ChIP-Atlas: Target genes

Potential target genes for HDAC4

Query protein: HDAC4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX11525512 | SK-UT-1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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HDAC4's Target genes

◢ HDAC4: Average

◢ SRX2140208: MM.1S

◢ SRX8213853: SK-LMS-1

◢ SRX11525509: SK-UT-1

◣ SRX11525512: SK-UT-1

◢ SRX13466113: SK-UT-1

◢ SRX13466116: SK-UT-1

◢ SRX6054277: SK-UT-1

◢ HDAC4: STRING

MAMDC2
WDR74
STX5
DUX4
LOC102724770
DGCR6
SNX16
SPATC1L
FRG2C
MTRNR2L1
COL23A1
TNFRSF19
FRG2
MTRNR2L2
MSH3
DHFR
EAPP
MUC3A
DNM2
PAFAH2
SP2
ADAMTS9
LY6L
CCDC200
DDX49
COPE
CDCA3
FEM1A
PHRF1
H4C3
H1-6
UNK
H3-3B
TMEM242
KIF5C
EVI5L
RFX1
TCEA2
CLPB
IL32
RWDD1
TESK2
MMACHC
UCKL1
GSPT1
PHF12
SLC25A25
NAIF1
BOD1
MTRNR2L8
DDX23
PNPLA6
ST3GAL2
ADAMTSL1
NAA80
IFRD2
HYAL3
H4C12
H4C11
H2BC14
H2AC14
ANKHD1-EIF4EBP3
ANKHD1
SCAF1
RRAS
RPS7
PHB
MRPL24
SLC8A1
TXNRD1
CHMP4B
ARHGAP35
AP2S1
FBXL19
PSMD11
RAB5B
PMEL
CDK2
CCAR2
C8orf58
HEXB
VIPAS39
AHSA1
ZNF268
ZSCAN22
UNKL
C16orf91
OR6B2
NDUFA10
VPS50
HEPACAM2
POLR3F
DZANK1
CIC
PNKD
GPBAR1
AAMP
MRI1
C19orf53
SLC35E2B
MAPKAPK5
ZNF225
NFKBIL1
DDX39B
ATP6V1G2
TMEM94
H4C14
H3C15
H3C14
H4C15
H2AC19
H2AC18
UBE2T
PPP1R12B
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
MRPL21
IGHMBP2
PEX14
DFFA
MRPL11
DSTYK
FASTKD1
VEZT
FGD6
PAK1IP1
C6orf52
BANP
PEMT
FAP
SLC25A41
KHSRP
RAG2
IFTAP
RANBP2
SULT1A4
SULT1A3
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
TNFAIP8L2-SCNM1
TNFAIP8L2
TMOD4
SCNM1
LYSMD1
S1PR4
NCLN
EMCN
SUCLG1
SMPD3
UBQLN4
RAB25
LAMTOR2
NUF2
VTI1B
YJU2
THRAP3
AURKAIP1
ZNF143
WDPCP
MDH1
TBL1X
SEC61B
TAOK3
SUDS3
NUP205
GATB
PES1
C1orf159
GDE1
CCP110
LMNB2
OSBP
TSNAX
CABCOCO1
NAV3
SUPT7L
SLC4A1AP
TMEM115
NPRL2
CYB561D2
IRF2BP2
SYMPK
FOXA3
PRRG2
NOSIP
MRPS7
MIF4GD
GGA3
PRCC
RPL9
LIAS
PDE6D
COPS7B
RPS27A
CLHC1
NR1H3
ACP2
CLCN5
TARS2
UBAC1
RBBP5
MALL
TAF12
REXO1
ID3
NLK
ING4
TMEM262
ZNF570
ZNF569
WDR53
FBXO45
MTOR
TSNAXIP1
RANBP10
ZNF335
ADGRA1
TNFRSF12A
THOC6
HCFC1R1
CLDN6
GPAA1
EXOSC4
KRT39
FAM168A
CCDC90B
AHCYL2
SP1
INTS9
HMBOX1
ZNF513
SNX17
EIF2B4
SCRIB
C19orf48
RNASEH2A
PRDX2
ING3
STX16
H4C2
H4C1
H3C2
H3C1
H2AC4
H1-1
POLDIP3
TBL3
RPS2
RNF151
NOXO1
PPRC1
SIRT4
POLR2E
GPX4
AP2M1
WDR97
MAF1
CYC1
HNRNPL
TEPSIN
NDUFAF8
NEBL
TSC2
NTHL1
ZNF235
NOC4L
DDX51
TOM1L2
DRC3
FBH1
ANKRD16
SPAAR
HRCT1
ZNF547
TRAPPC2B
CACTIN
DYNC1I2
STK36
RNF25
H2BC4
H2AC6
USP48
OR4N2
STAM2
VARS2
GTF2H4
CAPN15
SUPV3L1
ISY1-RAB43
ISY1
INVS
ERP44
COMMD1
CCT4
TACO1
ZFYVE1
KDM6B
ZNF585B
ZNF383
SUFU
ACTR1A
RPGRIP1L
FTO
RGS19
OPRL1
LKAAEAR1
LYRM4
FARS2
TEKT2
ADPRS
NDC80
METTL4
UFD1
CDC45
ZFYVE19
DNAJC17
ATP5MG
IPO13
SF3A3
KRR1
FAM149B1
ECD
NDUFS3
KBTBD4
FAM180B
OAZ3
GOSR1
BUB1B
SYP
PRICKLE3
RPS3
PEX26
AXDND1
KATNB1
DPH6
ARID5B
ARL4D
CALR3
C19orf44
HDGF
EHF
HDAC9
H2BC15
H2AC15
GALM
RPS20
TSN
OR4M1
LRRC29
HNRNPC
H3C4
TMEM70
PARP16
ELOC
RPL32
LRCH4
FBXO24
TP53I3
SF3B6
FAM228B
ID1
ORMDL3
GSDMB
LARS1
TSSC4
GSK3A
ERF
SLC35B1
LSG1
ZNF165
OR1F12
OR4Q3
PIN4
NUDCD1
ZNF17
CCDC146
H4C5
H2BC7
H2AC7
ZNF687
GPR137
TMEM107
RGPD2
RGPD1
BMP5
SSR3
SPSB3
NUBP2
MRPS34
EME2
PROSER3
LIN37
HSPB6
TRIP10
GPR108
PRR14
FBRS
ZMYND10
STT3A
UTP3
TFPT
PRPF31
TXNDC5
ARID2
STAM
VCPIP1
C8orf44-SGK3
G3BP1
SIRT2
NFKBIB
UFSP2
C4orf47
MTRNR2L9
BMF
SP5
TM4SF18
RPL36
MICOS13
HSD11B1L
FRMPD4
CYCS
GBA
SART3
ISCU
SLC39A1
CRTC2
CREB3L4
ART1
TIMM21
FBXO15
PRR5L
COMMD9
RARB
OLFML2A
NR6A1
SHC1
FLAD1
CKS1B
ZNF608
STIP1
NUDT13
NUP107
AK2
TMEM60
PHTF2
KIF2C
TMEM11
WT1
COX16
TIPARP
RXFP4
KHDC4
RPIA
ZNF691
RGS14
LMAN2
EIF2AK3
CCDC174
ZBTB38
ZNF417
TBL1XR1
MRPL53
MOGS
WDR46
RGL2
PFDN6
PSPN
ALKBH7
KIAA0895L
EXOC3L1
ELMO3
E2F4
ZNF444
PTPN6
PIGL
NCOR1
MEIS1
FARSB
UBR2
DOK3
DDX41
TULP2
NUCB1
NFIB
KBTBD6
CNIH4
ARHGEF9
PANK4
MED27
HES5
GOSR2
SPHK2
RPL18
FAM83E
TRDMT1
EXOSC5
BCKDHA
ANAPC5
METTL3
OST4
KHK
FAM187A
EMILIN1
EFTUD2
CCDC103
SRSF11
LRRC40
SLX4IP
MKKS
BAHCC1
TMTC3
CEP290
SEC11C
INTS1
PSMC5
FTSJ3
TTI2
HEXIM2
EIF3F
NMT1
DCAKD
PSENEN
IGFLR1
SNAP25
SMG8
NME1
RAB11B
SSBP1
ZSWIM3
ACOT8
PWWP2A
PHB2
TXNDC2
NPAS4
RNF121
MTRNR2L10
LOC100133315
BAZ2A
ATP5F1B
SAMD1
NDUFS7
MISP3
EMILIN2
C19orf67
ZNF337
BCL3
COX7C
TATDN3
NSL1
WFIKKN1
METTL26
MCRIP2
VMO1
PSMB6
GLTPD2
CDK5RAP2
SUGP1
MAU2
TCERG1
VWA5A
GTF3C3
C2orf66
ZFPL1
CDCA5
UBE2I
ZNF576
IRGQ
ZNF48
TBC1D10B
MYLPF
HMX2
BUB3
PCM1
KRT19
KRT15
ZNF548
TINF2
NEDD8-MDP1
NEDD8
GMPR2
H4C8
SMAD3
PTPRH
MRPL28
CLN3
APOBR
ATG4C
ARL4C
RPS6KB2
PTPRCAP
ATP6V1G1
ZMAT2
HARS2
HARS1
ZBTB45
SLC27A5
MRPL30
MITD1
CAND1
BCL2L1
NPIPA1
SEL1L
C12orf43
ANKRD28
EMP3
NDUFAF5
ESF1
BABAM1
RHOT2
RHBDL1
CCNL1
EMC4
USP17L22
USP17L21
USP17L20
USP17L12
TRAF7
RAB26
ZC3H10
SMARCD2
RPL41
DHX8
CTU1
CCDC124
HNRNPUL1
PDE4DIP
KRT23
EXD2
SLC25A20
UBC
CTDP1
RBL1
PHF19
FNDC3A
ZNF500
SEC13
RPL18A
ZNF776
EXOC4
GSTO2
WNK4
VPS25
SMARCAL1
PPP1R12C
TRMO
PABPN1
SRD5A1
NSUN2
SSBP2
TRIP4
PCLAF
PPP6R1
PPP5D1
GUF1
CALM3
ZNF773
NOP16
HIGD2A
CD79A
ARHGEF1
DLGAP1
ZNF140
PLA2G4A
C5orf38
TMEM160
SNX1
CIAO2A
CD2BP2
CRADD
TOP2A
MTRF1
EPS15
IARS2
BPNT1
RCAN1
FBXW11
TRAPPC6B
PNN
ZNF211
RPL37
CARD6
DYNC2I2
CCL3
COPS7A
TARBP1
SYT7
TLE3
ZCCHC4
SLC39A9
PCBP1
MT2A
ERH
SRCIN1
RPAIN
PRORP
PPP2R3C
NUP88
GRAMD2B
CENPA
ZAR1
TBP
SSBP3
PSMB1
ZNF286A
PEX2
INO80C
GET3
FCF1
AREL1
STK25
SLC25A19
NDUFB3
FAM126B
ABT1
SH3RF2
H4C4
H2BC6
USP30
HEATR5B
GPATCH11
ZNF688
JOSD2
CSDE1
ASPDH
UVRAG
DMAC1
ZNF628
USP22
NAT14
TMEM109
PRPF19
BRWD1
SESN1
CEP57L1
AP1G1
ANGPTL2
ZCCHC8
TM9SF4
RPL35A
IQCG
RABAC1
GLIPR1L1
CAPS2
RPL27
IFI35
TRAPPC9
SHPK
PTEN
KLLN
CTNS
ZC3H12A
NDUFB5
MRPL47
PLA2G15
TOR1AIP2
TOR1AIP1
SULT2B1
INTS10
MATR3
UBE2J1
PNISR
MRPS23
PITX3
HEMK1
GBF1
C3orf18
SF3B3
COG4
GTF2I
RPL14
SNAPC1
MYOM2
GABPB2
XAB2
STXBP2
PCP2
BMERB1
PMF1-BGLAP
PMF1
GORAB
VRK1
ARHGAP17
TJP3
HSPA9
FCRL5
SREK1IP1
CWC27
ZSCAN5A
SIX1
NTMT1
C9orf50
TBC1D17
PNKP
AKT1S1
COMMD2
CDCA8
C1orf109
ARHGEF2
THAP11
NVL
RAD52
IER3
FLOT1
TMEM63C
UTP11
HMOX1
FHL3
ENPP4
CLIC5
CCDC138
LTA4H
KLHL29
ASAH2
TXNL4B
THYN1
STAT1
IRAG1
DHX38
ACAD8
TOMM40L
PEX3
DENND1B
DBP
CA11
APOA2
ALKBH3
ADAT2
KCTD5
B4GALT3
KLF2
RMDN2
TRIM55
PTDSS2
ATP2C1
ANO9
TPRKB
XPNPEP3
ST13
KLF6
FUT10
DNAJB7
TIMMDC1
THRA
CCDC110
TRAPPC3
MAP7D1
ZBTB5
HEXA
MRPS18C
HELQ
RAP2B
HBP1
TXNDC11
C1orf198
NGB
GCLC
LNPEP
MDM2
IFNGR2
TSPO
MCAT
CHPF2
ATF4
ABCF2-H2BE1
ABCF2
ADO
SCT
DRD4
CDHR5
ACTL6A
ZNF56
RUFY3
RTRAF
RTF2
ESYT1
COX7A2L
GUCY2D
PEAK1
HMG20A
FAM177B
CXCR5
CCL5
CCDC39
TOM1
TMEM256
PLSCR3
NLGN2
TTC33
TGIF1
CYTH3
MDM4
SMCO1
ZPBP2
IKZF3
NLRP3
NCOA7
MNT
KAT6B
AIM2
SNRPB
VPS52
RPS18
NPR1
ILF2
IL17A
B3GALT4
NUP153
RBM25
RASAL2
NDUFC2-KCTD14
NDUFC2
NAT16
HCAR3
CHST12
RIIAD1
MAP2K3
IRF2BPL
CELF3
SNX15
HDAC7
ANP32C
KMT2C
GLDN
EML2
DPP9
CRYBB1
BTRC
ZNF226
LTN1
POLG
PARP2
LAMP1
CCNB1IP1
FGG
CRYAA2
CRYAA
RGS8
MUC20
MACC1
DHX33
ZNF384
SKA2
PRR11
PHC2
KANSL3
ID2
FER1L5
TJP1
MRPL20
MRPL1
MAPK11
DCP1B
COG3
CCNL2
UBE2H
DRAP1
DAGLB
C11orf68
RNF213
PXMP2
POLE
LOC102723996
ICOSLG
USP3
SUPT4H1
MNX1
ZNF639
COPS8
CCM2
CBWD5
TUBG1
RPS13
RETREG3
LAS1L
HSD11B1
ELOVL1
CDYL
CDC20
BDH1
PSMD4
CBWD6
CBWD3
SLC2A4RG
MED23
LIME1
PAX5
WHAMM
RABL2A
FSD2
TRIM48
STMN3