ChIP-Atlas: Target genes

Potential target genes for HDAC4

Query protein: HDAC4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2140208 | MM.1S
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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HDAC4's Target genes

◢ HDAC4: Average

◣ SRX2140208: MM.1S

◢ SRX8213853: SK-LMS-1

◢ SRX11525509: SK-UT-1

◢ SRX11525512: SK-UT-1

◢ SRX13466113: SK-UT-1

◢ SRX13466116: SK-UT-1

◢ SRX6054277: SK-UT-1

◢ HDAC4: STRING

KIF5C
MTRNR2L2
MSH3
DHFR
MTRNR2L8
RGPD2
RGPD1
TXNDC5
MTRNR2L9
FRMPD4
HDAC9
MAMDC2
TIPARP
ARHGEF9
MTRNR2L10
EMILIN2
UTP3
PTPN6
PCM1
ZBTB38
ANKRD28
PDE4DIP
SLC25A20
FNDC3A
SSBP1
PPP5D1
CALM3
PLA2G4A
C5orf38
TOP2A
EPS15
ARID5B
IARS2
BPNT1
DUX4
MTRNR2L1
CCL3
SYT7
SRCIN1
RPAIN
NUP88
ZAR1
INO80C
HEATR5B
GPATCH11
CSDE1
UVRAG
HNRNPUL1
USP22
BRWD1
ANGPTL2
GLIPR1L1
CAPS2
TRAPPC9
PTEN
KLLN
PLA2G15
INTS10
MATR3
SPATC1L
UBE2J1
SF3A3
GTF2I
MYOM2
PMF1-BGLAP
PMF1
ARHGAP17
TJP3
FCRL5
PHF19
SIX1
TBC1D17
PNKP
AKT1S1
ARHGEF2
RAD52
ENPP4
CLIC5
CCDC138
KLHL29
EAPP
ASAH2
STAT1
FBH1
TOMM40L
DENND1B
APOA2
B4GALT3
KLF2
PROSER3
LIN37
HSPB6
RMDN2
ATP2C1
LY6L
KLF6
FUT10
TARS2
CCDC110
CCDC90B
RAB11B
MRPS18C
HELQ
RAP2B
TXNDC11
C1orf198
NGB
GCLC
LNPEP
MDM2
IFNGR2
ATF4
SCT
DRD4
CDHR5
ACTL6A
WDR74
STX5
RUFY3
H3C4
H4C4
H2BC6
GUCY2D
TRIP4
PCLAF
FAM177B
CXCR5
CCL5
CCDC39
ATP6V1G1
TOM1
PSPN
ALKBH7
TMEM256
PLSCR3
NLGN2
CYTH3
MDM4
SMCO1
ZPBP2
IKZF3
NLRP3
NCOA7
MNT
AIM2
NPR1
ILF2
IL17A
SULT1A4
SULT1A3
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
RASAL2
NAT16
HCAR3
CHST12
KATNB1
HDAC7
ANP32C
KMT2C
GLDN
EML2
DPP9
CRYBB1
POLG
FGG
CRYAA2
CRYAA
XAB2
STXBP2
PCP2
RGS8
SKA2
PRR11
KANSL3
FER1L5
TJP1
MAPK11
COG3
NDUFS7
UBE2H
DRAP1
DAGLB
C11orf68
COMMD2
LOC102723996
ICOSLG
SH3RF2
USP3
SUPT4H1
MNX1
MUC3A
ZNF639
CCM2
CBWD5
MRPS23
TUBG1
RETREG3
HSD11B1
ELOVL1
CDYL
CDC20
BDH1
USP30
PSMD4
CBWD6
CBWD3
SLC2A4RG
MED23
LIME1
PAX5
SMARCD2
WHAMM
FSD2
AURKAIP1
TRIM48
FMO4
TP63
BBX
GUCY1A1
FOXK1
FAAP24
CEP89
SERPINB5
LEFTY2
CMSS1
TEPSIN
NDUFAF8
HOOK1
AQR
LSG1
RAD51AP2
C2orf42
RBBP5
TPST1
RAD51AP1
C16orf72
C12orf4
WBP1L
WAPL
SELENOH
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
FETUB
CBWD1
INSR
AMPD3
H4C14
H3C15
H3C14
H4C15
GBA
WFIKKN2
SATB1
KDSR
CSNK1G3
CCR2
H4C3
H1-6
CRB1
TACO1
NUDT13
SPTLC3
KIF16B
TIMM22
RAB40B
LRRC14B
PRPF18
INTS1
TMEM109
PRPF19
SLC33A1
POLD1
NR1H2
CCDC77
PWWP2A
STAP2
MPND
DPEP3
DPEP2
DHX8
LUC7L2
GALK2
FMC1-LUC7L2
FMC1
COPS2
POLR3F
DZANK1
CD79A
ARHGEF1
STOML2
PIGO
MFAP3L
FAM214B
ERVMER34-1
EPYC
COPZ1
CCL3L3
CCL3L1
ZNF451
TYK2
TNK2
RBM28
TNFAIP8L2-SCNM1
TNFAIP8L2
TMOD4
SCNM1
LYSMD1
ZNF609
TLR5
ZMYND8
SCGB1C2
SCGB1C1
RGS3
RAP2A
ODF3
MYCBP2
FCGR3A
EPRS1
NDUFS3
KBTBD4
FAM180B
TXK
DHX16
CLEC7A
TBX19
NPIPB5
GPR84
CHD6
RHOT2
RHBDL1
PNISR
GORAB
HSBP1
DENND3
BIN2
SLC25A41
KHSRP
PPP6R1
RPL35A
IQCG
ZSWIM1
UNC93B1
SPATA25
HAX1
ECT2
CTSA
CRYBA4
ALDH3B1
NUF2
COMMD1
CCT4
SLC9A1
OXCT2
MAPKAPK2
KLHL20
PLCD3
DMAP1
ARNTL
ACBD4
LTA4H
TDRKH
OR8D2
SMARCA4
IFIT1
ACTA1
TMEM107
MGP
NLK
SSR3
TSC1
PSAP
MTFR2
GFI1B
TOMM40
MACIR
CCT8
TUT1
SCAMP4
MYNN
MTA2
F11R
EMX1
CLPTM1L
ADAT3
ACTRT3
FRG2
ZNF668
ZNF646
SH3GL1
P2RY10
OCSTAMP
DAPK3
CHAF1A
EVI5L
BAHCC1
RRP1
NSMCE3
JRK
FAM207A
CSTB
ARID3B
TFB2M
CYP2R1
CNST
CCDC61
LPIN1
KIF22
ITGB1BP1
CPSF3
TRIM7
RPL27A
PARP16
ZBTB5
SNCA
GPR174
FAM83B
FRG2C
YJU2
ZNF718
ZNF595
ZMPSTE24
STBD1
PGP
LCOR
FAM184A
E4F1
BRICD5
SHC1
FLAD1
CKS1B
EIF2AK3
TTC21A
SYNE4
RAB11A
LOC101927572
GTF2H2C_2
GTF2H2C
GORASP1
FBXO38
ALKBH6
WFIKKN1
METTL26
MCRIP2
UBE2I
WIPF1
RSF1
POLR2J3
AAMDC
TMEM218
STK17B
LYZL2
GGCT
PRR14
FBRS
UTS2R
TRNAU1AP
TP53TG5
SYS1
SRI
KCNN3
KAT7
DNAJC14
CCDC167
PRRG2
NOSIP
TAS2R38
NAA35
MAP3K13
HUNK
GSR
ATP5MC2
TTC39C
OSBPL2
FMN1
ADRM1
SNAP47
SACM1L
JMJD4
FRYL
FDXR
DDI2
CDC23
ZBTB32
TNFRSF17
NPIPB2
NBEAL2
KIFBP
KDELR1
KCNH1
GRIN2D
DDX1
CCNC
CCDC12
RFX1
ZNF696
TIFA
SMARCE1
ISOC2
GOLPH3L
FMO1
RPS27
RAB13
PHC3
NUCKS1
IDH2
HSD17B4
TP53I3
SF3B6
FAM228B
AP1G1
PCDH1
NCBP2AS2
NCBP2
MORC3
HARBI1
DLGAP2
DCP1A
ATG13
CCNL1
TLDC2
TAF3
BABAM1
AP2M1
RHBDF2
H4C12
H4C11
PAFAH2
UBE2T
PPP1R12B
H2BC15
H2AC15
INTS4
GATD3B
GATD3A
CHD9
AK2
RPL27
IFI35
GABPB2
ZNF519
TRAPPC6A
PPP1R37
MRPS17
MKNK2
EMID1
DHX15
BLOC1S3
ALG10B
AHCY
TOMM6
RAC3
PRICKLE4
OLIG1
LRRC45
FRS3
FBXO11
CENPX
ARL1
TLR4
TAB1
RSPH6A
NR1D1
MLLT1
GTF2H2
FLT3LG
ENDOD1
PSMD5
FAM72D
FAM72C
CDKAL1
CCRL2
KRR1
TATDN3
NSL1
SMAD3
TSACC
THADA
STIL
CCT3
SLC25A25
NAIF1
RABEP1
PXMP4
MGAT3
FBXO40
EIF4A2
CNIH3
PARP8
LY9
GOT1
DNM2
SLC39A3
RBSN
P4HB
NOTCH2
NOL6
TIPRL
STRA8
SOD1
SLC9C1
PLEKHA8
PDE12
KNL1
FKBP14
TAF12
UNC45B
TPD52L2
SETD1A
ORAI3
NLE1
ABHD16B
UCHL5
RPL26
RO60
PRDM10
KRBA2
GPR89A
AGBL3
SP2
TRIP10
GPR108
FBXO8
CEP44
AFF3
ADK
PMVK
KAT6A
ZSWIM4
WWOX
TRMT2A
TRAF3IP3
SMG6
RER1
RANBP1
RALGPS2
PRMT5
PIK3C2A
MORN1
BARHL1
SSBP2
STK17A
SORBS2
LARP4
HHLA2
FAM186A
TYMP
RUVBL1
ODF3B
KLHDC7B
KLHDC10
DUSP6
SLC35B1
ZNF48
TBC1D10B
MYLPF
RPL37
CARD6
REEP6
PCSK4
MDN1
LAMC1
KRT83
EPS8
DNAJC24
DCDC1
CASP8AP2
BTN3A2
ATF7IP
TSSC4
YPEL5
NAV1
LARS1
ZNFX1
RFX5
MAP1LC3B2
GPR25
BUB1
SYNGAP1
RIC1
PHF1
OPA3
HUS1
CUTA
XYLT1
LOC645177
CD69
CCDC9
C12orf77
PSMD3
OAT
NOTCH1
HMGN4
CLN6
CCAR2
C8orf58
WDR24
TRAPPC2
STUB1
STPG3
OFD1
NELFB
JMJD8
FAM166A
CEACAM21
ATP5MC1
TRUB2
LAX1
ETV5
COQ4
CDK5RAP3
ATG5
QRICH2
ACTR2
MRPL1
TMEM259
RPL15
NKIRAS1
CNN2
USP21
UFC1
TIGIT
H2AC19
H2AC18
DNAJC19
KDM4D
CWC15
ZNF286A
MAB21L3
MTOR
SPON2
ZNF443
RUBCN
PM20D1
NPIPB6
TMCO1
RGS1
PDF
NIP7
COG8
LOC102724770
DGCR6
TNFRSF19
SNX16
COL23A1
ADAMTSL1
CABCOCO1
CLPB
CCDC200
UNK
H3-3B
CDCA3
FEM1A
FAP
H2BC14
H2AC14
EMCN
BOD1
UCKL1
DDX49
COPE
NAV3
PHF12
SLC8A1
RWDD1
NAA80
IFRD2
HYAL3
CHMP4B
VPS50
HEPACAM2
PHRF1
FBXL19
ARHGAP35
AP2S1
PHB
SP1
TCEA2
RAB5B
PMEL
CDK2
TMEM115
NPRL2
CYB561D2
DPH6
RAG2
IFTAP
CIC
SUCLG1
H4C2
H4C1
H3C2
H3C1
H2AC4
H1-1
H2BC4
H2AC6
TESK2
MMACHC
DDX23
MAPKAPK5
ID3
WDPCP
MDH1
ANKHD1-EIF4EBP3
ANKHD1
MRPL24
ARL4D
PAK1IP1
C6orf52
THRAP3
PES1
TMEM242
NEBL
IRF2BP2
PEX14
DFFA
TBL1X
MRPL11
ING4
S1PR4
NCLN
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
SPAAR
HRCT1
CALR3
C19orf44
PRCC
GSPT1
MALL
BANP
ZFYVE1
HDGF
TSNAXIP1
RANBP10
VIPAS39
AHSA1
SMPD3
PEMT
EHF
RPS7
TOM1L2
DRC3
GALM
RPS20
TSC2
NTHL1
OSBP
KRT39
UNKL
TSN
C16orf91
VARS2
GTF2H4
OR4M1
LRRC29
ST3GAL2
PNKD
GPBAR1
AAMP
PNPLA6
INTS9
HMBOX1
ZNF547
TRAPPC2B
HNRNPC
NUP205
TMEM70
ELOC
RPS3
RPL32
SYMPK
FOXA3
PPRC1
LRCH4
FBXO24
INVS
ERP44
ID1
UBQLN4
RAB25
LAMTOR2
ZNF268
ZNF225
MRI1
C19orf53
ORMDL3
GSDMB
SCAF1
RRAS
TXNRD1
BUB1B
POLDIP3
GSK3A
ERF
CACTIN
ZNF143
SUPV3L1
C1orf159
RANBP2
ZNF165
OR1F12
FASTKD1
OR4Q3
PIN4
TMEM262
PSMD11
NUDCD1
SLC35E2B
FAM168A
NFKBIL1
DDX39B
ATP6V1G2
ZNF17
CCDC146
SIRT4
H4C5
H2BC7
H2AC7
TBL3
RPS2
RNF151
NOXO1
TMEM94
NDC80
METTL4
DYNC1I2
ZNF687
ZNF585B
ZNF383
GPR137
GATB
BMP5
SPSB3
NUBP2
MRPS34
EME2
OR4N2
UFD1
CDC45
OAZ3
ZNF335
IL32
ZNF513
SNX17
EIF2B4
ZMYND10
STT3A
HEXB
TFPT
PRPF31
ZSCAN22
ARID2
STAM
VCPIP1
C8orf44-SGK3
ADAMTS9
G3BP1
UBAC1
SIRT2
SCRIB
NFKBIB
UFSP2
C4orf47
BMF
SP5
TM4SF18
RPL36
MICOS13
HSD11B1L
CYCS
TSNAX
MRPS7
MIF4GD
GGA3
SART3
ISCU
SLC39A1
CRTC2
CREB3L4
ART1
TIMM21
FBXO15
PRR5L
COMMD9
RARB
OLFML2A
NR6A1
ZNF608