ChIP-Atlas: Target genes

Potential target genes for HDAC4

Query protein: HDAC4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: HDAC4 | STRING
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC4's Target genes

◢ HDAC4: Average

◢ SRX2140208: MM.1S

◢ SRX8213853: SK-LMS-1

◢ SRX11525509: SK-UT-1

◢ SRX11525512: SK-UT-1

◢ SRX13466113: SK-UT-1

◢ SRX13466116: SK-UT-1

◢ SRX6054277: SK-UT-1

◣ HDAC4: STRING

CLDN2
MAMDC2
WDR74
STX5
DUX4
MTRNR2L1
SPATC1L
MTRNR2L2
MSH3
DHFR
FRG2C
LOC102724770
DGCR6
MTRNR2L8
SP2
TNFRSF19
SNX16
COL23A1
ADAMTSL1
KIF5C
FRG2
CABCOCO1
DNM2
H4C3
H1-6
EVI5L
EAPP
H4C12
H4C11
MUC3A
CLPB
CCDC200
UNK
H3-3B
CDCA3
H4C14
H3C15
H3C14
FEM1A
FAP
H2BC14
H2AC14
H4C15
EMCN
RFX1
BOD1
UCKL1
H2AC19
H2AC18
DDX49
COPE
PAFAH2
NAV3
PHF12
SLC8A1
RWDD1
NAA80
IFRD2
HYAL3
CHMP4B
KATNB1
VPS50
HEPACAM2
PHRF1
RBBP5
POLR3F
DZANK1
FBXL19
ARHGAP35
AP2S1
SLC25A41
KHSRP
PHB
SP1
TCEA2
RAB5B
PMEL
CDK2
TMEM115
NPRL2
CYB561D2
DPH6
RAG2
IFTAP
TNFAIP8L2-SCNM1
TNFAIP8L2
TMOD4
SCNM1
LYSMD1
SLC25A25
NAIF1
CIC
SUCLG1
ARID5B
H4C2
H4C1
H3C2
H3C1
H2AC4
H1-1
H2BC4
H2AC6
TESK2
MMACHC
DDX23
MAPKAPK5
TEPSIN
NDUFAF8
SULT1A4
SULT1A3
SLX1B
SLX1A
BOLA2B
BOLA2
ID3
WDPCP
MDH1
UBE2T
PPP1R12B
ANKHD1-EIF4EBP3
ANKHD1
YJU2
MRPL24
ARL4D
PAK1IP1
C6orf52
THRAP3
PES1
TMEM242
NEBL
IRF2BP2
BOLA2-SMG1P6
PEX14
DFFA
TBL1X
MRPL11
ING4
S1PR4
NCLN
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
SPAAR
HRCT1
LY6L
CALR3
C19orf44
PRCC
GSPT1
MALL
BANP
ZFYVE1
CCDC90B
HDGF
TSNAXIP1
RANBP10
VIPAS39
AHSA1
SMPD3
PEMT
EHF
RPS7
TOM1L2
DRC3
HDAC9
H2BC15
H2AC15
AURKAIP1
GALM
TAF12
RPS20
TSC2
NTHL1
OSBP
KRT39
UNKL
TSN
C16orf91
VARS2
GTF2H4
OR4M1
MTOR
LRRC29
ST3GAL2
PNKD
GPBAR1
AAMP
PNPLA6
INTS9
HMBOX1
ZNF547
TRAPPC2B
HNRNPC
H3C4
NUP205
TMEM70
PARP16
NDUFS3
KBTBD4
FAM180B
ELOC
TARS2
RPS3
RPL32
SYMPK
FOXA3
PPRC1
LRCH4
FBXO24
INVS
ERP44
TP53I3
SF3B6
FAM228B
NLK
ID1
CCAR2
C8orf58
UBQLN4
RAB25
LAMTOR2
ZNF268
ZNF225
MRI1
C19orf53
NUF2
ORMDL3
GSDMB
LARS1
SCAF1
RRAS
TXNRD1
BUB1B
TSSC4
POLDIP3
COMMD1
CCT4
GSK3A
ERF
SLC35B1
CACTIN
LSG1
ZNF143
TACO1
SUPV3L1
C1orf159
RANBP2
ZNF165
SF3A3
OR1F12
FASTKD1
OR4Q3
PIN4
TMEM262
PSMD11
NUDCD1
PRRG2
NOSIP
SLC35E2B
FAM168A
NFKBIL1
DDX39B
ATP6V1G2
ZNF17
CCDC146
SIRT4
H4C5
H2BC7
H2AC7
TBL3
RPS2
RNF151
NOXO1
TMEM94
NDC80
METTL4
DYNC1I2
ZNF687
ZNF585B
ZNF383
GPR137
GATB
TMEM107
RGPD2
RGPD1
BMP5
SSR3
SPSB3
NUBP2
MRPS34
EME2
OR4N2
UFD1
CDC45
OAZ3
PROSER3
LIN37
HSPB6
TRIP10
GPR108
PRR14
FBRS
ZNF335
IL32
ZNF513
SNX17
EIF2B4
ZMYND10
STT3A
UTP3
HEXB
TFPT
PRPF31
ZSCAN22
TXNDC5
ARID2
STAM
VCPIP1
C8orf44-SGK3
ADAMTS9
G3BP1
UBAC1
SIRT2
SCRIB
NFKBIB
UFSP2
C4orf47
MTRNR2L9
BMF
SP5
TM4SF18
RPL36
MICOS13
HSD11B1L
FRMPD4
CYCS
GBA
TSNAX
MRPS7
MIF4GD
GGA3
SART3
ISCU
SLC39A1
CRTC2
CREB3L4
ART1
TIMM21
FBXO15
PRR5L
COMMD9
RARB
OLFML2A
NR6A1
SHC1
FLAD1
CKS1B
KRR1
ZNF608
STIP1
NUDT13
RNASEH2A
PRDX2
NUP107
TNFRSF12A
THOC6
HCFC1R1
CLDN6
AK2
TMEM60
PHTF2
KIF2C
TMEM11
WT1
VTI1B
COX16
TIPARP
RXFP4
KHDC4
RPIA
ZNF691
RGS14
LMAN2
EIF2AK3
CCDC174
ZBTB38
ZNF417
TBL1XR1
MRPL53
MOGS
WDR46
RGL2
PFDN6
ZNF235
PSPN
ALKBH7
KIAA0895L
EXOC3L1
ELMO3
E2F4
ZNF444
PTPN6
DSTYK
SUFU
ACTR1A
PIGL
NCOR1
MEIS1
FARSB
UBR2
DOK3
DDX41
TULP2
NUCB1
NFIB
KBTBD6
CNIH4
ARHGEF9
PANK4
MED27
HES5
GOSR2
SPHK2
RPL18
FAM83E
TRDMT1
EXOSC5
BCKDHA
ANAPC5
SUPT7L
SLC4A1AP
METTL3
OST4
KHK
FAM187A
EMILIN1
EFTUD2
CCDC103
SRSF11
LRRC40
SLX4IP
MKKS
BAHCC1
TMTC3
REXO1
CEP290
SEC11C
INTS1
PSMC5
FTSJ3
ISY1-RAB43
ISY1
VEZT
FGD6
TTI2
HEXIM2
EIF3F
NMT1
DCAKD
PSENEN
IGFLR1
SNAP25
SMG8
MRPL21
IGHMBP2
NME1
RAB11B
SSBP1
C19orf48
ZSWIM3
ACOT8
PWWP2A
PHB2
AHCYL2
HNRNPL
TXNDC2
GDE1
CCP110
NPAS4
RNF121
MTRNR2L10
LOC100133315
BAZ2A
ATP5F1B
LMNB2
SAMD1
NDUFS7
MISP3
EMILIN2
C19orf67
ZNF337
SYP
PRICKLE3
BCL3
ING3
COX7C
TATDN3
NSL1
RPGRIP1L
FTO
WFIKKN1
METTL26
MCRIP2
VMO1
PSMB6
GLTPD2
CDK5RAP2
SEC61B
SUGP1
MAU2
TCERG1
VWA5A
GTF3C3
C2orf66
ZFPL1
CDCA5
UBE2I
ZNF576
IRGQ
ZNF48
TBC1D10B
MYLPF
HMX2
BUB3
PCM1
KRT19
KRT15
ZNF548
TINF2
NEDD8-MDP1
NEDD8
IPO13
GMPR2
RPS27A
H4C8
CLHC1
SMAD3
PTPRH
MRPL28
CLN3
APOBR
ATG4C
ARL4C
RPS6KB2
PTPRCAP
ATP6V1G1
ZMAT2
HARS2
HARS1
ZBTB45
SLC27A5
MRPL30
MITD1
CAND1
NOC4L
DDX51
BCL2L1
NPIPA1
SEL1L
POLR2E
GPX4
C12orf43
ANKRD28
EMP3
NDUFAF5
ESF1
BABAM1
RHOT2
RHBDL1
CCNL1
EMC4
USP17L22
USP17L21
USP17L20
USP17L12
TRAF7
RAB26
ZC3H10
SMARCD2
RPL41
DHX8
CTU1
CCDC124
HNRNPUL1
PDE4DIP
KRT23
EXD2
CAPN15
SLC25A20
UBC
CTDP1
RPL9
RBL1
LIAS
STK36
RNF25
PHF19
FNDC3A
ZNF500
SEC13
RPL18A
ZNF776
EXOC4
GSTO2
WNK4
VPS25
SMARCAL1
PPP1R12C
TRMO
PABPN1
SRD5A1
NSUN2
SSBP2
TRIP4
PCLAF
PPP6R1
PPP5D1
GUF1
CALM3
ZNF773
NOP16
HIGD2A
CD79A
ARHGEF1
DLGAP1
ZNF140
PLA2G4A
ZFYVE19
RGS19
OPRL1
LKAAEAR1
DNAJC17
C5orf38
TMEM160
ATP5MG
SNX1
CIAO2A
CD2BP2
CRADD
AP2M1
TOP2A
MTRF1
FBH1
EPS15
STAM2
IARS2
BPNT1
RCAN1
PDE6D
FBXW11
COPS7B
TRAPPC6B
PNN
ZNF211
RPL37
CARD6
DYNC2I2
CCL3
COPS7A
TARBP1
SYT7
TLE3
ZCCHC4
SLC39A9
PCBP1
MT2A
ERH
SRCIN1
RPAIN
PRORP
PPP2R3C
NUP88
GRAMD2B
CENPA
ZAR1
TBP
SSBP3
PSMB1
ZNF286A
PEX2
INO80C
GET3
FCF1
AREL1
STK25
SLC25A19
NDUFB3
FAM126B
ABT1
SH3RF2
H4C4
H2BC6
USP30
HEATR5B
GPATCH11
ZNF688
JOSD2
CSDE1
ASPDH
WDR97
MAF1
CYC1
UVRAG
DMAC1
ZNF628
USP22
NAT14
TMEM109
PRPF19
BRWD1
SESN1
CEP57L1
AP1G1
USP48
ANGPTL2
ZCCHC8
TM9SF4
RPL35A
IQCG
RABAC1
GLIPR1L1
CAPS2
RPL27
IFI35
TRAPPC9
SHPK
PTEN
KLLN
CTNS
ZC3H12A
NDUFB5
MRPL47
PLA2G15
TOR1AIP2
TOR1AIP1
SULT2B1
INTS10
MATR3
UBE2J1
PNISR
MRPS23
PITX3
HEMK1
GBF1
C3orf18
SF3B3
COG4
GTF2I
RPL14
SNAPC1
MYOM2
GABPB2
XAB2
STXBP2
PCP2
BMERB1
PMF1-BGLAP
PMF1
GORAB
VRK1
ARHGAP17
TJP3
NR1H3
HSPA9
ACP2
FCRL5
SREK1IP1
CWC27
ZSCAN5A
SIX1
NTMT1
C9orf50
TBC1D17
PNKP
AKT1S1
COMMD2
CDCA8
C1orf109
ARHGEF2
THAP11
NVL
RAD52
IER3
FLOT1
TMEM63C
UTP11
HMOX1
FHL3
ENPP4
CLIC5
CCDC138
LTA4H
KLHL29
ASAH2
TXNL4B
THYN1
STAT1
IRAG1
DHX38
ACAD8
TOMM40L
PEX3
DENND1B
DBP
CA11
APOA2
ALKBH3
ADAT2
KCTD5
B4GALT3
KLF2
RMDN2
TRIM55
PTDSS2
ATP2C1
ANO9
STX16
TPRKB
XPNPEP3
ST13
KLF6
FUT10
DNAJB7
TIMMDC1
THRA
CCDC110
TEKT2
ADPRS
TRAPPC3
MAP7D1
ZBTB5
HEXA
MRPS18C
HELQ
RAP2B
HBP1
TXNDC11
C1orf198
NGB
GCLC
LNPEP
MDM2
IFNGR2
TSPO
MCAT
CHPF2
ATF4
ABCF2-H2BE1
ABCF2
ADO
SCT
DRD4
CDHR5
ACTL6A
ZNF56
RUFY3
RTRAF
RTF2
PEX26
ESYT1
COX7A2L
GUCY2D
PEAK1
HMG20A
FAM177B
CXCR5
CCL5
CCDC39
TOM1
TMEM256
PLSCR3
NLGN2
TTC33
TGIF1
CYTH3
MDM4
SMCO1
ZPBP2
IKZF3
NLRP3
NCOA7
MNT
KAT6B
AIM2
SNRPB
VPS52
RPS18
NPR1
ILF2
IL17A
B3GALT4
NUP153
RBM25
RASAL2
NDUFC2-KCTD14
NDUFC2
NAT16
HCAR3
CHST12
RIIAD1
MAP2K3
KDM6B
IRF2BPL
CELF3
SNX15
HDAC7
ANP32C
KMT2C
GLDN
EML2
DPP9
CRYBB1
BTRC
ZNF226
LTN1
POLG
PARP2
LAMP1
CCNB1IP1
FGG
CRYAA2
CRYAA
RGS8
MUC20
MACC1
DHX33
ZNF384
SKA2
PRR11
PHC2
KANSL3
ID2
FER1L5
TJP1
MRPL20
MRPL1
MAPK11
DCP1B
COG3
CCNL2
UBE2H
DRAP1
DAGLB
C11orf68
RNF213
PXMP2
POLE
LOC102723996
ICOSLG
USP3
SUPT4H1
MNX1
ZNF639
COPS8
CCM2
CBWD5
TUBG1
RPS13
RETREG3
LAS1L
HSD11B1
ELOVL1
CDYL
CDC20
BDH1
PSMD4
OR6B2
NDUFA10
CBWD6
CBWD3
SLC2A4RG
MED23
LIME1
PAX5
WHAMM
RABL2A
FSD2
TRIM48
STMN3
RTEL1
FMO4
CWC25
TP63
TMEM79
SMG5
RBM42
MARS1
BBX
ARHGAP9
UBB
GUCY1A1
FOXK1
FAAP24
CEP89
SERPINB5