ChIP-Atlas: Target genes

Potential target genes for HDAC2

Query protein: HDAC2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX116424 | K-562
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC2's Target genes

◢ HDAC2: Average

◢ SRX16386913: 293

◢ SRX3010110: A549

◢ SRX3010111: A549

◢ SRX24188777: BJ

◢ SRX24188786: BJ

◢ SRX20550182: BT67

◢ SRX20550183: BT67

◢ SRX20550184: BT67

◢ SRX20599715: Caco-2

◢ SRX20599717: Caco-2

◢ SRX017704: CD4+ T cells

◢ SRX687555: Erythroid progenitors

◢ SRX1053939: ES cells

◢ SRX1053948: ES cells

◢ SRX1053951: ES cells

◢ SRX1053958: ES cells

◢ SRX1053973: ES cells

◢ SRX1053977: ES cells

◢ SRX10616096: GM12878

◢ SRX10616097: GM12878

◢ SRX11374678: GM12878

◢ SRX11374679: GM12878

◢ SRX3322296: GM12878

◢ SRX3322297: GM12878

◢ SRX4909431: HCC3153

◢ SRX4909432: HCC3153

◢ SRX100538: Hep G2

◢ SRX10478224: Hep G2

◢ SRX10478225: Hep G2

◢ SRX2423815: Hep G2

◢ SRX2423816: Hep G2

◢ SRX100390: hESC H1

◢ SRX116457: hESC H1

◢ SRX186668: hESC H1

◢ SRX3694983: HL-60

◢ SRX3694988: HL-60

◢ SRX2023732: iPSC derived cardiac cells

◢ SRX2023764: iPSC derived cardiac cells

◢ SRX1053919: iPS cells

◢ SRX1053924: iPS cells

◢ SRX1053929: iPS cells

◢ SRX1053934: iPS cells

◢ SRX1053963: iPS cells

◢ SRX1053968: iPS cells

◢ SRX1053981: iPS cells

◢ SRX1053986: iPS cells

◢ SRX1053991: iPS cells

◢ SRX1053996: iPS cells

◢ SRX1054001: iPS cells

◢ SRX1054006: iPS cells

◢ SRX100516: K-562

◢ SRX116423: K-562

◣ SRX116424: K-562

◢ SRX186643: K-562

◢ SRX2423402: K-562

◢ SRX2423403: K-562

◢ SRX5457481: K-562

◢ SRX5457482: K-562

◢ SRX7135363: K-562

◢ SRX1514286: Kasumi-1

◢ SRX8064823: Lymphoblastoid cell line

◢ SRX8064824: Lymphoblastoid cell line

◢ SRX190281: MCF-7

◢ SRX2140211: MM.1S

◢ SRX11399800: NCI-H1963

◢ SRX11399801: NCI-H1963

◢ SRX11399802: NCI-H1963

◢ SRX9779520: NCI-H1963

◢ SRX4732741: Pre-B cells

◢ SRX7981741: Prostate cancer

◢ SRX7981742: Prostate cancer

◢ SRX7981743: Prostate cancer

◢ SRX7981744: Prostate cancer

◢ SRX4313202: RH-4

◢ SRX4313219: RH-4

◢ SRX4313220: RH-4

◢ SRX9562892: RH-4

◢ SRX9562897: RH-4

◢ SRX19212560: SK-N-MC

◢ SRX7643943: U-87 MG

◢ SRX059711: VCaP

◢ SRX059712: VCaP

◢ HDAC2: STRING

NPAS4
MTRNR2L2
MSH3
DHFR
HTR5A
MTRNR2L8
MAMDC2
XKR7
IQSEC3
EPN1
RTBDN
NKX1-1
LIN28A
HPCA
NUP214
TUBA1A
RBM48
PEX1
INSM2
MUC3A
FAM24A
MICAL3
ZNF335
MTRNR2L9
TDRD7
CPLX2
RFX1
EIF2D
SFSWAP
L1CAM
PYY
NAGS
MTRNR2L10
SYT11
GON4L
SUMF1
WDR74
EPHA10
PDE4A
RGPD1
RGPD2
SMIM17
NCLN
NACAD
RIMBP3C
RIMBP3B
DIO1
RIMBP3
TOP3B
CYB5R4
SNX16
ZCCHC7
MTRNR2L1
FRG2C
CHGB
PMF1-BGLAP
PMF1
MACIR
TIGAR
DLGAP3
UBE2L3
CACNG3
OSCAR
NDUFA3
RAB42
MAPK8IP2
CKMT1A
P2RX6
PPIP5K1
CKMT1B
NBPF1
MFSD4B
PIN1
CELSR3
NPPB
UTP20
MANEAL
CLVS1
FRG2
NAGPA
GPR158
COL23A1
UFD1
CDC45
NEU1
PRAME
SCG3
PSMD9
HPD
BARHL1
SNAP25
GET3
SHFL
NUCKS1
SDC3
TJP3
MTRNR2L6
RTL10
GNB1L
TTC9B
GJD3
EMILIN2
ADCYAP1
RBM19
TMEM181
FIBCD1
ANK1
SLC18A3
CHAT
CCDC200
KREMEN2
PAQR4
PICK1
FBXO5
USP35
KCTD21
UQCR11
ANKHD1-EIF4EBP3
ANKHD1
SCRT1
TPBGL
USP30
SVOP
CIZ1
DHX40
TOMM22
MEGF9
TRAF1
VPS37D
GPR78
TRIM48
SPATA2
ATL3
TEKT2
ADPRS
CEACAM16
MAPK1
KCNH7
GNB4
PPFIA3
C19orf73
RAB37
PGBD5
ZCWPW1
MEPCE
VARS1
UBE2O
AANAT
NEK6
PKDREJ
TTC38
TRMT1
NACC1
WASHC2C
KLHL18
KIF9
CRKL
SLC6A6
C1QTNF8
UNC45B
UTP11
FAM72C
FAM72A
GFOD1
FAM72D
MRPL40
HIRA
KIF18B
MICALL2
NBPF3
TRIP13
BRD9
FEM1A
CDKN1A
ACBD6
DYSF
TSR3
GNPTG
GBA
PDE4C
CHRM4
METAP1D
RRM2
CYRIB
FAM72B
TSPAN13
CCDC25
ESCO2
SST
FNBP1
GTF2H3
EIF2B1
PCBP3
CRBN
DNAJC11
IER5L
DUX4
NBPF15
LPIN1
C6orf136
IDH3B
UBE3B
KCTD10
TSEN2
LHFPL4
RAP1GAP
ADAMTS14
RFC1
CTPS1
ODF2
ARHGAP28
YPEL1
RRP15
C12orf66
METTL2B
WASHC2A
DHX37
BRI3BP
TMEM121B
DPF1
SGSM1
ESYT2
VPS37C
RASGRP2
QTRT1
RABIF
E2F6
SLC25A24
CREG1
INPP5B
IL1RL1
NUP35
HNRNPD
RPA2
C1orf109
CDCA8
TMEM199
POLDIP2
KCNK12
ANKRD36C
SYNJ2
TCF19
CCHCR1
LCMT2
ADAL
WSCD2
BOD1
NRCAM
SOGA1
CDC7
BRAF
VPS50
HEPACAM2
CBX8
C15orf39
S100A8
COASY
ZC3H15
DNAJC6
CCDC92B
TRAPPC2L
GALNS
SLC66A3
SMYD5
NAT10
PHC2
EPC2
TIMM10
ITPR3
NOP16
HIGD2A
GPATCH4
PPIL2
ACVR2A
KTI12
TAS1R1
NOL9
LRRFIP2
EML2
PAFAH2
GPATCH3
HSD17B8
RING1
PUS7
SYMPK
FOXA3
MRPS26
GNRH2
CSRNP1
ALX4
CRNKL1
CFAP61
PIK3CD
ZBTB32
GATA1
PTGFRN
RSPH14
RAB36
ITGAV
PDLIM7
SLC4A1
KCTD15
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
C8orf33
CHST12
AP3B2
EBI3
DNA2
ACE
RABEP2
NOL6
ST6GAL1
TSTD2
NCBP1
SPDEF
SPNS1
YDJC
CCDC116
BUB1B
ZNF718
ZNF595
AMER3
IL12RB1
IBA57
CLK3
NTAN1
CBLL1
TRAIP
LRP11
CASZ1
FABP6
GGACT
COLGALT2
PGPEP1
APOA1
LOC388282
SCGN
LTV1
XPC
LSM3
TADA1
SLC27A4
GATB
FUT11
DGAT2
HEXA
GRM1
R3HDM4
KISS1R
DRG2
DRD2
CD83
LYSMD2
RPP25
GRPEL2
SNAP29
PI4KA
MARCHF11
CMIP
AEN
SLC12A9
PSME3
VTA1
NMBR
THAP7
ASNS
DGCR8
PNPLA6
ZFYVE26
RAD51B
OGDHL
TMEM191B
KLHL21
TARBP1
OXNAD1
DPH3
C20orf204
FAM78A
H4C11
CLN6
CRH
PMS2
AIMP2
ZSCAN30
IQGAP2
PPIA
PRELID2
NME1
SPDYE14
SPDYE10P
SRRD
HPS4
XRCC2
CNNM3
AKT2
FDX2
SRXN1
BCAT1
AIF1L
ALG1
TRMT2A
RANBP1
STOX1
CDC25B
OAZ3
ZFYVE1
THOC3
IMMP2L
EXOSC2
HSPA1B
MAPK11
TAP1
PSMB9
CBFA2T2
GADD45B
GRIK1
ZNF830
CCT6B
CNOT4
SETD1A
SFT2D3
NFE2L2
ATP5PO
DUSP1
NSMAF
PWWP2A
LUC7L2
FMC1-LUC7L2
FMC1
KDM4A
SMIM11B
SMIM11A
DGCR6L
PPM1G
CARD11
SLC39A3
PDE1C
VAC14
KAT6B
PKD2L2
CCDC69
FNDC10
OR2L13
OR2AJ1
FOXD4L1
ZC3HC1
PRRT3
SRSF7
ANKRD36B
ZNF596
PYCR3
ARRDC2
CERS6
ASCL2
USP54
EPS15
SLC38A10
CYP51A1
STX7
RCCD1
COTL1
OGFOD1
NUDT21
CXCL3
SPATA25
NEURL2
CTSA
MIS18A
GTF3C4
DDX31
CASTOR2
AGBL3
PCNA
ATP6V0E2
RECQL4
LRRC14
PERP
EBNA1BP2
CFAP57
DCLRE1B
AP4B1
KIF2C
UBIAD1
TRAP1
GRWD1
RBSN
SORBS1
GTPBP3
ANO8
SELPLG
CACTIN
HDAC11
ZDHHC12
POLQ
OPRL1
LKAAEAR1
LINGO1
CDC42BPG
TMEM70
ELOC
LEF1
ANKRD63
BOLA2
SLX1B
SLX1A
BOLA2B
BOLA2-SMG1P6
SKA3
MRPL57
NOM1
VHL
RAB33B
DOLPP1
MRPL2
KLC4
FAH
HRK
TMEM242
KLHL22
TSEN54
CASKIN2
MRTO4
EMC1
UBE2H
MYPOP
PIP4P2
NR2F6
MISP3
N6AMT1
KIAA0895
PIGBOS1
PIGB
ANLN
NUDT2
KIF24
POLR3G
MBLAC2
TMEM191C
AQP11
SDF2L1
KLHL36
SUFU
ACTR1A
TMEM248
DHDDS
TRUB2
COQ4
DNTTIP2
CDK11B
CDK11A
PHF20
ADARB1
SRGAP1
TBX1
CENPS-CORT
CENPS
URB1
OIP5
NUSAP1
HNRNPLL
H2BU1
H2AW
TCIRG1
MYT1
LRRC8B
OAF
VPS33A
BIRC5
CPPED1
MFSD1
LZTR1
HLTF
NSUN5
NOB1
LCN8
GLRA1
MYCL
CFAP73
TTC26
CCNA2
POLR1B
EIF3H
DGUOK
ZNF75A
TIGD7
PRSS16
PHACTR2
CNTRL
C5
TMEM210
GALNT2
LRRC26
GSTK1
DGCR2
OXTR
YIF1A
TMEM151A
SAR1B
CHCHD3
TNFRSF21
TASOR2
XXYLT1
MYLIP
AGK
AKAIN1
MTFR2
CCT2
JMJD1C
PITPNA
VSNL1
KAT2B
PLK1
FCHO1
CENPE
DLK2
C3orf80
MYO18A
ZNF280D
HACE1
TENT5C
FRMD6
COX14
TRMT61A
NAE1
OTULIN
EXOSC6
ATE1
PAXBP1
SYNJ1
XYLB
RNF141
ZNF74
COMMD1
FBXO4
CCT4
RPUSD2
CCDC32
MMP24
ZKSCAN4
HACD3
SCCPDH
PAX4
KLF1
GCDH
FBXO28
TNFRSF8
SARS1
C5orf51
CYB561D1
STIL
USP48
MTHFD1
TMEM51
UTP25
RNF187
MARCHF4
CFAP298-TCP10L
CFAP298
THEM6
CRELD1
PPP1R7
PASK
COMT
B3GNTL1
RARG
TXNRD2
PDE4DIP
ANKRD36
CBFB
ADAM19
TOP3A
SMCR8
ZNF398
TRIM67
GALNT11
FAM181B
PTPRB
NSFL1C
TTF2
ANXA7
RNASEH2C
ECI2
CFAP299
SNX8
CREB3L2
DGAT1
GSDMD
VPS35
BRAP
ACAD10
TBC1D22A
ID3
PLD1
OGFOD3
HEXD
DHH
NUDT3
GAREM2
TMEM184A
CENPN
PINX1
CDKAL1
GPC6
CPNE9
METTL15
KIF18A
ITPR2
PLLP
SRSF10
SSBP1
BIRC6
GGCT
RDH5
BLOC1S1
ITGA7
POLR2J
GPATCH1
ITSN1
CRYZL1
RAB39A
QKI
H1-10
DMTN
SPOCD1
RTTN
OXR1
ZMPSTE24
SOD2
ACAT2
NOL7
C22orf39
C16orf71
ANKS3
GAA
MCUB
SAMD13
RAD51
SCAF11
METTL1
EEF1AKMT3
CYP27B1
STX11
STK40
AKAP1
GSN
RAB14
ZNF77
CAMTA1
ZNF555
NUF2
ARID3B
POLR2J3
NDUFS7
KXD1
SLC35A4
APBB3
FANCD2
SERPIND1
TIPARP
ARCN1
KCTD18
CCDC107
AHCY
LAMP1
YJU2
PPT1
POLR3H
COPS7B
STX16
GSTA4
TRIP4
RPS19
SCFD2
EXO1
TTLL4
TATDN3
NSL1
WASHC5
NSMCE2
P4HA1
ZEB1
TRMO
UBFD1
EARS2
TMEM120A
CALR
ITGB3BP
EFCAB7
FARSA
BCL7B
IQGAP3
RABL2B
FBRS
RBBP5
TDRKH
DCUN1D2
PDE6D
CCNG2
SUPT7L
SLC4A1AP
KNL1
NEK2
RPS29
SMG8
HAGH
FAHD1
FAM227B
DTWD1
IPO4
H4C8
TPH2
COMMD2
CDK7
NOL8
CENPP
LARP1
WDR4
TIMM17A
BNIP3L
SPOP
MTF2
KAT5
HMGB1
HIBADH
SF3A3
CASC3
PRRC2B
WTAP
SEC31A
DNAJC5
COMMD4
POLR3F
DZANK1
EIF1AD
BANF1
NOS3
PI16
CBWD5
NCAPH
COQ8A
WDR36
SLC45A4
RTN4
NUP107
CBWD3
THAP9
TXLNA
VIM
NRL
MRM3
GLOD4
COMMD9
RBM28
METTL25
CCDC59
NDUFS3
KBTBD4
CCDC88A
MRPL27
EME1
H4C14
YARS1
S100PBP
CCDC115
KDM3A
RBM8A
CDK5RAP1
GTF3C3
SLC25A51
EBAG9
RTF2
USP2
POLG
C6orf89
BIRC2
INTS12
GSTCD
BCAS3
ATR
ASF1A
NSUN4
BAIAP2
YTHDF2
STAM2
HDAC2
NUDT15
NEIL3
ZNF684
ZNF581
PEX3
ADAT2
PLEKHM3
CSTF1
AURKA
TRAPPC6A
BLOC1S3
IL1R1
USPL1
C8orf37
POLR3E
TSFM
TBRG4
DCAF11
RRP12
POLR3B
BSDC1
OGDH
DDX18
KLHL20
NAGK
CCDC106
MRPL44
MTIF2
HUS1
CCDC146
STAT3
KIAA1586
B4GAT1
RABGEF1
ACVR1
STX18
LRRC29
SEPTIN9
ZFPL1
CDCA5
ATG9B
ABCB8
IGF2BP3
CCDC86
AP1M1
UNG
ALKBH2
CKAP2L
CWC25
ATP6V0D1
AGRP
CMSS1
MACC1
PGAM5
TRIAP1
NR1H2
DPY19L4
KLHL32
FBXL13
ARMC10
QTRT2
CCDC191
D2HGDH
ARFGEF2
POM121
OPA1
MED23
INTS7
DTL
BLCAP
RAB5IF
BRMS1
AAR2
DYNC2I1
SNRPE
SASS6
GOLGA7
NBN
DZIP3
DNAJC25-GNG10
DNAJC25
CIP2A
SUPV3L1
TTC31
LRRC59
TMEM259
TRMT6
MCM8
MRPL45
TTC27
KIF20A
BRD8
COX16
PMVK
RAB11A
SGO1
FAM228B
NDUFAF5
ESF1
TFB2M
CNST
CBWD6
PUS10
PEX13
RGL1
PFDN4
EDC3
MTBP
MRPL13
RABGAP1L
PIKFYVE
UTP3
GDAP1