ChIP-Atlas: Target genes

Potential target genes for HDAC4

Query protein: HDAC4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX13466113 | SK-UT-1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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HDAC4's Target genes

◢ HDAC4: Average

◢ SRX2140208: MM.1S

◢ SRX8213853: SK-LMS-1

◢ SRX11525509: SK-UT-1

◢ SRX11525512: SK-UT-1

◣ SRX13466113: SK-UT-1

◢ SRX13466116: SK-UT-1

◢ SRX6054277: SK-UT-1

◢ HDAC4: STRING

MAMDC2
DUX4
SPATC1L
FRG2C
WDR74
STX5
ADAMTSL1
CABCOCO1
TNFRSF19
MTRNR2L1
SP2
CDCA3
DPH6
EVI5L
EMCN
FAP
NAV3
UNK
H3-3B
UCKL1
CCDC200
LOC102724770
DGCR6
SLC8A1
DNM2
COL23A1
CLPB
H4C3
H1-6
VPS50
HEPACAM2
ID3
H4C12
H4C11
H2BC14
H2AC14
DDX49
COPE
NAA80
IFRD2
HYAL3
FEM1A
KATNB1
OR4M1
BOD1
RFX1
PHF12
NEBL
H4C14
H3C15
H3C14
H2AC19
H2AC18
FRG2
IRF2BP2
EHF
ARL4D
H4C15
RBBP5
SUCLG1
FBXL19
ARID5B
THRAP3
TMEM115
NPRL2
CYB561D2
ID1
RAB5B
PMEL
CDK2
ARHGAP35
AP2S1
ING4
MALL
H4C2
H4C1
H3C2
H3C1
H2AC4
H1-1
EAPP
SP1
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
TEPSIN
NDUFAF8
TCEA2
UBE2T
PPP1R12B
RWDD1
RAG2
IFTAP
MAPKAPK5
GALM
CHMP4B
POLR3F
DZANK1
TBL1X
WDPCP
MDH1
YJU2
PES1
PEX14
DFFA
PAFAH2
OR4Q3
SLC25A41
KHSRP
TNFAIP8L2-SCNM1
TNFAIP8L2
TMOD4
SCNM1
LYSMD1
PRCC
SULT1A4
SULT1A3
SLX1B
SLX1A
BOLA2B
BOLA2
CALR3
C19orf44
SLC39A1
CRTC2
CREB3L4
TESK2
MMACHC
PAK1IP1
C6orf52
TSN
NUDCD1
MRPL11
CIC
TSC2
NTHL1
TP53I3
SF3B6
FAM228B
MTOR
TMEM70
ELOC
GSPT1
ZNF547
TRAPPC2B
CCAR2
C8orf58
PHB
SUPV3L1
H2BC4
H2AC6
NUP205
SLC25A25
NAIF1
S1PR4
NCLN
TSNAXIP1
RANBP10
SMPD3
POLDIP3
DDX23
C1orf159
KRT39
ANKHD1-EIF4EBP3
ANKHD1
SP5
AURKAIP1
RPL32
RNASEH2A
PRDX2
TRIP10
GPR108
PHRF1
TXNRD1
RARB
UNKL
C16orf91
ZFYVE1
ST3GAL2
MEIS1
UBQLN4
RAB25
LAMTOR2
ZNF513
SNX17
EIF2B4
BOLA2-SMG1P6
TRDMT1
RPS20
NFIB
MUC3A
BMF
SART3
ISCU
MRPL24
HDGF
VIPAS39
AHSA1
BANP
TSSC4
GSK3A
ERF
LRCH4
FBXO24
TOM1L2
DRC3
LRRC29
ORMDL3
GSDMB
ZNF17
SYMPK
FOXA3
OR4N2
ZNF608
VCPIP1
C8orf44-SGK3
BMP5
SPAAR
HRCT1
BUB1B
GPR137
NUP107
CYCS
INVS
ERP44
KBTBD6
LSG1
PARP16
SIRT4
VARS2
GTF2H4
HNRNPC
TMEM262
G3BP1
TBL1XR1
KIAA0895L
EXOC3L1
ELMO3
E2F4
BCL3
WT1
OSBP
STAM
UFSP2
C4orf47
METTL3
ZMYND10
SEC11C
H2BC15
H2AC15
SNX16
ZNF225
NLK
CCDC146
OLFML2A
NR6A1
RXFP4
KHDC4
SIRT2
NFKBIB
EIF2AK3
PNKD
GPBAR1
AAMP
TMEM11
PPRC1
PRR14
FBRS
KIF2C
ZNF548
ZNF691
PEMT
RPS7
TAF12
TMEM107
LARS1
RPS3
NFKBIL1
DDX39B
ATP6V1G2
SRD5A1
NSUN2
ZNF585B
ZNF383
TMTC3
CEP290
SUFU
ACTR1A
CNIH4
SUPT7L
SLC4A1AP
CDK5RAP2
RPL36
MICOS13
HSD11B1L
CLN3
APOBR
THRA
TRMO
TRAF7
RAB26
TULP2
NUCB1
MRPL53
MOGS
DSTYK
MTRNR2L2
MSH3
DHFR
PRR5L
COMMD9
TM4SF18
RPIA
EMP3
ISY1-RAB43
ISY1
EXOC4
ZNF268
CACTIN
UBR2
SPSB3
NUBP2
MRPS34
EME2
TIMM21
FBXO15
STT3A
RGS14
LMAN2
SAMD1
MISP3
C19orf67
TSPO
MCAT
PIN4
ARID2
NUF2
BAZ2A
ATP5F1B
SCAF1
RRAS
ZNF56
RTRAF
RTF2
ZC3H10
RPL41
ESYT1
NDUFS3
KBTBD4
FAM180B
OAZ3
WDR46
RGL2
PFDN6
BAHCC1
UBE2I
TFPT
PRPF31
SLX4IP
MKKS
SNAP25
PEAK1
HMG20A
DOK3
DDX41
AK2
CCDC90B
COMMD1
CCT4
COX16
TTC33
TGIF1
EXD2
MTRNR2L8
GATB
INTS9
HMBOX1
SSR3
UBC
TRAPPC6B
PNN
ING3
SHC1
FLAD1
CKS1B
ZNF417
ZNF576
IRGQ
FAM187A
EFTUD2
CCDC103
ZSWIM3
ACOT8
NDUFC2-KCTD14
NDUFC2
VTI1B
NVL
RIIAD1
MAP2K3
IRF2BPL
CELF3
VWA5A
TARS2
KRT23
ZNF143
FASTKD1
HNRNPL
UFD1
CDC45
MED27
PHB2
ZNF337
BTRC
TMEM94
NME1
CCDC124
SLC35B1
FAM168A
GTF3C3
C2orf66
SEL1L
ZNF500
ZNF776
LAMP1
TMEM160
HEXIM2
BCL2L1
AP1G1
DHX33
RPL27
IFI35
ZNF384
ZMAT2
HARS2
HARS1
RBL1
ID2
DCP1B
KRT19
KRT15
NDUFB3
FAM126B
GRAMD2B
SLC25A19
TTI2
TCERG1
PXMP2
POLE
NUDT13
VMO1
PSMB6
GLTPD2
TMEM60
PHTF2
SPHK2
RPL18
FAM83E
GDE1
CCP110
PSMD11
TSNAX
TXNDC2
RPS13
SNX1
CIAO2A
RANBP2
FARSB
ANAPC5
COX7C
TRIP4
PCLAF
JOSD2
ASPDH
MRI1
C19orf53
PROSER3
LIN37
HSPB6
PSENEN
IGFLR1
RPS27A
CLHC1
RABAC1
ZSCAN5A
SCRIB
RNF121
LOC100133315
GBA
HMX2
BUB3
MRPL28
TMEM79
SMG5
MARS1
ARHGAP9
ZNF444
OST4
KHK
EMILIN1
ZNF48
TBC1D10B
MYLPF
SEC13
DLGAP1
TMEM242
H3C4
H4C5
H2BC7
H2AC7
WFIKKN1
METTL26
MCRIP2
ARL4C
USP17L22
USP17L21
USP17L20
USP17L12
GABPB2
RPS23
ATP6AP1L
TBL3
RPS2
RNF151
NOXO1
WDR83OS
WDR83
PKLR
MAN2B1
FDPS
SLC35E2B
NDC80
METTL4
PRORP
PPP2R3C
TM9SF4
TRIM55
MRPL44
C12orf43
TARBP1
ZNF565
ZNF146
TMEM143
SYNGR4
FAM156B
FAM156A
ZNF687
ZNF335
SRSF11
LRRC40
EIF3F
RPS6KB2
PTPRCAP
ZNF552
GEMIN6
DYNC1I2
EXOSC5
BCKDHA
NFATC2IP
SPC25
FOS
GOSR2
LMNB2
SAP30BP
RECQL5
HDAC9
SUGP1
MAU2
PNPLA6
PIGL
NCOR1
REXO1
ZC3H6
NCDN
KIAA0319L
EIF4A1
CDK8
CD68
UBAC1
ART1
IPO13
CTU1
ZNF584
RPL29
PHF23
GABARAP
DVL2
STIP1
TPRKB
WBP2
RANGAP1
MAMSTR
FOXP2
MRPL30
MITD1
HSPA9
ZNF419
PRRG2
NOSIP
PANK4
HES5
ATG4C
SART1
ZNF165
OR1F12
MED6
CCDC174
CGGBP1
C3orf38
ATXN2L
PEX2
SMAD3
STK36
RNF25
TMEM109
PRPF19
IFI44L
ZNF235
CAND1
GET3
SREK1IP1
CWC27
PEX26
MPV17L2
CSTF1
AURKA
AHCYL2
ELP5
CTDNEP1
ZSCAN22
MRPS7
MIF4GD
GGA3
RAB11B
ZBTB45
SLC27A5
CD2BP2
PCBP1
CDCA8
C1orf109
TMCO6
NDUFA2
IK
C19orf48
SLMAP
GNG14
FBXW9
FBXW11
SULT2B1
NDUFAB1
HIRIP3
CPA2
SEC61B
CTDP1
RPL18A
ZNF688
PNISR
TAF6
MBLAC1
IDH3B
CNPY4
ASB4
PSPN
ALKBH7
ATG9B
ABCB8
DHX8
NR1H3
ACP2
PPIL3
NIF3L1
IER5L
USP30
RPS12
SMG8
RPL9
LIAS
BMERB1
RPL21
NMNAT1
LZIC
HEXB
SH3RF2
MYEOV
CEP128
AMOTL2
SSBP1
SF3B3
COG4
UTP11
FHL3
UBQLN1
NDUFAF5
ESF1
ZNRF3
SACS
CWC22
TMED10
SPEG
NXNL2
GFM2
SYP
PRICKLE3
SESN1
CEP57L1
GORAB
GCG
CENPA
RFC4
PTBP1
KRI1
CDKN2D
ZBTB12
KMT2B
EHMT2
DPH2
DEXI
CLEC16A
C2
B4GALT2
ATP6V0B
KRR1
NMT1
DCAKD
WNK4
VPS25
SLC39A9
ERH
SPNS1
NGDN
LAT
ZFPL1
CDCA5
AP5S1
COPS7A
HBP1
PTCD3
POLR1A
C10orf143
UTP3
PPP1R12C
TDG
NOLC1
C12orf73
RPS26
NUP214
GTF2IRD1
XPNPEP3
ST13
DNAJB7
ZNF112
TPGS1
PRKCI
HMGA2
BCAS2
RNF187
PTPN6
CRADD
USP17L18
USP17L13
USP17L11
USP17L10
C12orf57
SPAG7
RBM6
N4BP2L2
MON1A
GTPBP3
B4GALT5
ANO8
NTMT1
C9orf50
DARS2
CENPL
EMC4
LTA4H
ZFP36L1
SLC4A2
RPA2
CREM
CDK5
ASIC3
TACO1
ZNF76
TIMM13
NOP53
CHD8
PPP6R1
UQCRH
MBD1
LRRC41
FERD3L
CXXC1
RPGRIP1L
FTO
PTPRH
MT2A
RNF5
AGPAT1
AGER
SNRPB
WASF1
HEXIM1
CDC40
MRPS23
CNOT1
BABAM1
GPKOW
CSTF2T
EIF2S3
GSTO2
ZRANB2
ZMYND15
RHBDD3
NRL
MED11
GPATCH1
EWSR1
DCAF11
CXCL16
SMARCAL1
TLE3
PPP1R9B
HSPA1B
PARP2
CCNB1IP1
EIF1AD
CST6
BANF1
ZNF221
OXSR1
H2BC21
H2AC21
H2AC20
IRAG1
ZBTB5
RBM39
MRPL1
ZNF514
ZNF2
SNRPE
SERP1
EIF2A
IER3
FLOT1
PPWD1
NRDE2
MRM3
GLOD4
GID4
CENPK
ATPAF2
CAPN15
THYN1
ACAD8
KCNJ14
GRWD1
TTC31
CWF19L1
CCDC33
CCDC142
PITX3
GBF1
ADO
ZMAT5
UQCR10
RACGAP1
PHF5A
ACO2
C6orf47
BAG6
APOM
POLG2
ICE1
DDX5
CEP95
STAM2
MED20
BYSL
PABPN1
WDR97
MAF1
CYC1
PAN2
IL23A
VPS52
RPS18
B3GALT4
TXNL4B
DHX38
ZDHHC5
CLP1
TMEM63C
PAF1
MED29
RPF1
SLC25A42
MOCS3
DPM1
SOX15
MPDU1
LOC100996842
KIF5C
LY6L
SF3A3
RGPD2
RGPD1
IL32
TXNDC5
ADAMTS9
MTRNR2L9
FRMPD4
TNFRSF12A
THOC6
HCFC1R1
CLDN6
TIPARP
ZBTB38
ARHGEF9
INTS1
PSMC5
FTSJ3
VEZT
FGD6
MRPL21
IGHMBP2
PWWP2A
NPAS4
MTRNR2L10
NDUFS7
EMILIN2
TATDN3
NSL1
PCM1
TINF2
NEDD8-MDP1
NEDD8
GMPR2
H4C8
ATP6V1G1
NOC4L
DDX51
NPIPA1
POLR2E
GPX4
ANKRD28
RHOT2
RHBDL1
CCNL1
SMARCD2
HNRNPUL1
PDE4DIP
SLC25A20
PHF19
FNDC3A
SSBP2
PPP5D1
GUF1
CALM3
ZNF773
NOP16
HIGD2A
CD79A
ARHGEF1
ZNF140
PLA2G4A
ZFYVE19
RGS19
OPRL1
LKAAEAR1
DNAJC17
C5orf38
ATP5MG
AP2M1
TOP2A
MTRF1
FBH1
EPS15
IARS2
BPNT1
RCAN1
PDE6D
COPS7B
ZNF211
RPL37
CARD6
DYNC2I2
CCL3
SYT7
ZCCHC4
SRCIN1
RPAIN
NUP88
ZAR1
TBP
SSBP3