ChIP-Atlas: Target genes

Potential target genes for HDAC4

Query protein: HDAC4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX13466116 | SK-UT-1
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC4's Target genes

◢ HDAC4: Average

◢ SRX2140208: MM.1S

◢ SRX8213853: SK-LMS-1

◢ SRX11525509: SK-UT-1

◢ SRX11525512: SK-UT-1

◢ SRX13466113: SK-UT-1

◣ SRX13466116: SK-UT-1

◢ SRX6054277: SK-UT-1

◢ HDAC4: STRING

MAMDC2
SPATC1L
DUX4
FRG2C
WDR74
STX5
SP2
TNFRSF19
FEM1A
UCKL1
CDCA3
EAPP
COL23A1
DNM2
CCDC200
PAFAH2
RWDD1
UNK
H3-3B
NAA80
IFRD2
HYAL3
H4C14
H3C15
H3C14
H2AC19
H2AC18
CLPB
LOC102724770
DGCR6
H4C3
H1-6
FRG2
H4C15
BOD1
CHMP4B
LY6L
ARHGAP35
AP2S1
TESK2
MMACHC
SLC25A25
NAIF1
EVI5L
DDX49
COPE
PHB
MRPL11
RFX1
FAP
RAB5B
PMEL
CDK2
FBXL19
EMCN
H4C12
H4C11
H2BC14
H2AC14
TCEA2
PHF12
SLC25A41
KHSRP
PES1
MTRNR2L1
RBBP5
MUC3A
ADAMTSL1
VTI1B
BANP
ANKHD1-EIF4EBP3
ANKHD1
MALL
PHRF1
CIC
PEX14
DFFA
PEMT
SUCLG1
VARS2
GTF2H4
CALR3
C19orf44
MRPL24
HDGF
SLC8A1
RPS7
RAG2
IFTAP
SP1
REXO1
SULT1A4
SULT1A3
SLX1B
SLX1A
BOLA2B
BOLA2
ZNF225
YJU2
FASTKD1
OSBP
TXNRD1
UNKL
C16orf91
POLR3F
DZANK1
SYMPK
FOXA3
SUPV3L1
PNKD
GPBAR1
AAMP
SCRIB
C19orf48
SMPD3
WDPCP
MDH1
NUP205
VPS50
HEPACAM2
TAF12
ING4
CACTIN
PRCC
GSPT1
TMEM115
NPRL2
CYB561D2
CABCOCO1
ID3
AURKAIP1
H2BC4
H2AC6
TSNAXIP1
RANBP10
KRT39
NLK
RNASEH2A
PRDX2
TNFAIP8L2-SCNM1
TNFAIP8L2
TMOD4
SCNM1
LYSMD1
TBL3
RPS2
RNF151
NOXO1
TNFRSF12A
THOC6
HCFC1R1
CLDN6
SLC35B1
NEBL
POLR2E
GPX4
SLC35E2B
PNPLA6
IPO13
INTS9
HMBOX1
RBL1
ZNF547
TRAPPC2B
CAPN15
TOM1L2
DRC3
UBQLN4
RAB25
LAMTOR2
POLDIP3
S1PR4
NCLN
UFSP2
C4orf47
PAK1IP1
C6orf52
HEXB
ZNF165
OR1F12
VCPIP1
C8orf44-SGK3
VIPAS39
AHSA1
ZFYVE1
SSR3
MAPKAPK5
DSTYK
ZNF268
ORMDL3
GSDMB
OAZ3
MRPL21
IGHMBP2
BOLA2-SMG1P6
HNRNPL
PSMD11
ZNF687
RPIA
SEC61B
GALM
SART3
ISCU
TSN
USP48
KAT6B
ZNF585B
ZNF383
STT3A
SCAF1
RRAS
BUB1B
RANBP2
NUP153
TSC2
NTHL1
RPS20
TMEM94
H4C2
H4C1
H3C2
H3C1
H2AC4
H1-1
GDE1
CCP110
THRAP3
ARID5B
UBE2T
PPP1R12B
INVS
ERP44
TFPT
PRPF31
RGS14
LMAN2
ZNF444
CCDC90B
DYNC1I2
ZNF235
MUC20
PCBP1
CCAR2
C8orf58
ZNF576
IRGQ
NAV3
TBL1X
ING3
LRRC29
RPL32
TMEM160
RNF213
PRRG2
NOSIP
MRPS7
MIF4GD
GGA3
NMT1
DCAKD
TSNAX
COPS8
HNRNPC
PARP16
LARS1
IRF2BP2
C1orf159
DDX23
SIRT4
RPL36
MICOS13
HSD11B1L
VEZT
FGD6
NUF2
COMMD1
CCT4
EXOSC5
BCKDHA
GET3
SESN1
CEP57L1
STMN3
RTEL1
CWC25
ZNF143
KRR1
FARSB
RBM42
ZNF691
ZNF335
SYP
PRICKLE3
TMEM70
ELOC
STAM
RPS27A
CLHC1
SPAAR
HRCT1
NDUFS3
KBTBD4
FAM180B
NDUFS7
STAM2
DYNC2I2
STK36
RNF25
UBAC1
SIRT2
NFKBIB
PRORP
PPP2R3C
IER3
FLOT1
MTOR
TRMO
RGS19
OPRL1
LKAAEAR1
FAM118A
PPRC1
LRCH4
FBXO24
SF3A3
ZNF749
PTMA
RNF121
LOC100133315
H4C8
ZNF773
TBCK
AIMP1
MRI1
C19orf53
LSG1
PSMD1
TEPSIN
NDUFAF8
RAB11B
GSK3A
ERF
TACO1
TIMM21
FBXO15
ZBTB45
SLC27A5
PABPN1
KATNB1
ID1
ISY1-RAB43
ISY1
TM4SF18
ZSCAN22
SF3B3
COG4
G3BP1
TEKT2
ADPRS
MTR
GOSR2
RPL9
LIAS
TRAPPC6B
PNN
MTBP
MRPL13
ASXL1
UBE2I
BMERB1
RPGRIP1L
FTO
TINF2
NEDD8-MDP1
NEDD8
GMPR2
SLC25A19
JOSD2
ASPDH
OLFML2A
NR6A1
NDUFB3
FAM126B
PSMC5
FTSJ3
AP2M1
UQCRC2
OR4N2
SHC1
FLAD1
CKS1B
CCDC174
TM9SF4
H3C4
H4C5
H2BC7
H2AC7
TCF3
FAM187A
EFTUD2
CCDC103
SLC39A9
ERH
SF3B5
RPS3
NFKBIL1
DDX39B
ATP6V1G2
TMEM107
PPP6R1
RABAC1
SSU72
HDAC9
BMP5
UFD1
CDC45
ZMYND10
HEXIM2
ADO
UTP11
FHL3
WBP1
INO80B
EPHB4
SREK1IP1
CWC27
USP17L22
USP17L21
USP17L20
USP17L12
HNRNPUL1
TMEM60
PHTF2
ZNF140
CHPF2
ABCF2-H2BE1
ABCF2
HSPA9
XPNPEP3
ST13
DNAJB7
NKX1-1
NDC80
METTL4
VAMP2
PER1
TATDN3
NSL1
VPS52
RPS18
B3GALT4
PIN4
UBE2M
CHMP2A
U2SURP
TSSC4
KDM6B
SNX16
CNPY2
SPSB3
NUBP2
MRPS34
EME2
CTDP1
HBP1
SFR1
ART1
WDR46
RGL2
PFDN6
ZSCAN5A
KIF2C
MRPL53
MOGS
SUGP1
MAU2
EHF
SNRPB
TXNDC2
COMMD2
PARP2
CCNB1IP1
VIPR2
PSMB5
PSMB11
TRIM55
PI4KB
MRPS11
MRPL46
MTRNR2L2
MSH3
DHFR
MTRNR2L8
KIF5C
DPH6
ARL4D
TMEM242
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
H2BC15
H2AC15
OR4M1
ST3GAL2
TARS2
TP53I3
SF3B6
FAM228B
OR4Q3
TMEM262
NUDCD1
FAM168A
ZNF17
CCDC146
GPR137
GATB
RGPD2
RGPD1
PROSER3
LIN37
HSPB6
TRIP10
GPR108
PRR14
FBRS
IL32
ZNF513
SNX17
EIF2B4
UTP3
TXNDC5
ARID2
ADAMTS9
MTRNR2L9
BMF
SP5
FRMPD4
CYCS
GBA
SLC39A1
CRTC2
CREB3L4
PRR5L
COMMD9
RARB
ZNF608
STIP1
NUDT13
NUP107
AK2
TMEM11
WT1
COX16
TIPARP
RXFP4
KHDC4
EIF2AK3
ZBTB38
ZNF417
TBL1XR1
PSPN
ALKBH7
KIAA0895L
EXOC3L1
ELMO3
E2F4
PTPN6
SUFU
ACTR1A
PIGL
NCOR1
MEIS1
UBR2
DOK3
DDX41
TULP2
NUCB1
NFIB
KBTBD6
CNIH4
ARHGEF9
PANK4
MED27
HES5
SPHK2
RPL18
FAM83E
TRDMT1
ANAPC5
SUPT7L
SLC4A1AP
METTL3
OST4
KHK
EMILIN1
SRSF11
LRRC40
SLX4IP
MKKS
BAHCC1
TMTC3
CEP290
SEC11C
INTS1
TTI2
EIF3F
PSENEN
IGFLR1
SNAP25
SMG8
NME1
SSBP1
ZSWIM3
ACOT8
PWWP2A
PHB2
AHCYL2
NPAS4
MTRNR2L10
BAZ2A
ATP5F1B
LMNB2
SAMD1
MISP3
EMILIN2
C19orf67
ZNF337
BCL3
COX7C
WFIKKN1
METTL26
MCRIP2
VMO1
PSMB6
GLTPD2
CDK5RAP2
TCERG1
VWA5A
GTF3C3
C2orf66
ZFPL1
CDCA5
ZNF48
TBC1D10B
MYLPF
HMX2
BUB3
PCM1
KRT19
KRT15
ZNF548
SMAD3
PTPRH
MRPL28
CLN3
APOBR
ATG4C
ARL4C
RPS6KB2
PTPRCAP
ATP6V1G1
ZMAT2
HARS2
HARS1
MRPL30
MITD1
CAND1
NOC4L
DDX51
BCL2L1
NPIPA1
SEL1L
C12orf43
ANKRD28
EMP3
NDUFAF5
ESF1
BABAM1
RHOT2
RHBDL1
CCNL1
EMC4
TRAF7
RAB26
ZC3H10
SMARCD2
RPL41
DHX8
CTU1
CCDC124
PDE4DIP
KRT23
EXD2
SLC25A20
UBC
PHF19
FNDC3A
ZNF500
SEC13
RPL18A
ZNF776
EXOC4
GSTO2
WNK4
VPS25
SMARCAL1
PPP1R12C
SRD5A1
NSUN2
SSBP2
TRIP4
PCLAF
PPP5D1
GUF1
CALM3
NOP16
HIGD2A
CD79A
ARHGEF1
DLGAP1
PLA2G4A
ZFYVE19
DNAJC17
C5orf38
ATP5MG
SNX1
CIAO2A
CD2BP2
CRADD
TOP2A
MTRF1
FBH1
EPS15
IARS2
BPNT1
RCAN1
PDE6D
FBXW11
COPS7B
ZNF211
RPL37
CARD6
CCL3
COPS7A
TARBP1
SYT7
TLE3
ZCCHC4
MT2A
SRCIN1
RPAIN
NUP88
GRAMD2B
CENPA
ZAR1
TBP
SSBP3
PSMB1
ZNF286A
PEX2
INO80C
FCF1
AREL1
STK25
ABT1
SH3RF2
H4C4
H2BC6
USP30
HEATR5B
GPATCH11
ZNF688
CSDE1
WDR97
MAF1
CYC1
UVRAG
DMAC1
ZNF628
USP22
NAT14
TMEM109
PRPF19
BRWD1
AP1G1
ANGPTL2
ZCCHC8
RPL35A
IQCG
GLIPR1L1
CAPS2
RPL27
IFI35
TRAPPC9
SHPK
PTEN
KLLN
CTNS
ZC3H12A
NDUFB5
MRPL47
PLA2G15
TOR1AIP2
TOR1AIP1
SULT2B1
INTS10
MATR3
UBE2J1
PNISR
MRPS23
PITX3
HEMK1
GBF1
C3orf18
GTF2I
RPL14
SNAPC1
MYOM2
GABPB2
XAB2
STXBP2
PCP2
PMF1-BGLAP
PMF1
GORAB
VRK1
ARHGAP17
TJP3
NR1H3
ACP2
FCRL5
SIX1
NTMT1
C9orf50
TBC1D17
PNKP
AKT1S1
CDCA8
C1orf109
ARHGEF2
THAP11
NVL
RAD52
TMEM63C
HMOX1
ENPP4
CLIC5
CCDC138
LTA4H
KLHL29
ASAH2
TXNL4B
THYN1
STAT1
IRAG1
DHX38
ACAD8
TOMM40L
PEX3
DENND1B
DBP
CA11
APOA2
ALKBH3
ADAT2
KCTD5
B4GALT3
KLF2
RMDN2
PTDSS2
ATP2C1
ANO9
STX16
TPRKB
KLF6
FUT10
TIMMDC1
THRA
CCDC110
TRAPPC3
MAP7D1
ZBTB5
HEXA
MRPS18C
HELQ
RAP2B
TXNDC11
C1orf198
NGB
GCLC
LNPEP
MDM2
IFNGR2
TSPO
MCAT
ATF4
SCT
DRD4
CDHR5
ACTL6A
ZNF56
RUFY3
RTRAF
RTF2
PEX26
ESYT1
COX7A2L
GUCY2D
PEAK1
HMG20A
FAM177B
CXCR5
CCL5
CCDC39
TOM1
TMEM256
PLSCR3
NLGN2
TTC33
TGIF1
CYTH3
MDM4
SMCO1
ZPBP2
IKZF3
NLRP3
NCOA7
MNT
AIM2
NPR1
ILF2
IL17A
RBM25
RASAL2
NDUFC2-KCTD14
NDUFC2
NAT16
HCAR3
CHST12
RIIAD1
MAP2K3
IRF2BPL
CELF3
SNX15
HDAC7
ANP32C
KMT2C
GLDN
EML2
DPP9
CRYBB1
BTRC
ZNF226
LTN1
POLG
LAMP1
FGG
CRYAA2
CRYAA
RGS8
MACC1
DHX33
ZNF384
SKA2
PRR11
PHC2
KANSL3
ID2
FER1L5
TJP1
MRPL20
MRPL1
MAPK11
DCP1B
COG3
CCNL2
UBE2H
DRAP1
DAGLB
C11orf68
PXMP2
POLE
LOC102723996
ICOSLG
USP3
SUPT4H1
MNX1
ZNF639
CCM2
CBWD5
TUBG1
RPS13
RETREG3
LAS1L
HSD11B1