1B
FAM234B
GCSH
GALNT1
NUP107
WDR46
PFDN6
RRS1
ADHFE1
DIMT1
INPP5K
TMEM260
SENP7
EHMT1
CBWD5
CBWD3
CBWD6
NIP7
COG8
SOCS3
ST8SIA3
KXD1
NSFL1C
PIK3CA
DNMT3B
TMEM234
EIF3I
XRN2
FBXW8
NPL
SLF1
KIAA0825
INO80
GFUS
ZSCAN29
TUBGCP4
SLC14A1
SLC35A4
APBB3
GPATCH3
E2F6
WDR62
THAP8
ATF3
PRIM2
PIGO
ABHD3
DAD1
PARP9
DTX3L
SCG5
ZNF276
VPS9D1
ACOX3
TMED5
CCDC18
SNX19
PPP1R14D
SF3B4
UBE2Q1
ACTR6
SLC7A6OS
PRMT7
FCF1
AREL1
ORC2
NUDT1
MRM2
SMYD3
MAP11
POLR2J3
SERP1
EIF2A
SLC35A3
RSPH3
SZT2
MED8
CFDP1
DOLPP1
MRPL12
KIZ
RCCD1
ACYP1
ZWILCH
RPL4
OLFM3
ZC2HC1C
EXOSC5
BCKDHA
LRP2BP
ANKRD37
VPS35
SLC35B2
SCAMP3
SDE2
GINS3
ARL2BP
CEP128
GOLPH3L
RAVER1
PHLPP2
C18orf21
GNL2
MED20
BYSL
DENR
NCAPH2
LMF2
CHAC1
POLD1
MLN
NAGPA
TRMT6
MCM8
INO80C
CDK5RAP3
CEP162
ZNF33A
BRCA1
MRM1
TPGS2
PDF
BAG4
LSM1
FBL
GPR107
TMEM178A
OR2T34
GPN1
CCDC121
TK1
AFMID
EIF3D
RTF1
IBA57
COMMD9
BAG6
APOM
VPS45
COG2
PPIL1
SLC38A7
WDR5B
RASAL2
DPP4
PLS1
PTRHD1
CENPO
DDX19B
VPS72
FBXO43
POLR2K
PPP1R12B
CEP126
MUL1
ANGPTL5
SF3A1
CCDC157
DYNLL1
PLK4
TIGD4
ARFIP1
PTCD2
MRPS27
PYGO2
LOC101928120
DNAH14
MVD
MAGEA2B
MAGEA2
SPATA2
LTV1
ZNF721
PIGG
NUDT9
SMIM5
H3C15
H3C14
H2AC19
H2AC18
SPATA33
HNRNPH2
GLA
DPY19L4
GTF2H3
EIF2B1
ZCCHC14
ZNF473
VRK3
MTHFR
NOLC1
CLCN6
TTI1
RPRD1B
RBM7
C11orf71
TTC5
NCKAP5L
PFDN2
NIT1
EXOSC3
DBF4B
CFAP206
LAP3
SPAG1
OGDH
KLHL20
KLF1
GCDH
DUS2
DDX28
PPIL3
NIF3L1
CYB5A
THAP5
DNAJB9
GINS1
ABCA3
PIGW
MYO19
PSMB4
MRPS18C
HELQ
NASP
POLD3
SRP54
USP36
NOM1
TTC39C
ZNF701
NAGK
NCOA7
STAT1
RECQL
GOLT1B
URB2
TAF5L
SMC4
IFT80
PCID2
CUL4A
SNAP47
JMJD4
ZZEF1
CYB5D2
VPS8
CEP43
ASH1L
FUBP3
LMAN1
EPYC
CFAP54
EIF2B3
BUB1B
HJURP
IGSF9
RHNO1
FOXM1
TK2
CKLF-CMTM1
CKLF
ZBBX
MCF2L
LAMA3
RAB23
HEG1
S100A13
AAAS
CHTOP
RAB5B
STOML2
IQCG
TIPIN
SLC25A44
POLA2
EIF4A1
LMLN
TMEM147
KLF5
RIT1
ANGPTL6
LTN1
PPAN-P2RY11
PPAN
TTLL9
CNPY2
COA3
CNTD1
LRRC57
HAUS2
MXD3
ARIH1
EIF2AK1
ZNF507
IPO9
P2RY11
ZCWPW1
MEPCE
CENPF
KMT2D
SPTY2D1
TONSL
KLC2
BCL7A
NF2
SERPINB4
METTL25
CCDC59
WBP1
INO80B
NOC4L
DDX51
SETD4
XPO5
POLH
PRRT1
PPT2
MAD2L1
COX19
ZBTB7C
JAM3
EHD3
CAPN14
EIF2D
NDUFAF5
ESF1
CDC73
SHOX2
RSRC1
RBL1
NDUFB3
FAM126B
CDC6
CHCHD3
PARPBP
NUP37
MEA1
HYKK
GRHL3
ARMCX5-GPRASP2
ARMCX5
NEIL3
TMEM41A
SAXO2
EFL1
MRI1
SNRPD2
QPCTL
EXOC1
TEPSIN
NDUFAF8
TMEM231
IFT57
ZNF669
CIART
LY75-CD302
LY75
BOLA1
NUP214
POLR3H
CALR
FARSA
MIA3
VPS26C
AKR1A1
CWF19L1
SLC35C2
EDC4
MRE11
ANKRD49
OXR1
E2F2
POLR2C
AIFM1
BLMH
USP21
ACAA2
LAGE3
EML5
EEF1AKNMT
RANGAP1
L3HYPDH
JKAMP
BRAP
ACAD10
PELP1
TIPRL
TXNL4A
DPH5
ASB8
RBFA
BLOC1S2
NDUFAF2
ERCC8
WDR90
MFSD5
MED25
FUZ
ZNF319
USB1
ZNF223
C2orf42
ECSIT
CDT1
KCTD9
CDCA2
USP32
DHX33